data_5OQU # _model_server_result.job_id lguGPSkKQYFFiprDnPn8MQ _model_server_result.datetime_utc '2024-11-28 03:25:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oqu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 5OQU # _exptl.entry_id 5OQU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.72 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[3-chloranyl-4-(2-methoxyphenyl)phenyl]methanamine' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OQU _cell.length_a 64.668 _cell.length_b 67.922 _cell.length_c 332.804 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OQU _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASN 184 A ASN 161 1_555 H MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc2 B OD2 ASP 198 A ASP 175 1_555 H MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc3 F O1B ADP . A ADP 401 1_555 H MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc4 F O1A ADP . A ADP 401 1_555 H MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc5 F O2A ADP . A ADP 401 1_555 I MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? # _chem_comp.formula 'C14 H14 Cl N O' _chem_comp.formula_weight 247.72 _chem_comp.id A4B _chem_comp.mon_nstd_flag . _chem_comp.name '[3-chloranyl-4-(2-methoxyphenyl)phenyl]methanamine' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O A4B sing 1 n n O C1 A4B sing 2 n n C2 C1 A4B doub 3 n y C2 C3 A4B sing 4 n y C1 C6 A4B sing 5 n y CL C13 A4B sing 6 n n C3 C4 A4B doub 7 n y C6 C7 A4B sing 8 n n C6 C5 A4B doub 9 n y C13 C7 A4B doub 10 n y C13 C12 A4B sing 11 n y C4 C5 A4B sing 12 n y C7 C8 A4B sing 13 n y C12 C10 A4B doub 14 n y N C11 A4B sing 15 n n C8 C9 A4B doub 16 n y C10 C9 A4B sing 17 n y C10 C11 A4B sing 18 n n C4 H1 A4B sing 19 n n C11 H2 A4B sing 20 n n C11 H3 A4B sing 21 n n C3 H4 A4B sing 22 n n C2 H5 A4B sing 23 n n C12 H6 A4B sing 24 n n N H7 A4B sing 25 n n N H8 A4B sing 26 n n C9 H10 A4B sing 27 n n C8 H11 A4B sing 28 n n C H12 A4B sing 29 n n C H13 A4B sing 30 n n C H14 A4B sing 31 n n C5 H15 A4B sing 32 n n # _atom_sites.entry_id 5OQU _atom_sites.fract_transf_matrix[1][1] 0.015464 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP B 1 401 2 ADP ADP . D 3 ACT B 1 402 4 ACT ACT . E 3 ACT B 1 403 5 ACT ACT . F 2 ADP A 1 401 1 ADP ADP . G 4 A4B A 1 402 1 A4B LC5 . H 5 MG A 1 403 1 MG MG . I 5 MG A 1 404 2 MG MG . J 3 ACT A 1 405 1 ACT ACT . K 3 ACT A 1 406 2 ACT ACT . L 3 ACT A 1 407 3 ACT ACT . M 6 IHP A 1 408 1 IHP I6P . N 7 CL A 1 409 1 CL CL . O 8 HOH B 1 501 13 HOH HOH . O 8 HOH B 2 502 5 HOH HOH . P 8 HOH A 1 501 6 HOH HOH . P 8 HOH A 2 502 9 HOH HOH . P 8 HOH A 3 503 11 HOH HOH . P 8 HOH A 4 504 15 HOH HOH . P 8 HOH A 5 505 14 HOH HOH . P 8 HOH A 6 506 4 HOH HOH . P 8 HOH A 7 507 2 HOH HOH . P 8 HOH A 8 508 7 HOH HOH . P 8 HOH A 9 509 8 HOH HOH . P 8 HOH A 10 510 10 HOH HOH . P 8 HOH A 11 511 3 HOH HOH . P 8 HOH A 12 512 16 HOH HOH . P 8 HOH A 13 513 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 A4B . . . G 4 4.409 143.839 350.882 1 71.05 ? C4 A4B 402 A 1 HETATM 2 C C11 A4B . . . G 4 5.112 136.134 352.825 1 72.17 ? C11 A4B 402 A 1 HETATM 3 C C3 A4B . . . G 4 4.971 144.137 349.663 1 69.58 ? C3 A4B 402 A 1 HETATM 4 C C2 A4B . . . G 4 5.559 143.141 348.905 1 67.35 ? C2 A4B 402 A 1 HETATM 5 C C1 A4B . . . G 4 5.578 141.84 349.383 1 68.29 ? C1 A4B 402 A 1 HETATM 6 C C13 A4B . . . G 4 4.184 139.116 350.683 1 79.93 ? C13 A4B 402 A 1 HETATM 7 CL CL A4B . . . G 4 3.077 139.442 349.389 1 90.94 ? CL A4B 402 A 1 HETATM 8 C C12 A4B . . . G 4 4.211 137.84 351.209 1 75.29 ? C12 A4B 402 A 1 HETATM 9 C C10 A4B . . . G 4 5.079 137.526 352.246 1 71.28 ? C10 A4B 402 A 1 HETATM 10 N N A4B . . . G 4 6.038 135.214 352.173 1 70.84 ? N A4B 402 A 1 HETATM 11 C C9 A4B . . . G 4 5.91 138.521 352.733 1 68.51 ? C9 A4B 402 A 1 HETATM 12 C C8 A4B . . . G 4 5.883 139.799 352.205 1 67.61 ? C8 A4B 402 A 1 HETATM 13 C C7 A4B . . . G 4 5.016 140.124 351.165 1 72.96 ? C7 A4B 402 A 1 HETATM 14 C C6 A4B . . . G 4 5.012 141.515 350.619 1 71.77 ? C6 A4B 402 A 1 HETATM 15 O O A4B . . . G 4 6.139 140.8 348.696 1 65.33 ? O A4B 402 A 1 HETATM 16 C C A4B . . . G 4 6.67 141.077 347.403 1 62.38 ? C A4B 402 A 1 HETATM 17 C C5 A4B . . . G 4 4.427 142.541 351.36 1 69.74 ? C5 A4B 402 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 17 #