data_5OQT # _model_server_result.job_id 9rPsKF9W-Pnd2ZAD1XA-fQ _model_server_result.datetime_utc '2024-10-18 23:36:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oqt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 5OQT # _exptl.entry_id 5OQT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OQT _cell.length_a 76.923 _cell.length_b 83.148 _cell.length_c 119.744 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OQT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 S N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 320 n n C10 C9 OLC doub 321 n n C10 C11 OLC sing 322 n n C9 C8 OLC sing 323 n n C17 C16 OLC sing 324 z n C11 C12 OLC sing 325 n n C8 C7 OLC sing 326 n n C24 C22 OLC sing 327 n n C24 O25 OLC sing 328 n n C16 C15 OLC sing 329 n n C12 C13 OLC sing 330 n n C7 C6 OLC sing 331 n n C15 C14 OLC sing 332 n n C13 C14 OLC sing 333 n n C6 C5 OLC sing 334 n n C5 C4 OLC sing 335 n n C4 C3 OLC sing 336 n n C3 C2 OLC sing 337 n n C2 C1 OLC sing 338 n n C21 C22 OLC sing 339 n n C21 O20 OLC sing 340 n n C1 O19 OLC doub 341 n n C1 O20 OLC sing 342 n n C22 O23 OLC sing 343 n n C18 H18 OLC sing 344 n n C18 H18A OLC sing 345 n n C18 H18B OLC sing 346 n n C10 H10 OLC sing 347 n n C9 H9 OLC sing 348 n n C17 H17 OLC sing 349 n n C17 H17A OLC sing 350 n n C11 H11 OLC sing 351 n n C11 H11A OLC sing 352 n n C8 H8 OLC sing 353 n n C8 H8A OLC sing 354 n n C24 H24 OLC sing 355 n n C24 H24A OLC sing 356 n n C16 H16 OLC sing 357 n n C16 H16A OLC sing 358 n n C12 H12 OLC sing 359 n n C12 H12A OLC sing 360 n n C7 H7 OLC sing 361 n n C7 H7A OLC sing 362 n n C15 H15 OLC sing 363 n n C15 H15A OLC sing 364 n n C13 H13 OLC sing 365 n n C13 H13A OLC sing 366 n n C6 H6 OLC sing 367 n n C6 H6A OLC sing 368 n n C14 H14 OLC sing 369 n n C14 H14A OLC sing 370 n n C5 H5 OLC sing 371 n n C5 H5A OLC sing 372 n n C4 H4 OLC sing 373 n n C4 H4A OLC sing 374 n n C3 H3 OLC sing 375 n n C3 H3A OLC sing 376 n n C2 H2 OLC sing 377 n n C2 H2A OLC sing 378 n n C21 H21 OLC sing 379 n n C21 H21A OLC sing 380 n n C22 H22 OLC sing 381 n n O25 HO25 OLC sing 382 n n O23 HO23 OLC sing 383 n n # _atom_sites.entry_id 5OQT _atom_sites.fract_transf_matrix[1][1] 0.013 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008351 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 OLC A 1 501 2 OLC OLC . D 3 OLC A 1 502 3 OLC OLC . E 3 OLC A 1 503 6 OLC OLC . F 3 OLC A 1 504 7 OLC OLC . G 3 OLC A 1 505 8 OLC OLC . H 3 OLC A 1 506 9 OLC OLC . I 3 OLC A 1 507 10 OLC OLC . J 3 OLC A 1 508 11 OLC OLC . K 3 OLC A 1 509 12 OLC OLC . L 3 OLC A 1 510 13 OLC OLC . M 3 OLC A 1 511 14 OLC OLC . N 3 OLC A 1 512 15 OLC OLC . O 4 ACT A 1 513 1 ACT ACT . P 5 CL A 1 514 3 CL CL . Q 6 ALA A 1 515 2 ALA ALA . R 7 CLR C 1 101 1 CLR CLR . S 3 OLC C 1 102 16 OLC OLC . T 8 HOH A 1 601 33 HOH HOH . T 8 HOH A 2 602 29 HOH HOH . T 8 HOH A 3 603 60 HOH HOH . T 8 HOH A 4 604 21 HOH HOH . T 8 HOH A 5 605 121 HOH HOH . T 8 HOH A 6 606 28 HOH HOH . T 8 HOH A 7 607 110 HOH HOH . T 8 HOH A 8 608 9 HOH HOH . T 8 HOH A 9 609 112 HOH HOH . T 8 HOH A 10 610 87 HOH HOH . T 8 HOH A 11 611 85 HOH HOH . T 8 HOH A 12 612 115 HOH HOH . T 8 HOH A 13 613 61 HOH HOH . T 8 HOH A 14 614 143 HOH HOH . T 8 HOH A 15 615 24 HOH HOH . T 8 HOH A 16 616 52 HOH HOH . T 8 HOH A 17 617 57 HOH HOH . T 8 HOH A 18 618 139 HOH HOH . T 8 HOH A 19 619 11 HOH HOH . T 8 HOH A 20 620 59 HOH HOH . T 8 HOH A 21 621 26 HOH HOH . T 8 HOH A 22 622 138 HOH HOH . T 8 HOH A 23 623 64 HOH HOH . T 8 HOH A 24 624 10 HOH HOH . T 8 HOH A 25 625 113 HOH HOH . T 8 HOH A 26 626 74 HOH HOH . T 8 HOH A 27 627 13 HOH HOH . T 8 HOH A 28 628 38 HOH HOH . T 8 HOH A 29 629 131 HOH HOH . T 8 HOH A 30 630 82 HOH HOH . T 8 HOH A 31 631 30 HOH HOH . T 8 HOH A 32 632 89 HOH HOH . T 8 HOH A 33 633 125 HOH HOH . T 8 HOH A 34 634 63 HOH HOH . T 8 HOH A 35 635 80 HOH HOH . T 8 HOH A 36 636 120 HOH HOH . T 8 HOH A 37 637 111 HOH HOH . T 8 HOH A 38 638 41 HOH HOH . T 8 HOH A 39 639 10 HOH HOH . T 8 HOH A 40 640 93 HOH HOH . T 8 HOH A 41 641 36 HOH HOH . T 8 HOH A 42 642 50 HOH HOH . T 8 HOH A 43 643 104 HOH HOH . T 8 HOH A 44 644 97 HOH HOH . T 8 HOH A 45 645 141 HOH HOH . T 8 HOH A 46 646 73 HOH HOH . T 8 HOH A 47 647 69 HOH HOH . T 8 HOH A 48 648 118 HOH HOH . T 8 HOH A 49 649 119 HOH HOH . T 8 HOH A 50 650 3 HOH HOH . T 8 HOH A 51 651 18 HOH HOH . T 8 HOH A 52 652 76 HOH HOH . T 8 HOH A 53 653 25 HOH HOH . T 8 HOH A 54 654 68 HOH HOH . T 8 HOH A 55 655 48 HOH HOH . T 8 HOH A 56 656 99 HOH HOH . T 8 HOH A 57 657 126 HOH HOH . T 8 HOH A 58 658 55 HOH HOH . T 8 HOH A 59 659 17 HOH HOH . T 8 HOH A 60 660 37 HOH HOH . T 8 HOH A 61 661 12 HOH HOH . T 8 HOH A 62 662 5 HOH HOH . T 8 HOH A 63 663 114 HOH HOH . T 8 HOH A 64 664 92 HOH HOH . T 8 HOH A 65 665 67 HOH HOH . T 8 HOH A 66 666 20 HOH HOH . T 8 HOH A 67 667 54 HOH HOH . T 8 HOH A 68 668 65 HOH HOH . T 8 HOH A 69 669 107 HOH HOH . T 8 HOH A 70 670 134 HOH HOH . T 8 HOH A 71 671 27 HOH HOH . T 8 HOH A 72 672 15 HOH HOH . T 8 HOH A 73 673 7 HOH HOH . T 8 HOH A 74 674 83 HOH HOH . T 8 HOH A 75 675 84 HOH HOH . T 8 HOH A 76 676 130 HOH HOH . T 8 HOH A 77 677 129 HOH HOH . T 8 HOH A 78 678 90 HOH HOH . T 8 HOH A 79 679 21 HOH HOH . T 8 HOH A 80 680 32 HOH HOH . T 8 HOH A 81 681 19 HOH HOH . T 8 HOH A 82 682 1 HOH HOH . T 8 HOH A 83 683 135 HOH HOH . T 8 HOH A 84 684 127 HOH HOH . T 8 HOH A 85 685 140 HOH HOH . T 8 HOH A 86 686 124 HOH HOH . T 8 HOH A 87 687 34 HOH HOH . T 8 HOH A 88 688 101 HOH HOH . T 8 HOH A 89 689 116 HOH HOH . T 8 HOH A 90 690 78 HOH HOH . T 8 HOH A 91 691 86 HOH HOH . T 8 HOH A 92 692 4 HOH HOH . T 8 HOH A 93 693 9 HOH HOH . T 8 HOH A 94 694 19 HOH HOH . T 8 HOH A 95 695 137 HOH HOH . T 8 HOH A 96 696 49 HOH HOH . T 8 HOH A 97 697 56 HOH HOH . T 8 HOH A 98 698 144 HOH HOH . T 8 HOH A 99 699 81 HOH HOH . T 8 HOH A 100 700 16 HOH HOH . T 8 HOH A 101 701 103 HOH HOH . T 8 HOH A 102 702 79 HOH HOH . T 8 HOH A 103 703 108 HOH HOH . T 8 HOH A 104 704 58 HOH HOH . T 8 HOH A 105 705 117 HOH HOH . T 8 HOH A 106 706 100 HOH HOH . U 8 HOH C 1 201 35 HOH HOH . U 8 HOH C 2 202 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . F 3 -28.248 17.243 18.411 1 135.52 ? C18 OLC 504 A 1 HETATM 2 C C10 OLC . . . F 3 -28.95 11.43 21.107 1 130.67 ? C10 OLC 504 A 1 HETATM 3 C C9 OLC . . . F 3 -28.087 10.797 21.903 1 129.32 ? C9 OLC 504 A 1 HETATM 4 C C17 OLC . . . F 3 -29.71 16.811 18.485 1 135.52 ? C17 OLC 504 A 1 HETATM 5 C C11 OLC . . . F 3 -30.399 11.63 21.409 1 131.55 ? C11 OLC 504 A 1 HETATM 6 C C8 OLC . . . F 3 -26.63 10.598 21.601 1 127.54 ? C8 OLC 504 A 1 HETATM 7 C C24 OLC . . . F 3 -18.383 4.516 18.223 1 107.07 ? C24 OLC 504 A 1 HETATM 8 C C16 OLC . . . F 3 -29.977 15.996 19.758 1 135.12 ? C16 OLC 504 A 1 HETATM 9 C C12 OLC . . . F 3 -31.056 12.394 20.248 1 132.43 ? C12 OLC 504 A 1 HETATM 10 C C7 OLC . . . F 3 -26.4 9.186 21.029 1 125.41 ? C7 OLC 504 A 1 HETATM 11 C C15 OLC . . . F 3 -31.466 15.631 19.864 1 134.46 ? C15 OLC 504 A 1 HETATM 12 C C13 OLC . . . F 3 -32.199 13.32 20.733 1 133.15 ? C13 OLC 504 A 1 HETATM 13 C C6 OLC . . . F 3 -26.299 9.2 19.494 1 123.24 ? C6 OLC 504 A 1 HETATM 14 C C14 OLC . . . F 3 -31.718 14.747 21.103 1 133.77 ? C14 OLC 504 A 1 HETATM 15 C C5 OLC . . . F 3 -26.106 7.771 18.955 1 121.04 ? C5 OLC 504 A 1 HETATM 16 C C4 OLC . . . F 3 -24.625 7.417 18.746 1 118.83 ? C4 OLC 504 A 1 HETATM 17 C C3 OLC . . . F 3 -24.527 6.059 18.047 1 116.76 ? C3 OLC 504 A 1 HETATM 18 C C2 OLC . . . F 3 -23.061 5.694 17.756 1 115.3 ? C2 OLC 504 A 1 HETATM 19 C C21 OLC . . . F 3 -20.797 3.812 17.894 1 110.02 ? C21 OLC 504 A 1 HETATM 20 C C1 OLC . . . F 3 -22.953 4.51 16.78 1 114.06 ? C1 OLC 504 A 1 HETATM 21 C C22 OLC . . . F 3 -19.579 4.544 17.228 1 108.25 ? C22 OLC 504 A 1 HETATM 22 O O19 OLC . . . F 3 -23.759 4.209 15.903 1 114.4 ? O19 OLC 504 A 1 HETATM 23 O O25 OLC . . . F 3 -18.806 5.144 19.403 1 106.44 ? O25 OLC 504 A 1 HETATM 24 O O23 OLC . . . F 3 -19.212 3.968 16.024 1 108.06 ? O23 OLC 504 A 1 HETATM 25 O O20 OLC . . . F 3 -21.83 3.68 16.906 1 111.79 ? O20 OLC 504 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #