data_5OP5 # _model_server_result.job_id lLSiLtV-nMOarZZzU9oFpA _model_server_result.datetime_utc '2024-11-22 10:14:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5op5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5OP5 # _exptl.entry_id 5OP5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 305.334 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.47 _cell.angle_gamma 90 _cell.entry_id 5OP5 _cell.length_a 44.94 _cell.length_b 65.79 _cell.length_c 54.31 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OP5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H15 N5 O' _chem_comp.formula_weight 305.334 _chem_comp.id 3FE _chem_comp.mon_nstd_flag . _chem_comp.name 3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N5 C17 3FE trip 1 n n C17 C3 3FE sing 2 n n C3 C2 3FE doub 3 n y C3 C4 3FE sing 4 n y C2 C1 3FE sing 5 n y C4 C5 3FE doub 6 n y C1 C6 3FE doub 7 n y C14 O1 3FE sing 8 n n C14 C13 3FE sing 9 n n C5 C6 3FE sing 10 n y C5 C7 3FE sing 11 n n O1 C15 3FE sing 12 n n C13 N4 3FE sing 13 n n C7 C8 3FE doub 14 n y C7 C10 3FE sing 15 n y C8 N1 3FE sing 16 n y C15 C16 3FE sing 17 n n N4 C16 3FE sing 18 n n N4 C11 3FE sing 19 n n C10 C11 3FE doub 20 n y C10 C9 3FE sing 21 n y N1 C9 3FE sing 22 n y C11 N2 3FE sing 23 n y C9 N3 3FE doub 24 n y N2 C12 3FE doub 25 n y N3 C12 3FE sing 26 n y C4 H1 3FE sing 27 n n C6 H2 3FE sing 28 n n C13 H3 3FE sing 29 n n C13 H4 3FE sing 30 n n C8 H5 3FE sing 31 n n C16 H6 3FE sing 32 n n C16 H7 3FE sing 33 n n C1 H8 3FE sing 34 n n C2 H9 3FE sing 35 n n N1 H10 3FE sing 36 n n C12 H11 3FE sing 37 n n C14 H12 3FE sing 38 n n C14 H13 3FE sing 39 n n C15 H14 3FE sing 40 n n C15 H15 3FE sing 41 n n # _atom_sites.entry_id 5OP5 _atom_sites.fract_transf_matrix[1][1] 0.022252 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004515 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0152 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3FE A 1 301 1271 3FE UNL . C 3 CL A 1 302 1272 CL CL . D 4 HOH A 1 401 2164 HOH HOH . D 4 HOH A 2 402 2009 HOH HOH . D 4 HOH A 3 403 2094 HOH HOH . D 4 HOH A 4 404 2106 HOH HOH . D 4 HOH A 5 405 2128 HOH HOH . D 4 HOH A 6 406 2132 HOH HOH . D 4 HOH A 7 407 2034 HOH HOH . D 4 HOH A 8 408 2198 HOH HOH . D 4 HOH A 9 409 2025 HOH HOH . D 4 HOH A 10 410 2047 HOH HOH . D 4 HOH A 11 411 2136 HOH HOH . D 4 HOH A 12 412 2104 HOH HOH . D 4 HOH A 13 413 2153 HOH HOH . D 4 HOH A 14 414 2149 HOH HOH . D 4 HOH A 15 415 2095 HOH HOH . D 4 HOH A 16 416 2032 HOH HOH . D 4 HOH A 17 417 2073 HOH HOH . D 4 HOH A 18 418 2021 HOH HOH . D 4 HOH A 19 419 2183 HOH HOH . D 4 HOH A 20 420 2185 HOH HOH . D 4 HOH A 21 421 2129 HOH HOH . D 4 HOH A 22 422 2200 HOH HOH . D 4 HOH A 23 423 2043 HOH HOH . D 4 HOH A 24 424 2119 HOH HOH . D 4 HOH A 25 425 2077 HOH HOH . D 4 HOH A 26 426 2163 HOH HOH . D 4 HOH A 27 427 2081 HOH HOH . D 4 HOH A 28 428 2207 HOH HOH . D 4 HOH A 29 429 2191 HOH HOH . D 4 HOH A 30 430 2168 HOH HOH . D 4 HOH A 31 431 2187 HOH HOH . D 4 HOH A 32 432 2162 HOH HOH . D 4 HOH A 33 433 2148 HOH HOH . D 4 HOH A 34 434 2008 HOH HOH . D 4 HOH A 35 435 2055 HOH HOH . D 4 HOH A 36 436 2019 HOH HOH . D 4 HOH A 37 437 2205 HOH HOH . D 4 HOH A 38 438 2130 HOH HOH . D 4 HOH A 39 439 2067 HOH HOH . D 4 HOH A 40 440 2186 HOH HOH . D 4 HOH A 41 441 2098 HOH HOH . D 4 HOH A 42 442 2090 HOH HOH . D 4 HOH A 43 443 2131 HOH HOH . D 4 HOH A 44 444 2175 HOH HOH . D 4 HOH A 45 445 2154 HOH HOH . D 4 HOH A 46 446 2001 HOH HOH . D 4 HOH A 47 447 2038 HOH HOH . D 4 HOH A 48 448 2172 HOH HOH . D 4 HOH A 49 449 2167 HOH HOH . D 4 HOH A 50 450 2194 HOH HOH . D 4 HOH A 51 451 2173 HOH HOH . D 4 HOH A 52 452 2042 HOH HOH . D 4 HOH A 53 453 2193 HOH HOH . D 4 HOH A 54 454 2142 HOH HOH . D 4 HOH A 55 455 2063 HOH HOH . D 4 HOH A 56 456 2036 HOH HOH . D 4 HOH A 57 457 2121 HOH HOH . D 4 HOH A 58 458 2134 HOH HOH . D 4 HOH A 59 459 2100 HOH HOH . D 4 HOH A 60 460 2161 HOH HOH . D 4 HOH A 61 461 2176 HOH HOH . D 4 HOH A 62 462 2192 HOH HOH . D 4 HOH A 63 463 2011 HOH HOH . D 4 HOH A 64 464 2072 HOH HOH . D 4 HOH A 65 465 2050 HOH HOH . D 4 HOH A 66 466 2029 HOH HOH . D 4 HOH A 67 467 2217 HOH HOH . D 4 HOH A 68 468 2093 HOH HOH . D 4 HOH A 69 469 2048 HOH HOH . D 4 HOH A 70 470 2216 HOH HOH . D 4 HOH A 71 471 2102 HOH HOH . D 4 HOH A 72 472 2096 HOH HOH . D 4 HOH A 73 473 2118 HOH HOH . D 4 HOH A 74 474 2035 HOH HOH . D 4 HOH A 75 475 2059 HOH HOH . D 4 HOH A 76 476 2182 HOH HOH . D 4 HOH A 77 477 2206 HOH HOH . D 4 HOH A 78 478 2062 HOH HOH . D 4 HOH A 79 479 2113 HOH HOH . D 4 HOH A 80 480 2114 HOH HOH . D 4 HOH A 81 481 2079 HOH HOH . D 4 HOH A 82 482 2213 HOH HOH . D 4 HOH A 83 483 2065 HOH HOH . D 4 HOH A 84 484 2112 HOH HOH . D 4 HOH A 85 485 2160 HOH HOH . D 4 HOH A 86 486 2097 HOH HOH . D 4 HOH A 87 487 2010 HOH HOH . D 4 HOH A 88 488 2141 HOH HOH . D 4 HOH A 89 489 2123 HOH HOH . D 4 HOH A 90 490 2110 HOH HOH . D 4 HOH A 91 491 2013 HOH HOH . D 4 HOH A 92 492 2045 HOH HOH . D 4 HOH A 93 493 2086 HOH HOH . D 4 HOH A 94 494 2111 HOH HOH . D 4 HOH A 95 495 2190 HOH HOH . D 4 HOH A 96 496 2076 HOH HOH . D 4 HOH A 97 497 2171 HOH HOH . D 4 HOH A 98 498 2080 HOH HOH . D 4 HOH A 99 499 2107 HOH HOH . D 4 HOH A 100 500 2159 HOH HOH . D 4 HOH A 101 501 2210 HOH HOH . D 4 HOH A 102 502 2083 HOH HOH . D 4 HOH A 103 503 2023 HOH HOH . D 4 HOH A 104 504 2064 HOH HOH . D 4 HOH A 105 505 2135 HOH HOH . D 4 HOH A 106 506 2046 HOH HOH . D 4 HOH A 107 507 2069 HOH HOH . D 4 HOH A 108 508 2092 HOH HOH . D 4 HOH A 109 509 2082 HOH HOH . D 4 HOH A 110 510 2203 HOH HOH . D 4 HOH A 111 511 2037 HOH HOH . D 4 HOH A 112 512 2196 HOH HOH . D 4 HOH A 113 513 2151 HOH HOH . D 4 HOH A 114 514 2031 HOH HOH . D 4 HOH A 115 515 2074 HOH HOH . D 4 HOH A 116 516 2188 HOH HOH . D 4 HOH A 117 517 2070 HOH HOH . D 4 HOH A 118 518 2137 HOH HOH . D 4 HOH A 119 519 2078 HOH HOH . D 4 HOH A 120 520 2051 HOH HOH . D 4 HOH A 121 521 2146 HOH HOH . D 4 HOH A 122 522 2144 HOH HOH . D 4 HOH A 123 523 2189 HOH HOH . D 4 HOH A 124 524 2147 HOH HOH . D 4 HOH A 125 525 2179 HOH HOH . D 4 HOH A 126 526 2054 HOH HOH . D 4 HOH A 127 527 2024 HOH HOH . D 4 HOH A 128 528 2084 HOH HOH . D 4 HOH A 129 529 2066 HOH HOH . D 4 HOH A 130 530 2140 HOH HOH . D 4 HOH A 131 531 2212 HOH HOH . D 4 HOH A 132 532 2060 HOH HOH . D 4 HOH A 133 533 2052 HOH HOH . D 4 HOH A 134 534 2150 HOH HOH . D 4 HOH A 135 535 2088 HOH HOH . D 4 HOH A 136 536 2219 HOH HOH . D 4 HOH A 137 537 2057 HOH HOH . D 4 HOH A 138 538 2089 HOH HOH . D 4 HOH A 139 539 2208 HOH HOH . D 4 HOH A 140 540 2091 HOH HOH . D 4 HOH A 141 541 2174 HOH HOH . D 4 HOH A 142 542 2075 HOH HOH . D 4 HOH A 143 543 2184 HOH HOH . D 4 HOH A 144 544 2105 HOH HOH . D 4 HOH A 145 545 2214 HOH HOH . D 4 HOH A 146 546 2087 HOH HOH . D 4 HOH A 147 547 2143 HOH HOH . D 4 HOH A 148 548 2165 HOH HOH . D 4 HOH A 149 549 2109 HOH HOH . D 4 HOH A 150 550 2195 HOH HOH . D 4 HOH A 151 551 2204 HOH HOH . D 4 HOH A 152 552 2039 HOH HOH . D 4 HOH A 153 553 2071 HOH HOH . D 4 HOH A 154 554 2139 HOH HOH . D 4 HOH A 155 555 2197 HOH HOH . D 4 HOH A 156 556 2101 HOH HOH . D 4 HOH A 157 557 2015 HOH HOH . D 4 HOH A 158 558 2068 HOH HOH . D 4 HOH A 159 559 2178 HOH HOH . D 4 HOH A 160 560 2058 HOH HOH . D 4 HOH A 161 561 2215 HOH HOH . D 4 HOH A 162 562 2003 HOH HOH . D 4 HOH A 163 563 2061 HOH HOH . D 4 HOH A 164 564 2218 HOH HOH . D 4 HOH A 165 565 2170 HOH HOH . D 4 HOH A 166 566 2202 HOH HOH . D 4 HOH A 167 567 2155 HOH HOH . D 4 HOH A 168 568 2030 HOH HOH . D 4 HOH A 169 569 2201 HOH HOH . D 4 HOH A 170 570 2028 HOH HOH . D 4 HOH A 171 571 2033 HOH HOH . D 4 HOH A 172 572 2016 HOH HOH . D 4 HOH A 173 573 2199 HOH HOH . D 4 HOH A 174 574 2211 HOH HOH . D 4 HOH A 175 575 2180 HOH HOH . D 4 HOH A 176 576 2156 HOH HOH . D 4 HOH A 177 577 2056 HOH HOH . D 4 HOH A 178 578 2103 HOH HOH . D 4 HOH A 179 579 2026 HOH HOH . D 4 HOH A 180 580 2122 HOH HOH . D 4 HOH A 181 581 2166 HOH HOH . D 4 HOH A 182 582 2020 HOH HOH . D 4 HOH A 183 583 2044 HOH HOH . D 4 HOH A 184 584 2116 HOH HOH . D 4 HOH A 185 585 2027 HOH HOH . D 4 HOH A 186 586 2120 HOH HOH . D 4 HOH A 187 587 2115 HOH HOH . D 4 HOH A 188 588 2145 HOH HOH . D 4 HOH A 189 589 2169 HOH HOH . D 4 HOH A 190 590 2157 HOH HOH . D 4 HOH A 191 591 2099 HOH HOH . D 4 HOH A 192 592 2014 HOH HOH . D 4 HOH A 193 593 2017 HOH HOH . D 4 HOH A 194 594 2041 HOH HOH . D 4 HOH A 195 595 2007 HOH HOH . D 4 HOH A 196 596 2125 HOH HOH . D 4 HOH A 197 597 2181 HOH HOH . D 4 HOH A 198 598 2085 HOH HOH . D 4 HOH A 199 599 2126 HOH HOH . D 4 HOH A 200 600 2177 HOH HOH . D 4 HOH A 201 601 2158 HOH HOH . D 4 HOH A 202 602 2002 HOH HOH . D 4 HOH A 203 603 2127 HOH HOH . D 4 HOH A 204 604 2049 HOH HOH . D 4 HOH A 205 605 2152 HOH HOH . D 4 HOH A 206 606 2133 HOH HOH . D 4 HOH A 207 607 2018 HOH HOH . D 4 HOH A 208 608 2138 HOH HOH . D 4 HOH A 209 609 2209 HOH HOH . D 4 HOH A 210 610 2117 HOH HOH . D 4 HOH A 211 611 2053 HOH HOH . D 4 HOH A 212 612 2108 HOH HOH . D 4 HOH A 213 613 2022 HOH HOH . D 4 HOH A 214 614 2124 HOH HOH . D 4 HOH A 215 615 2004 HOH HOH . D 4 HOH A 216 616 2012 HOH HOH . D 4 HOH A 217 617 2040 HOH HOH . D 4 HOH A 218 618 2006 HOH HOH . D 4 HOH A 219 619 2005 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 3FE . . . B 2 4.147 -1.716 20.246 1 34.58 ? N3 3FE 301 A 1 HETATM 2 C C4 3FE . . . B 2 8.095 -4.506 16.819 1 35.39 ? C4 3FE 301 A 1 HETATM 3 N N2 3FE . . . B 2 2.832 -3.432 19.553 1 38.74 ? N2 3FE 301 A 1 HETATM 4 C C7 3FE . . . B 2 6.295 -3.374 18.103 1 36.55 ? C7 3FE 301 A 1 HETATM 5 C C6 3FE . . . B 2 5.854 -4.58 16.028 1 39.78 ? C6 3FE 301 A 1 HETATM 6 C C9 3FE . . . B 2 5.188 -2.141 19.533 1 33.7 ? C9 3FE 301 A 1 HETATM 7 C C13 3FE . . . B 2 2.087 -5.359 17.887 1 42.76 ? C13 3FE 301 A 1 HETATM 8 C C8 3FE . . . B 2 7.106 -2.328 18.546 1 35.73 ? C8 3FE 301 A 1 HETATM 9 N N5 3FE . . . B 2 11.056 -5.714 15.582 1 43.91 ? N5 3FE 301 A 1 HETATM 10 C C16 3FE . . . B 2 4.539 -6.059 17.961 1 42.19 ? C16 3FE 301 A 1 HETATM 11 C C1 3FE . . . B 2 6.29 -5.335 14.915 1 41.39 ? C1 3FE 301 A 1 HETATM 12 C C2 3FE . . . B 2 7.64 -5.666 14.753 1 37.63 ? C2 3FE 301 A 1 HETATM 13 C C3 3FE . . . B 2 8.543 -5.25 15.722 1 39.35 ? C3 3FE 301 A 1 HETATM 14 C C5 3FE . . . B 2 6.768 -4.252 17.027 1 36.27 ? C5 3FE 301 A 1 HETATM 15 N N1 3FE . . . B 2 6.398 -1.613 19.403 1 33.26 ? N1 3FE 301 A 1 HETATM 16 C C10 3FE . . . B 2 5.054 -3.247 18.721 1 33.11 ? C10 3FE 301 A 1 HETATM 17 C C11 3FE . . . B 2 3.814 -3.885 18.749 1 36.18 ? C11 3FE 301 A 1 HETATM 18 C C12 3FE . . . B 2 2.979 -2.338 20.297 1 33.66 ? C12 3FE 301 A 1 HETATM 19 N N4 3FE . . . B 2 3.495 -5.023 18.081 1 37.72 ? N4 3FE 301 A 1 HETATM 20 C C14 3FE . . . B 2 1.983 -6.415 16.769 1 44.56 ? C14 3FE 301 A 1 HETATM 21 O O1 3FE . . . B 2 2.802 -7.506 16.947 1 41.83 ? O1 3FE 301 A 1 HETATM 22 C C15 3FE . . . B 2 4.188 -7.206 17.009 1 44.07 ? C15 3FE 301 A 1 HETATM 23 C C17 3FE . . . B 2 9.931 -5.529 15.62 1 38.79 ? C17 3FE 301 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #