data_5OON # _model_server_result.job_id gl9C1pkmc6ZVTMhsasVdPQ _model_server_result.datetime_utc '2024-11-04 22:57:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oon # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 5OON # _exptl.entry_id 5OON _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OON _cell.length_a 113.26 _cell.length_b 145 _cell.length_c 40.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OON _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 147 A CYS 138 1_555 C HG HG . A HG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc2 A O CYS 171 A CYS 162 1_555 B HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? metalc ? metalc3 A SG CYS 171 A CYS 162 1_555 B HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc4 A SG CYS 174 A CYS 165 1_555 B HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 398 n n C C2 TRS sing 399 n n C C3 TRS sing 400 n n C N TRS sing 401 n n C1 O1 TRS sing 402 n n C1 H11 TRS sing 403 n n C1 H12 TRS sing 404 n n C2 O2 TRS sing 405 n n C2 H21 TRS sing 406 n n C2 H22 TRS sing 407 n n C3 O3 TRS sing 408 n n C3 H31 TRS sing 409 n n C3 H32 TRS sing 410 n n N HN1 TRS sing 411 n n N HN2 TRS sing 412 n n N HN3 TRS sing 413 n n O1 HO1 TRS sing 414 n n O2 HO2 TRS sing 415 n n O3 HO3 TRS sing 416 n n # _atom_sites.entry_id 5OON _atom_sites.fract_transf_matrix[1][1] 0.008829 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006897 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024697 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HG A 1 301 1 HG HG . C 2 HG A 1 302 2 HG HG . D 3 TRS A 1 303 1 TRS TRS . E 4 OLC A 1 304 2 OLC OLC . F 4 OLC A 1 305 3 OLC OLC . G 5 HOH A 1 401 5 HOH HOH . G 5 HOH A 2 402 3 HOH HOH . G 5 HOH A 3 403 7 HOH HOH . G 5 HOH A 4 404 2 HOH HOH . G 5 HOH A 5 405 6 HOH HOH . G 5 HOH A 6 406 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 3 7.215 -0.606 20.016 0.59 52.36 ? C TRS 303 A 1 HETATM 2 C C1 TRS . . . D 3 5.92 0.027 19.51 0.59 52.55 ? C1 TRS 303 A 1 HETATM 3 C C2 TRS . . . D 3 7.524 -1.9 19.24 0.59 45.47 ? C2 TRS 303 A 1 HETATM 4 C C3 TRS . . . D 3 8.379 0.416 20.048 0.59 47.67 ? C3 TRS 303 A 1 HETATM 5 N N TRS . . . D 3 6.915 -1.084 21.364 0.59 46.39 ? N TRS 303 A 1 HETATM 6 O O1 TRS . . . D 3 4.839 -0.716 20.034 0.59 53.88 ? O1 TRS 303 A 1 HETATM 7 O O2 TRS . . . D 3 7.955 -1.7 17.915 0.59 37.94 ? O2 TRS 303 A 1 HETATM 8 O O3 TRS . . . D 3 8.079 1.585 20.802 0.59 47.51 ? O3 TRS 303 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #