data_5OM3 # _model_server_result.job_id AmR6FxBAp9aV_FJgIb_Rvw _model_server_result.datetime_utc '2024-11-24 09:19:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5om3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5OM3 # _exptl.entry_id 5OM3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5OM3 _cell.length_a 84.321 _cell.length_b 84.321 _cell.length_c 98.156 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OM3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 296 n n C1 C2 PEG sing 297 n n C1 H11 PEG sing 298 n n C1 H12 PEG sing 299 n n O1 HO1 PEG sing 300 n n C2 O2 PEG sing 301 n n C2 H21 PEG sing 302 n n C2 H22 PEG sing 303 n n O2 C3 PEG sing 304 n n C3 C4 PEG sing 305 n n C3 H31 PEG sing 306 n n C3 H32 PEG sing 307 n n C4 O4 PEG sing 308 n n C4 H41 PEG sing 309 n n C4 H42 PEG sing 310 n n O4 HO4 PEG sing 311 n n # _atom_sites.entry_id 5OM3 _atom_sites.fract_transf_matrix[1][1] 0.011859 _atom_sites.fract_transf_matrix[1][2] 0.006847 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013694 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010188 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PEG A 1 401 1 PEG PEG . D 4 DXT B 1 501 1 DXT DXT . E 5 HOH A 1 601 164 HOH HOH . E 5 HOH A 2 602 106 HOH HOH . E 5 HOH A 3 603 82 HOH HOH . E 5 HOH A 4 604 190 HOH HOH . E 5 HOH A 5 605 51 HOH HOH . E 5 HOH A 6 606 60 HOH HOH . E 5 HOH A 7 607 135 HOH HOH . E 5 HOH A 8 608 25 HOH HOH . E 5 HOH A 9 609 49 HOH HOH . E 5 HOH A 10 610 88 HOH HOH . E 5 HOH A 11 611 192 HOH HOH . E 5 HOH A 12 612 80 HOH HOH . E 5 HOH A 13 613 110 HOH HOH . E 5 HOH A 14 614 64 HOH HOH . E 5 HOH A 15 615 145 HOH HOH . E 5 HOH A 16 616 45 HOH HOH . E 5 HOH A 17 617 91 HOH HOH . E 5 HOH A 18 618 79 HOH HOH . E 5 HOH A 19 619 166 HOH HOH . E 5 HOH A 20 620 59 HOH HOH . E 5 HOH A 21 621 85 HOH HOH . E 5 HOH A 22 622 121 HOH HOH . E 5 HOH A 23 623 71 HOH HOH . E 5 HOH A 24 624 125 HOH HOH . E 5 HOH A 25 625 55 HOH HOH . E 5 HOH A 26 626 70 HOH HOH . E 5 HOH A 27 627 92 HOH HOH . E 5 HOH A 28 628 151 HOH HOH . E 5 HOH A 29 629 12 HOH HOH . E 5 HOH A 30 630 31 HOH HOH . E 5 HOH A 31 631 28 HOH HOH . E 5 HOH A 32 632 83 HOH HOH . E 5 HOH A 33 633 160 HOH HOH . E 5 HOH A 34 634 77 HOH HOH . E 5 HOH A 35 635 78 HOH HOH . E 5 HOH A 36 636 202 HOH HOH . E 5 HOH A 37 637 2 HOH HOH . E 5 HOH A 38 638 39 HOH HOH . E 5 HOH A 39 639 20 HOH HOH . E 5 HOH A 40 640 13 HOH HOH . E 5 HOH A 41 641 15 HOH HOH . E 5 HOH A 42 642 113 HOH HOH . E 5 HOH A 43 643 167 HOH HOH . E 5 HOH A 44 644 3 HOH HOH . E 5 HOH A 45 645 146 HOH HOH . E 5 HOH A 46 646 205 HOH HOH . E 5 HOH A 47 647 87 HOH HOH . E 5 HOH A 48 648 42 HOH HOH . E 5 HOH A 49 649 8 HOH HOH . E 5 HOH A 50 650 94 HOH HOH . E 5 HOH A 51 651 58 HOH HOH . E 5 HOH A 52 652 9 HOH HOH . E 5 HOH A 53 653 48 HOH HOH . E 5 HOH A 54 654 68 HOH HOH . E 5 HOH A 55 655 173 HOH HOH . E 5 HOH A 56 656 4 HOH HOH . E 5 HOH A 57 657 129 HOH HOH . E 5 HOH A 58 658 204 HOH HOH . E 5 HOH A 59 659 17 HOH HOH . E 5 HOH A 60 660 67 HOH HOH . E 5 HOH A 61 661 134 HOH HOH . E 5 HOH A 62 662 1 HOH HOH . E 5 HOH A 63 663 57 HOH HOH . E 5 HOH A 64 664 16 HOH HOH . E 5 HOH A 65 665 37 HOH HOH . E 5 HOH A 66 666 44 HOH HOH . E 5 HOH A 67 667 193 HOH HOH . E 5 HOH A 68 668 154 HOH HOH . E 5 HOH A 69 669 115 HOH HOH . E 5 HOH A 70 670 21 HOH HOH . E 5 HOH A 71 671 40 HOH HOH . E 5 HOH A 72 672 43 HOH HOH . E 5 HOH A 73 673 187 HOH HOH . E 5 HOH A 74 674 213 HOH HOH . E 5 HOH A 75 675 194 HOH HOH . E 5 HOH A 76 676 102 HOH HOH . E 5 HOH A 77 677 23 HOH HOH . E 5 HOH A 78 678 84 HOH HOH . E 5 HOH A 79 679 96 HOH HOH . E 5 HOH A 80 680 27 HOH HOH . E 5 HOH A 81 681 34 HOH HOH . E 5 HOH A 82 682 14 HOH HOH . E 5 HOH A 83 683 81 HOH HOH . E 5 HOH A 84 684 112 HOH HOH . E 5 HOH A 85 685 26 HOH HOH . E 5 HOH A 86 686 74 HOH HOH . E 5 HOH A 87 687 107 HOH HOH . E 5 HOH A 88 688 89 HOH HOH . E 5 HOH A 89 689 116 HOH HOH . E 5 HOH A 90 690 29 HOH HOH . E 5 HOH A 91 691 149 HOH HOH . E 5 HOH A 92 692 143 HOH HOH . E 5 HOH A 93 693 86 HOH HOH . E 5 HOH A 94 694 156 HOH HOH . E 5 HOH A 95 695 177 HOH HOH . E 5 HOH A 96 696 35 HOH HOH . E 5 HOH A 97 697 214 HOH HOH . E 5 HOH A 98 698 120 HOH HOH . E 5 HOH A 99 699 178 HOH HOH . E 5 HOH A 100 700 66 HOH HOH . E 5 HOH A 101 701 152 HOH HOH . E 5 HOH A 102 702 41 HOH HOH . E 5 HOH A 103 703 93 HOH HOH . E 5 HOH A 104 704 65 HOH HOH . E 5 HOH A 105 705 169 HOH HOH . E 5 HOH A 106 706 50 HOH HOH . E 5 HOH A 107 707 209 HOH HOH . E 5 HOH A 108 708 148 HOH HOH . E 5 HOH A 109 709 18 HOH HOH . E 5 HOH A 110 710 73 HOH HOH . E 5 HOH A 111 711 61 HOH HOH . E 5 HOH A 112 712 99 HOH HOH . E 5 HOH A 113 713 95 HOH HOH . E 5 HOH A 114 714 114 HOH HOH . E 5 HOH A 115 715 53 HOH HOH . E 5 HOH A 116 716 159 HOH HOH . E 5 HOH A 117 717 144 HOH HOH . E 5 HOH A 118 718 170 HOH HOH . E 5 HOH A 119 719 54 HOH HOH . E 5 HOH A 120 720 172 HOH HOH . E 5 HOH A 121 721 47 HOH HOH . E 5 HOH A 122 722 133 HOH HOH . E 5 HOH A 123 723 30 HOH HOH . E 5 HOH A 124 724 104 HOH HOH . E 5 HOH A 125 725 210 HOH HOH . E 5 HOH A 126 726 132 HOH HOH . E 5 HOH A 127 727 188 HOH HOH . E 5 HOH A 128 728 141 HOH HOH . E 5 HOH A 129 729 127 HOH HOH . E 5 HOH A 130 730 105 HOH HOH . E 5 HOH A 131 731 186 HOH HOH . E 5 HOH A 132 732 176 HOH HOH . E 5 HOH A 133 733 181 HOH HOH . E 5 HOH A 134 734 200 HOH HOH . E 5 HOH A 135 735 153 HOH HOH . E 5 HOH A 136 736 126 HOH HOH . E 5 HOH A 137 737 179 HOH HOH . E 5 HOH A 138 738 165 HOH HOH . E 5 HOH A 139 739 130 HOH HOH . E 5 HOH A 140 740 189 HOH HOH . E 5 HOH A 141 741 191 HOH HOH . E 5 HOH A 142 742 131 HOH HOH . E 5 HOH A 143 743 72 HOH HOH . E 5 HOH A 144 744 140 HOH HOH . E 5 HOH A 145 745 128 HOH HOH . E 5 HOH A 146 746 184 HOH HOH . E 5 HOH A 147 747 150 HOH HOH . E 5 HOH A 148 748 211 HOH HOH . E 5 HOH A 149 749 109 HOH HOH . E 5 HOH A 150 750 163 HOH HOH . E 5 HOH A 151 751 119 HOH HOH . E 5 HOH A 152 752 203 HOH HOH . E 5 HOH A 153 753 69 HOH HOH . E 5 HOH A 154 754 199 HOH HOH . E 5 HOH A 155 755 90 HOH HOH . E 5 HOH A 156 756 75 HOH HOH . E 5 HOH A 157 757 108 HOH HOH . E 5 HOH A 158 758 185 HOH HOH . F 5 HOH B 1 601 198 HOH HOH . F 5 HOH B 2 602 206 HOH HOH . F 5 HOH B 3 603 38 HOH HOH . F 5 HOH B 4 604 22 HOH HOH . F 5 HOH B 5 605 62 HOH HOH . F 5 HOH B 6 606 10 HOH HOH . F 5 HOH B 7 607 7 HOH HOH . F 5 HOH B 8 608 24 HOH HOH . F 5 HOH B 9 609 97 HOH HOH . F 5 HOH B 10 610 212 HOH HOH . F 5 HOH B 11 611 137 HOH HOH . F 5 HOH B 12 612 196 HOH HOH . F 5 HOH B 13 613 32 HOH HOH . F 5 HOH B 14 614 56 HOH HOH . F 5 HOH B 15 615 33 HOH HOH . F 5 HOH B 16 616 208 HOH HOH . F 5 HOH B 17 617 182 HOH HOH . F 5 HOH B 18 618 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . C 3 -9.443 56.222 -38.352 1 36.76 ? C1 PEG 401 A 1 HETATM 2 O O1 PEG . . . C 3 -10.377 56.689 -37.362 1 46.42 ? O1 PEG 401 A 1 HETATM 3 C C2 PEG . . . C 3 -10.213 55.278 -39.31 1 40.86 ? C2 PEG 401 A 1 HETATM 4 O O2 PEG . . . C 3 -10.139 53.969 -38.81 1 36.49 ? O2 PEG 401 A 1 HETATM 5 C C3 PEG . . . C 3 -9.456 53.127 -39.679 1 38.52 ? C3 PEG 401 A 1 HETATM 6 C C4 PEG . . . C 3 -8.078 52.923 -39.124 1 33.42 ? C4 PEG 401 A 1 HETATM 7 O O4 PEG . . . C 3 -8.204 51.899 -38.207 1 36.88 ? O4 PEG 401 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #