data_5ON4 # _model_server_result.job_id nzW80KG4E8UUQoOsq2UHhQ _model_server_result.datetime_utc '2024-11-16 14:53:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5on4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":601}' # _entry.id 5ON4 # _exptl.entry_id 5ON4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ON4 _cell.length_a 86.69 _cell.length_b 94.121 _cell.length_c 129.545 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ON4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C FE FE . A FE 601 1_555 D NAL 9YK . A 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc2 C FE FE . A FE 601 1_555 D N 9YK . A 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc3 C FE FE . A FE 601 1_555 D O 9YK . A 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc4 C FE FE . A FE 601 1_555 D OAY 9YK . A 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc5 C FE FE . A FE 601 1_555 E O3 GOL . A GOL 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc6 G FE FE . B FE 601 1_555 H OAY 9YK . B 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc7 G FE FE . B FE 601 1_555 H N 9YK . B 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc8 G FE FE . B FE 601 1_555 H O 9YK . B 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc9 G FE FE . B FE 601 1_555 H NAL 9YK . B 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc10 G FE FE . B FE 601 1_555 H OBA 9YK . B 9YK 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ON4 _atom_sites.fract_transf_matrix[1][1] 0.011535 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007719 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE A 1 601 1 FE FE . D 3 9YK A 1 602 1 9YK BHZ . E 4 GOL A 1 603 1 GOL GOL . F 4 GOL A 1 604 4 GOL GOL . G 2 FE B 1 601 2 FE FE . H 3 9YK B 1 602 2 9YK BHZ . I 4 GOL B 1 603 2 GOL GOL . J 4 GOL B 1 604 3 GOL GOL . K 5 HOH A 1 701 6 HOH HOH . K 5 HOH A 2 702 55 HOH HOH . K 5 HOH A 3 703 81 HOH HOH . K 5 HOH A 4 704 38 HOH HOH . K 5 HOH A 5 705 24 HOH HOH . K 5 HOH A 6 706 37 HOH HOH . K 5 HOH A 7 707 88 HOH HOH . K 5 HOH A 8 708 80 HOH HOH . K 5 HOH A 9 709 53 HOH HOH . K 5 HOH A 10 710 54 HOH HOH . K 5 HOH A 11 711 36 HOH HOH . K 5 HOH A 12 712 10 HOH HOH . K 5 HOH A 13 713 17 HOH HOH . K 5 HOH A 14 714 83 HOH HOH . K 5 HOH A 15 715 8 HOH HOH . K 5 HOH A 16 716 15 HOH HOH . K 5 HOH A 17 717 86 HOH HOH . K 5 HOH A 18 718 71 HOH HOH . K 5 HOH A 19 719 42 HOH HOH . K 5 HOH A 20 720 13 HOH HOH . K 5 HOH A 21 721 67 HOH HOH . K 5 HOH A 22 722 63 HOH HOH . K 5 HOH A 23 723 74 HOH HOH . K 5 HOH A 24 724 47 HOH HOH . K 5 HOH A 25 725 2 HOH HOH . K 5 HOH A 26 726 61 HOH HOH . K 5 HOH A 27 727 7 HOH HOH . K 5 HOH A 28 728 79 HOH HOH . K 5 HOH A 29 729 62 HOH HOH . K 5 HOH A 30 730 11 HOH HOH . K 5 HOH A 31 731 3 HOH HOH . K 5 HOH A 32 732 43 HOH HOH . K 5 HOH A 33 733 21 HOH HOH . K 5 HOH A 34 734 31 HOH HOH . K 5 HOH A 35 735 27 HOH HOH . K 5 HOH A 36 736 32 HOH HOH . K 5 HOH A 37 737 20 HOH HOH . K 5 HOH A 38 738 89 HOH HOH . K 5 HOH A 39 739 69 HOH HOH . K 5 HOH A 40 740 25 HOH HOH . K 5 HOH A 41 741 85 HOH HOH . K 5 HOH A 42 742 33 HOH HOH . K 5 HOH A 43 743 58 HOH HOH . K 5 HOH A 44 744 59 HOH HOH . K 5 HOH A 45 745 40 HOH HOH . K 5 HOH A 46 746 70 HOH HOH . K 5 HOH A 47 747 48 HOH HOH . K 5 HOH A 48 748 23 HOH HOH . K 5 HOH A 49 749 41 HOH HOH . K 5 HOH A 50 750 26 HOH HOH . K 5 HOH A 51 751 39 HOH HOH . K 5 HOH A 52 752 60 HOH HOH . K 5 HOH A 53 753 66 HOH HOH . L 5 HOH B 1 701 73 HOH HOH . L 5 HOH B 2 702 77 HOH HOH . L 5 HOH B 3 703 19 HOH HOH . L 5 HOH B 4 704 52 HOH HOH . L 5 HOH B 5 705 44 HOH HOH . L 5 HOH B 6 706 16 HOH HOH . L 5 HOH B 7 707 78 HOH HOH . L 5 HOH B 8 708 90 HOH HOH . L 5 HOH B 9 709 28 HOH HOH . L 5 HOH B 10 710 18 HOH HOH . L 5 HOH B 11 711 34 HOH HOH . L 5 HOH B 12 712 14 HOH HOH . L 5 HOH B 13 713 49 HOH HOH . L 5 HOH B 14 714 84 HOH HOH . L 5 HOH B 15 715 5 HOH HOH . L 5 HOH B 16 716 50 HOH HOH . L 5 HOH B 17 717 12 HOH HOH . L 5 HOH B 18 718 1 HOH HOH . L 5 HOH B 19 719 65 HOH HOH . L 5 HOH B 20 720 30 HOH HOH . L 5 HOH B 21 721 57 HOH HOH . L 5 HOH B 22 722 22 HOH HOH . L 5 HOH B 23 723 64 HOH HOH . L 5 HOH B 24 724 9 HOH HOH . L 5 HOH B 25 725 82 HOH HOH . L 5 HOH B 26 726 4 HOH HOH . L 5 HOH B 27 727 87 HOH HOH . L 5 HOH B 28 728 75 HOH HOH . L 5 HOH B 29 729 51 HOH HOH . L 5 HOH B 30 730 76 HOH HOH . L 5 HOH B 31 731 56 HOH HOH . L 5 HOH B 32 732 35 HOH HOH . L 5 HOH B 33 733 45 HOH HOH . L 5 HOH B 34 734 68 HOH HOH . L 5 HOH B 35 735 46 HOH HOH . L 5 HOH B 36 736 29 HOH HOH . L 5 HOH B 37 737 72 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 36.516 _atom_site.Cartn_y 22.847 _atom_site.Cartn_z 20.659 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #