data_5OPU # _model_server_result.job_id J4L44Ndim3MpVXSA4Be70A _model_server_result.datetime_utc '2024-11-23 12:20:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5opu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5OPU # _exptl.entry_id 5OPU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 248.283 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-azanyl-4-(3-methylphenyl)-1~{H}-pyrrolo[2,3-b]pyridine-3-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.74 _cell.angle_gamma 90 _cell.entry_id 5OPU _cell.length_a 45 _cell.length_b 66 _cell.length_c 54.15 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OPU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H12 N4' _chem_comp.formula_weight 248.283 _chem_comp.id A3K _chem_comp.mon_nstd_flag . _chem_comp.name 6-azanyl-4-(3-methylphenyl)-1~{H}-pyrrolo[2,3-b]pyridine-3-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C23 A3K sing 1 n n C23 C24 A3K doub 2 n y C23 C21 A3K sing 3 n y C24 C26 A3K sing 4 n y C21 C30 A3K doub 5 n y N08 C09 A3K trip 6 n n C26 C28 A3K doub 7 n y C09 C12 A3K sing 8 n n C30 C28 A3K sing 9 n y C30 C31 A3K sing 10 n n C12 C15 A3K sing 11 n y C12 C10 A3K doub 12 n y C31 C15 A3K doub 13 n y C31 C19 A3K sing 14 n y C15 C16 A3K sing 15 n y C10 N13 A3K sing 16 n y C19 C18 A3K doub 17 n y N13 C16 A3K sing 18 n y C16 N17 A3K doub 19 n y C18 N17 A3K sing 20 n y C18 N05 A3K sing 21 n n C01 H1 A3K sing 22 n n C01 H2 A3K sing 23 n n C01 H3 A3K sing 24 n n C21 H4 A3K sing 25 n n C24 H5 A3K sing 26 n n C26 H6 A3K sing 27 n n C28 H7 A3K sing 28 n n C19 H8 A3K sing 29 n n N05 H9 A3K sing 30 n n N05 H10 A3K sing 31 n n N13 H11 A3K sing 32 n n C10 H12 A3K sing 33 n n # _atom_sites.entry_id 5OPU _atom_sites.fract_transf_matrix[1][1] 0.022222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004618 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015152 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018862 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A3K A 1 301 1272 A3K UNL . C 3 CL A 1 302 1273 CL CL . D 4 HOH A 1 401 2196 HOH HOH . D 4 HOH A 2 402 2235 HOH HOH . D 4 HOH A 3 403 2222 HOH HOH . D 4 HOH A 4 404 2188 HOH HOH . D 4 HOH A 5 405 2208 HOH HOH . D 4 HOH A 6 406 2207 HOH HOH . D 4 HOH A 7 407 2179 HOH HOH . D 4 HOH A 8 408 2180 HOH HOH . D 4 HOH A 9 409 2146 HOH HOH . D 4 HOH A 10 410 2132 HOH HOH . D 4 HOH A 11 411 2047 HOH HOH . D 4 HOH A 12 412 2119 HOH HOH . D 4 HOH A 13 413 2091 HOH HOH . D 4 HOH A 14 414 2042 HOH HOH . D 4 HOH A 15 415 2182 HOH HOH . D 4 HOH A 16 416 2210 HOH HOH . D 4 HOH A 17 417 2121 HOH HOH . D 4 HOH A 18 418 2147 HOH HOH . D 4 HOH A 19 419 2110 HOH HOH . D 4 HOH A 20 420 2100 HOH HOH . D 4 HOH A 21 421 2123 HOH HOH . D 4 HOH A 22 422 2066 HOH HOH . D 4 HOH A 23 423 2142 HOH HOH . D 4 HOH A 24 424 2183 HOH HOH . D 4 HOH A 25 425 2026 HOH HOH . D 4 HOH A 26 426 2130 HOH HOH . D 4 HOH A 27 427 2073 HOH HOH . D 4 HOH A 28 428 2014 HOH HOH . D 4 HOH A 29 429 2089 HOH HOH . D 4 HOH A 30 430 2103 HOH HOH . D 4 HOH A 31 431 2094 HOH HOH . D 4 HOH A 32 432 2022 HOH HOH . D 4 HOH A 33 433 2166 HOH HOH . D 4 HOH A 34 434 2082 HOH HOH . D 4 HOH A 35 435 2053 HOH HOH . D 4 HOH A 36 436 2165 HOH HOH . D 4 HOH A 37 437 2158 HOH HOH . D 4 HOH A 38 438 2135 HOH HOH . D 4 HOH A 39 439 2096 HOH HOH . D 4 HOH A 40 440 2027 HOH HOH . D 4 HOH A 41 441 2105 HOH HOH . D 4 HOH A 42 442 2150 HOH HOH . D 4 HOH A 43 443 2010 HOH HOH . D 4 HOH A 44 444 2019 HOH HOH . D 4 HOH A 45 445 2002 HOH HOH . D 4 HOH A 46 446 2167 HOH HOH . D 4 HOH A 47 447 2064 HOH HOH . D 4 HOH A 48 448 2155 HOH HOH . D 4 HOH A 49 449 2036 HOH HOH . D 4 HOH A 50 450 2069 HOH HOH . D 4 HOH A 51 451 2111 HOH HOH . D 4 HOH A 52 452 2079 HOH HOH . D 4 HOH A 53 453 2181 HOH HOH . D 4 HOH A 54 454 2140 HOH HOH . D 4 HOH A 55 455 2003 HOH HOH . D 4 HOH A 56 456 2001 HOH HOH . D 4 HOH A 57 457 2107 HOH HOH . D 4 HOH A 58 458 2012 HOH HOH . D 4 HOH A 59 459 2074 HOH HOH . D 4 HOH A 60 460 2134 HOH HOH . D 4 HOH A 61 461 2128 HOH HOH . D 4 HOH A 62 462 2017 HOH HOH . D 4 HOH A 63 463 2081 HOH HOH . D 4 HOH A 64 464 2141 HOH HOH . D 4 HOH A 65 465 2184 HOH HOH . D 4 HOH A 66 466 2099 HOH HOH . D 4 HOH A 67 467 2093 HOH HOH . D 4 HOH A 68 468 2175 HOH HOH . D 4 HOH A 69 469 2046 HOH HOH . D 4 HOH A 70 470 2226 HOH HOH . D 4 HOH A 71 471 2050 HOH HOH . D 4 HOH A 72 472 2177 HOH HOH . D 4 HOH A 73 473 2006 HOH HOH . D 4 HOH A 74 474 2169 HOH HOH . D 4 HOH A 75 475 2025 HOH HOH . D 4 HOH A 76 476 2223 HOH HOH . D 4 HOH A 77 477 2106 HOH HOH . D 4 HOH A 78 478 2116 HOH HOH . D 4 HOH A 79 479 2098 HOH HOH . D 4 HOH A 80 480 2174 HOH HOH . D 4 HOH A 81 481 2186 HOH HOH . D 4 HOH A 82 482 2016 HOH HOH . D 4 HOH A 83 483 2127 HOH HOH . D 4 HOH A 84 484 2236 HOH HOH . D 4 HOH A 85 485 2076 HOH HOH . D 4 HOH A 86 486 2234 HOH HOH . D 4 HOH A 87 487 2152 HOH HOH . D 4 HOH A 88 488 2084 HOH HOH . D 4 HOH A 89 489 2021 HOH HOH . D 4 HOH A 90 490 2039 HOH HOH . D 4 HOH A 91 491 2092 HOH HOH . D 4 HOH A 92 492 2065 HOH HOH . D 4 HOH A 93 493 2157 HOH HOH . D 4 HOH A 94 494 2040 HOH HOH . D 4 HOH A 95 495 2007 HOH HOH . D 4 HOH A 96 496 2020 HOH HOH . D 4 HOH A 97 497 2115 HOH HOH . D 4 HOH A 98 498 2122 HOH HOH . D 4 HOH A 99 499 2004 HOH HOH . D 4 HOH A 100 500 2206 HOH HOH . D 4 HOH A 101 501 2113 HOH HOH . D 4 HOH A 102 502 2139 HOH HOH . D 4 HOH A 103 503 2136 HOH HOH . D 4 HOH A 104 504 2149 HOH HOH . D 4 HOH A 105 505 2063 HOH HOH . D 4 HOH A 106 506 2045 HOH HOH . D 4 HOH A 107 507 2129 HOH HOH . D 4 HOH A 108 508 2005 HOH HOH . D 4 HOH A 109 509 2052 HOH HOH . D 4 HOH A 110 510 2153 HOH HOH . D 4 HOH A 111 511 2032 HOH HOH . D 4 HOH A 112 512 2055 HOH HOH . D 4 HOH A 113 513 2051 HOH HOH . D 4 HOH A 114 514 2013 HOH HOH . D 4 HOH A 115 515 2195 HOH HOH . D 4 HOH A 116 516 2041 HOH HOH . D 4 HOH A 117 517 2109 HOH HOH . D 4 HOH A 118 518 2203 HOH HOH . D 4 HOH A 119 519 2120 HOH HOH . D 4 HOH A 120 520 2009 HOH HOH . D 4 HOH A 121 521 2023 HOH HOH . D 4 HOH A 122 522 2043 HOH HOH . D 4 HOH A 123 523 2018 HOH HOH . D 4 HOH A 124 524 2015 HOH HOH . D 4 HOH A 125 525 2044 HOH HOH . D 4 HOH A 126 526 2029 HOH HOH . D 4 HOH A 127 527 2033 HOH HOH . D 4 HOH A 128 528 2161 HOH HOH . D 4 HOH A 129 529 2144 HOH HOH . D 4 HOH A 130 530 2071 HOH HOH . D 4 HOH A 131 531 2133 HOH HOH . D 4 HOH A 132 532 2138 HOH HOH . D 4 HOH A 133 533 2030 HOH HOH . D 4 HOH A 134 534 2048 HOH HOH . D 4 HOH A 135 535 2056 HOH HOH . D 4 HOH A 136 536 2049 HOH HOH . D 4 HOH A 137 537 2059 HOH HOH . D 4 HOH A 138 538 2104 HOH HOH . D 4 HOH A 139 539 2054 HOH HOH . D 4 HOH A 140 540 2067 HOH HOH . D 4 HOH A 141 541 2176 HOH HOH . D 4 HOH A 142 542 2212 HOH HOH . D 4 HOH A 143 543 2218 HOH HOH . D 4 HOH A 144 544 2078 HOH HOH . D 4 HOH A 145 545 2008 HOH HOH . D 4 HOH A 146 546 2178 HOH HOH . D 4 HOH A 147 547 2097 HOH HOH . D 4 HOH A 148 548 2060 HOH HOH . D 4 HOH A 149 549 2159 HOH HOH . D 4 HOH A 150 550 2225 HOH HOH . D 4 HOH A 151 551 2162 HOH HOH . D 4 HOH A 152 552 2061 HOH HOH . D 4 HOH A 153 553 2037 HOH HOH . D 4 HOH A 154 554 2038 HOH HOH . D 4 HOH A 155 555 2117 HOH HOH . D 4 HOH A 156 556 2160 HOH HOH . D 4 HOH A 157 557 2145 HOH HOH . D 4 HOH A 158 558 2213 HOH HOH . D 4 HOH A 159 559 2118 HOH HOH . D 4 HOH A 160 560 2058 HOH HOH . D 4 HOH A 161 561 2185 HOH HOH . D 4 HOH A 162 562 2171 HOH HOH . D 4 HOH A 163 563 2011 HOH HOH . D 4 HOH A 164 564 2072 HOH HOH . D 4 HOH A 165 565 2229 HOH HOH . D 4 HOH A 166 566 2137 HOH HOH . D 4 HOH A 167 567 2187 HOH HOH . D 4 HOH A 168 568 2154 HOH HOH . D 4 HOH A 169 569 2077 HOH HOH . D 4 HOH A 170 570 2156 HOH HOH . D 4 HOH A 171 571 2200 HOH HOH . D 4 HOH A 172 572 2062 HOH HOH . D 4 HOH A 173 573 2232 HOH HOH . D 4 HOH A 174 574 2124 HOH HOH . D 4 HOH A 175 575 2090 HOH HOH . D 4 HOH A 176 576 2035 HOH HOH . D 4 HOH A 177 577 2148 HOH HOH . D 4 HOH A 178 578 2125 HOH HOH . D 4 HOH A 179 579 2164 HOH HOH . D 4 HOH A 180 580 2194 HOH HOH . D 4 HOH A 181 581 2199 HOH HOH . D 4 HOH A 182 582 2221 HOH HOH . D 4 HOH A 183 583 2151 HOH HOH . D 4 HOH A 184 584 2211 HOH HOH . D 4 HOH A 185 585 2108 HOH HOH . D 4 HOH A 186 586 2233 HOH HOH . D 4 HOH A 187 587 2217 HOH HOH . D 4 HOH A 188 588 2170 HOH HOH . D 4 HOH A 189 589 2034 HOH HOH . D 4 HOH A 190 590 2231 HOH HOH . D 4 HOH A 191 591 2173 HOH HOH . D 4 HOH A 192 592 2220 HOH HOH . D 4 HOH A 193 593 2201 HOH HOH . D 4 HOH A 194 594 2085 HOH HOH . D 4 HOH A 195 595 2131 HOH HOH . D 4 HOH A 196 596 2168 HOH HOH . D 4 HOH A 197 597 2172 HOH HOH . D 4 HOH A 198 598 2070 HOH HOH . D 4 HOH A 199 599 2209 HOH HOH . D 4 HOH A 200 600 2114 HOH HOH . D 4 HOH A 201 601 2024 HOH HOH . D 4 HOH A 202 602 2163 HOH HOH . D 4 HOH A 203 603 2230 HOH HOH . D 4 HOH A 204 604 2224 HOH HOH . D 4 HOH A 205 605 2057 HOH HOH . D 4 HOH A 206 606 2193 HOH HOH . D 4 HOH A 207 607 2068 HOH HOH . D 4 HOH A 208 608 2191 HOH HOH . D 4 HOH A 209 609 2228 HOH HOH . D 4 HOH A 210 610 2216 HOH HOH . D 4 HOH A 211 611 2204 HOH HOH . D 4 HOH A 212 612 2083 HOH HOH . D 4 HOH A 213 613 2086 HOH HOH . D 4 HOH A 214 614 2095 HOH HOH . D 4 HOH A 215 615 2202 HOH HOH . D 4 HOH A 216 616 2189 HOH HOH . D 4 HOH A 217 617 2197 HOH HOH . D 4 HOH A 218 618 2143 HOH HOH . D 4 HOH A 219 619 2028 HOH HOH . D 4 HOH A 220 620 2087 HOH HOH . D 4 HOH A 221 621 2102 HOH HOH . D 4 HOH A 222 622 2088 HOH HOH . D 4 HOH A 223 623 2126 HOH HOH . D 4 HOH A 224 624 2080 HOH HOH . D 4 HOH A 225 625 2101 HOH HOH . D 4 HOH A 226 626 2219 HOH HOH . D 4 HOH A 227 627 2205 HOH HOH . D 4 HOH A 228 628 2075 HOH HOH . D 4 HOH A 229 629 2190 HOH HOH . D 4 HOH A 230 630 2192 HOH HOH . D 4 HOH A 231 631 2112 HOH HOH . D 4 HOH A 232 632 2031 HOH HOH . D 4 HOH A 233 633 2227 HOH HOH . D 4 HOH A 234 634 2214 HOH HOH . D 4 HOH A 235 635 2198 HOH HOH . D 4 HOH A 236 636 2215 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 A3K . . . B 2 5.705 -5.872 13.822 1 26.54 ? C01 A3K 301 A 1 HETATM 2 C C23 A3K . . . B 2 5.218 -6.099 15.286 1 29.43 ? C23 A3K 301 A 1 HETATM 3 C C21 A3K . . . B 2 5.153 -5.001 16.175 1 27.01 ? C21 A3K 301 A 1 HETATM 4 C C24 A3K . . . B 2 4.854 -7.354 15.661 1 27.35 ? C24 A3K 301 A 1 HETATM 5 C C26 A3K . . . B 2 4.405 -7.615 16.994 1 28.41 ? C26 A3K 301 A 1 HETATM 6 C C28 A3K . . . B 2 4.308 -6.56 17.844 1 28.56 ? C28 A3K 301 A 1 HETATM 7 C C30 A3K . . . B 2 4.707 -5.278 17.535 1 28.67 ? C30 A3K 301 A 1 HETATM 8 C C31 A3K . . . B 2 4.608 -4.094 18.413 1 25.3 ? C31 A3K 301 A 1 HETATM 9 C C15 A3K . . . B 2 5.639 -3.115 18.589 1 26.51 ? C15 A3K 301 A 1 HETATM 10 C C19 A3K . . . B 2 3.379 -3.908 18.983 1 27.53 ? C19 A3K 301 A 1 HETATM 11 C C18 A3K . . . B 2 3.271 -2.695 19.8 1 27.23 ? C18 A3K 301 A 1 HETATM 12 N N05 A3K . . . B 2 2.078 -2.504 20.358 1 30.44 ? N05 A3K 301 A 1 HETATM 13 N N17 A3K . . . B 2 4.195 -1.772 19.954 1 27.84 ? N17 A3K 301 A 1 HETATM 14 C C16 A3K . . . B 2 5.42 -1.977 19.414 1 25.67 ? C16 A3K 301 A 1 HETATM 15 N N13 A3K . . . B 2 6.482 -1.217 19.325 1 26.73 ? N13 A3K 301 A 1 HETATM 16 C C10 A3K . . . B 2 7.465 -1.786 18.63 1 25.51 ? C10 A3K 301 A 1 HETATM 17 C C12 A3K . . . B 2 6.969 -2.976 18.175 1 23.73 ? C12 A3K 301 A 1 HETATM 18 C C09 A3K . . . B 2 7.806 -3.8 17.299 1 31.27 ? C09 A3K 301 A 1 HETATM 19 N N08 A3K . . . B 2 8.47 -4.491 16.652 1 34.54 ? N08 A3K 301 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 371 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #