data_5OO6
#
_model_server_result.job_id            L8yvfi6ZRu0Nx2iro5GJUQ 
_model_server_result.datetime_utc      '2024-10-19 21:33:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oo6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"BA","auth_seq_id":201}' 
#
_entry.id    5OO6 
#
_exptl.entry_id    5OO6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              539.223 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.3 
_cell.angle_gamma         90.02 
_cell.entry_id            5OO6 
_cell.length_a            70.52 
_cell.length_b            112.99 
_cell.length_c            270.98 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OO6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
PISA trimeric 3 author_and_software_defined_assembly 3 
PISA trimeric 3 author_and_software_defined_assembly 4 
PISA trimeric 3 author_and_software_defined_assembly 5 
PISA trimeric 3 author_and_software_defined_assembly 6 
PISA trimeric 3 author_and_software_defined_assembly 7 
PISA trimeric 3 author_and_software_defined_assembly 8 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,Q,Y 1 1 
C,D,R,Z 2 1 
E,F,S,AA 3 1 
G,H,T,BA 4 1 
I,J,U,CA 5 1 
K,L,V,DA 6 1 
M,N,W,EA 7 1 
O,P,X,FA 8 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 Y N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
? 4 CA N N 
? 4 DA N N 
? 4 EA N N 
? 4 FA N N 
#
_chem_comp.formula           'C11 H20 N5 O14 P3' 
_chem_comp.formula_weight    539.223 
_chem_comp.id                MGT 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G MGT doub 235 n n 
PG O2G MGT sing 236 n n 
PG O3G MGT sing 237 n n 
PG O3B MGT sing 238 n n 
O2G HOG2 MGT sing 239 n n 
O3G HOG3 MGT sing 240 n n 
O3B PB MGT sing 241 n n 
PB O1B MGT doub 242 n n 
PB O2B MGT sing 243 n n 
PB O3A MGT sing 244 n n 
O2B HOB2 MGT sing 245 n n 
O3A PA MGT sing 246 n n 
PA O1A MGT doub 247 n n 
PA O2A MGT sing 248 n n 
PA O5' MGT sing 249 n n 
O2A HOA2 MGT sing 250 n n 
O5' C5' MGT sing 251 n n 
C5' C4' MGT sing 252 n n 
C5' "H5'1" MGT sing 253 n n 
C5' "H5'2" MGT sing 254 n n 
C4' O4' MGT sing 255 n n 
C4' C3' MGT sing 256 n n 
C4' H4' MGT sing 257 n n 
O4' C1' MGT sing 258 n n 
C3' O3' MGT sing 259 n n 
C3' C2' MGT sing 260 n n 
C3' H3' MGT sing 261 n n 
O3' HO3' MGT sing 262 n n 
C2' O2' MGT sing 263 n n 
C2' C1' MGT sing 264 n n 
C2' H2' MGT sing 265 n n 
O2' HO2' MGT sing 266 n n 
C1' N9 MGT sing 267 n n 
C1' H1' MGT sing 268 n n 
N9 C8 MGT sing 269 n n 
N9 C4 MGT sing 270 n n 
C8 N7 MGT sing 271 n n 
C8 H81 MGT sing 272 n n 
C8 H82 MGT sing 273 n n 
N7 CM7 MGT sing 274 n n 
N7 C5 MGT sing 275 n n 
CM7 HM71 MGT sing 276 n n 
CM7 HM72 MGT sing 277 n n 
CM7 HM73 MGT sing 278 n n 
C5 C6 MGT sing 279 n n 
C5 C4 MGT doub 280 n n 
C6 O6 MGT doub 281 n n 
C6 N1 MGT sing 282 n n 
N1 C2 MGT sing 283 n n 
N1 HN1 MGT sing 284 n n 
C2 N2 MGT sing 285 n n 
C2 N3 MGT doub 286 n n 
N2 HN21 MGT sing 287 n n 
N2 HN22 MGT sing 288 n n 
N3 C4 MGT sing 289 n n 
#
_atom_sites.entry_id                     5OO6 
_atom_sites.fract_transf_matrix[1][1]    0.01418 
_atom_sites.fract_transf_matrix[1][2]    0.000005 
_atom_sites.fract_transf_matrix[1][3]    0.000074 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00885 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00369 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Y 4 MGT B 1 201 180 MGT MGT . 
Z 4 MGT E 1 201 180 MGT MGT . 
AA 4 MGT H 1 201 180 MGT MGT . 
BA 4 MGT K 1 201 180 MGT MGT . 
CA 4 MGT N 1 201 180 MGT MGT . 
DA 4 MGT Q 1 201 180 MGT MGT . 
EA 4 MGT T 1 201 180 MGT MGT . 
FA 4 MGT W 1 201 180 MGT MGT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG MGT . . . BA 4 -105.148 -83.997 113.26 1 97.66 ? PG MGT 201 K 1 
HETATM 2 O O1G MGT . . . BA 4 -104.399 -83.048 114.17 1 97.43 ? O1G MGT 201 K 1 
HETATM 3 O O2G MGT . . . BA 4 -104.69 -83.978 111.816 1 90.76 ? O2G MGT 201 K 1 
HETATM 4 O O3G MGT . . . BA 4 -106.665 -83.963 113.402 1 89.45 ? O3G MGT 201 K 1 
HETATM 5 O O3B MGT . . . BA 4 -104.625 -85.426 113.814 1 89.52 ? O3B MGT 201 K 1 
HETATM 6 P PB MGT . . . BA 4 -105.196 -86.126 115.152 1 78.83 ? PB MGT 201 K 1 
HETATM 7 O O1B MGT . . . BA 4 -104.623 -87.517 115.189 1 77.12 ? O1B MGT 201 K 1 
HETATM 8 O O2B MGT . . . BA 4 -104.896 -85.195 116.292 1 79 ? O2B MGT 201 K 1 
HETATM 9 O O3A MGT . . . BA 4 -106.799 -86.181 114.883 1 72.01 ? O3A MGT 201 K 1 
HETATM 10 P PA MGT . . . BA 4 -107.816 -87.042 115.779 1 66.02 ? PA MGT 201 K 1 
HETATM 11 O O1A MGT . . . BA 4 -107.178 -87.118 117.112 1 77.19 ? O1A MGT 201 K 1 
HETATM 12 O O2A MGT . . . BA 4 -109.227 -86.532 115.683 1 68.31 ? O2A MGT 201 K 1 
HETATM 13 O O5' MGT . . . BA 4 -107.772 -88.542 115.218 1 69.28 ? O5' MGT 201 K 1 
HETATM 14 C C5' MGT . . . BA 4 -108.463 -89.619 115.859 1 71.1 ? C5' MGT 201 K 1 
HETATM 15 C C4' MGT . . . BA 4 -107.923 -90.95 115.34 1 71.22 ? C4' MGT 201 K 1 
HETATM 16 O O4' MGT . . . BA 4 -108.018 -90.961 113.912 1 73.96 ? O4' MGT 201 K 1 
HETATM 17 C C3' MGT . . . BA 4 -106.451 -91.155 115.691 1 72.29 ? C3' MGT 201 K 1 
HETATM 18 O O3' MGT . . . BA 4 -106.142 -92.538 115.947 1 67.38 ? O3' MGT 201 K 1 
HETATM 19 C C2' MGT . . . BA 4 -105.722 -90.665 114.458 1 74.11 ? C2' MGT 201 K 1 
HETATM 20 O O2' MGT . . . BA 4 -104.42 -91.243 114.315 1 71.82 ? O2' MGT 201 K 1 
HETATM 21 C C1' MGT . . . BA 4 -106.694 -91.04 113.342 1 77.75 ? C1' MGT 201 K 1 
HETATM 22 N N9 MGT . . . BA 4 -106.46 -90.193 112.134 1 79.72 ? N9 MGT 201 K 1 
HETATM 23 C C8 MGT . . . BA 4 -107.076 -88.865 112.15 1 81.19 ? C8 MGT 201 K 1 
HETATM 24 N N7 MGT . . . BA 4 -106.595 -88.439 110.845 1 81.62 ? N7 MGT 201 K 1 
HETATM 25 C CM7 MGT . . . BA 4 -107.032 -87.074 110.473 1 83.69 ? CM7 MGT 201 K 1 
HETATM 26 C C5 MGT . . . BA 4 -105.839 -89.317 110.198 1 83.86 ? C5 MGT 201 K 1 
HETATM 27 C C6 MGT . . . BA 4 -105.158 -89.3 108.881 1 85.08 ? C6 MGT 201 K 1 
HETATM 28 O O6 MGT . . . BA 4 -105.208 -88.311 108.112 1 82.33 ? O6 MGT 201 K 1 
HETATM 29 N N1 MGT . . . BA 4 -104.475 -90.421 108.562 1 84.14 ? N1 MGT 201 K 1 
HETATM 30 C C2 MGT . . . BA 4 -104.402 -91.51 109.382 1 82.68 ? C2 MGT 201 K 1 
HETATM 31 N N2 MGT . . . BA 4 -103.687 -92.587 108.978 1 81.41 ? N2 MGT 201 K 1 
HETATM 32 N N3 MGT . . . BA 4 -105.013 -91.574 110.605 1 82.54 ? N3 MGT 201 K 1 
HETATM 33 C C4 MGT . . . BA 4 -105.738 -90.517 111.058 1 82.38 ? C4 MGT 201 K 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    83 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           33 
#