data_5ORB
#
_model_server_result.job_id            8ECR4TKcUNXQPRwW-sLE2A 
_model_server_result.datetime_utc      '2024-11-02 18:22:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5orb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":2001}' 
#
_entry.id    5ORB 
#
_exptl.entry_id    5ORB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              317.406 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(4-methoxyphenyl)sulfanyl-~{N}-(2-methyl-5,6-dihydro-4~{H}-cyclopenta[c]pyrazol-3-yl)ethanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5ORB 
_cell.length_a            80.906 
_cell.length_b            96.788 
_cell.length_c            57.82 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ORB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C16 H19 N3 O2 S' 
_chem_comp.formula_weight    317.406 
_chem_comp.id                JR6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(4-methoxyphenyl)sulfanyl-~{N}-(2-methyl-5,6-dihydro-4~{H}-cyclopenta[c]pyrazol-3-yl)ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O10 C09 JR6 doub 182 n n 
C08 C09 JR6 sing 183 n n 
C08 S07 JR6 sing 184 n n 
C09 N11 JR6 sing 185 n n 
C21 C22 JR6 doub 186 n y 
C21 C06 JR6 sing 187 n y 
C22 C03 JR6 sing 188 n y 
S07 C06 JR6 sing 189 n n 
N11 C12 JR6 sing 190 n n 
C06 C05 JR6 doub 191 n y 
C01 O02 JR6 sing 192 n n 
C12 C13 JR6 doub 193 n y 
C12 N19 JR6 sing 194 n y 
C20 N19 JR6 sing 195 n n 
C14 C13 JR6 sing 196 n n 
C14 C15 JR6 sing 197 n n 
C13 C17 JR6 sing 198 n y 
N19 N18 JR6 sing 199 n y 
C03 O02 JR6 sing 200 n n 
C03 C04 JR6 doub 201 n y 
C17 N18 JR6 doub 202 n y 
C17 C16 JR6 sing 203 n n 
C16 C15 JR6 sing 204 n n 
C05 C04 JR6 sing 205 n y 
C01 H1 JR6 sing 206 n n 
C01 H2 JR6 sing 207 n n 
C01 H3 JR6 sing 208 n n 
C04 H4 JR6 sing 209 n n 
C05 H5 JR6 sing 210 n n 
C08 H6 JR6 sing 211 n n 
C08 H7 JR6 sing 212 n n 
C14 H8 JR6 sing 213 n n 
C14 H9 JR6 sing 214 n n 
C15 H10 JR6 sing 215 n n 
C15 H11 JR6 sing 216 n n 
C16 H12 JR6 sing 217 n n 
C16 H13 JR6 sing 218 n n 
C20 H14 JR6 sing 219 n n 
C20 H15 JR6 sing 220 n n 
C20 H16 JR6 sing 221 n n 
C21 H17 JR6 sing 222 n n 
C22 H18 JR6 sing 223 n n 
N11 H19 JR6 sing 224 n n 
#
_atom_sites.entry_id                     5ORB 
_atom_sites.fract_transf_matrix[1][1]    0.01236 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010332 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017295 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 JR6 A 1 2001 1 JR6 JR6 . 
C 3 EDO A 1 2002 1 EDO EDO . 
D 4 HOH A 1 2101 12 HOH HOH . 
D 4 HOH A 2 2102 6 HOH HOH . 
D 4 HOH A 3 2103 24 HOH HOH . 
D 4 HOH A 4 2104 68 HOH HOH . 
D 4 HOH A 5 2105 51 HOH HOH . 
D 4 HOH A 6 2106 7 HOH HOH . 
D 4 HOH A 7 2107 16 HOH HOH . 
D 4 HOH A 8 2108 13 HOH HOH . 
D 4 HOH A 9 2109 85 HOH HOH . 
D 4 HOH A 10 2110 20 HOH HOH . 
D 4 HOH A 11 2111 10 HOH HOH . 
D 4 HOH A 12 2112 19 HOH HOH . 
D 4 HOH A 13 2113 98 HOH HOH . 
D 4 HOH A 14 2114 66 HOH HOH . 
D 4 HOH A 15 2115 3 HOH HOH . 
D 4 HOH A 16 2116 2 HOH HOH . 
D 4 HOH A 17 2117 45 HOH HOH . 
D 4 HOH A 18 2118 11 HOH HOH . 
D 4 HOH A 19 2119 31 HOH HOH . 
D 4 HOH A 20 2120 28 HOH HOH . 
D 4 HOH A 21 2121 30 HOH HOH . 
D 4 HOH A 22 2122 79 HOH HOH . 
D 4 HOH A 23 2123 62 HOH HOH . 
D 4 HOH A 24 2124 56 HOH HOH . 
D 4 HOH A 25 2125 53 HOH HOH . 
D 4 HOH A 26 2126 84 HOH HOH . 
D 4 HOH A 27 2127 80 HOH HOH . 
D 4 HOH A 28 2128 34 HOH HOH . 
D 4 HOH A 29 2129 82 HOH HOH . 
D 4 HOH A 30 2130 5 HOH HOH . 
D 4 HOH A 31 2131 26 HOH HOH . 
D 4 HOH A 32 2132 40 HOH HOH . 
D 4 HOH A 33 2133 33 HOH HOH . 
D 4 HOH A 34 2134 8 HOH HOH . 
D 4 HOH A 35 2135 9 HOH HOH . 
D 4 HOH A 36 2136 49 HOH HOH . 
D 4 HOH A 37 2137 39 HOH HOH . 
D 4 HOH A 38 2138 99 HOH HOH . 
D 4 HOH A 39 2139 14 HOH HOH . 
D 4 HOH A 40 2140 15 HOH HOH . 
D 4 HOH A 41 2141 60 HOH HOH . 
D 4 HOH A 42 2142 41 HOH HOH . 
D 4 HOH A 43 2143 38 HOH HOH . 
D 4 HOH A 44 2144 1 HOH HOH . 
D 4 HOH A 45 2145 17 HOH HOH . 
D 4 HOH A 46 2146 73 HOH HOH . 
D 4 HOH A 47 2147 90 HOH HOH . 
D 4 HOH A 48 2148 57 HOH HOH . 
D 4 HOH A 49 2149 4 HOH HOH . 
D 4 HOH A 50 2150 59 HOH HOH . 
D 4 HOH A 51 2151 36 HOH HOH . 
D 4 HOH A 52 2152 89 HOH HOH . 
D 4 HOH A 53 2153 32 HOH HOH . 
D 4 HOH A 54 2154 21 HOH HOH . 
D 4 HOH A 55 2155 37 HOH HOH . 
D 4 HOH A 56 2156 61 HOH HOH . 
D 4 HOH A 57 2157 97 HOH HOH . 
D 4 HOH A 58 2158 46 HOH HOH . 
D 4 HOH A 59 2159 52 HOH HOH . 
D 4 HOH A 60 2160 43 HOH HOH . 
D 4 HOH A 61 2161 50 HOH HOH . 
D 4 HOH A 62 2162 44 HOH HOH . 
D 4 HOH A 63 2163 65 HOH HOH . 
D 4 HOH A 64 2164 83 HOH HOH . 
D 4 HOH A 65 2165 71 HOH HOH . 
D 4 HOH A 66 2166 23 HOH HOH . 
D 4 HOH A 67 2167 67 HOH HOH . 
D 4 HOH A 68 2168 25 HOH HOH . 
D 4 HOH A 69 2169 87 HOH HOH . 
D 4 HOH A 70 2170 76 HOH HOH . 
D 4 HOH A 71 2171 64 HOH HOH . 
D 4 HOH A 72 2172 63 HOH HOH . 
D 4 HOH A 73 2173 42 HOH HOH . 
D 4 HOH A 74 2174 35 HOH HOH . 
D 4 HOH A 75 2175 100 HOH HOH . 
D 4 HOH A 76 2176 29 HOH HOH . 
D 4 HOH A 77 2177 96 HOH HOH . 
D 4 HOH A 78 2178 91 HOH HOH . 
D 4 HOH A 79 2179 88 HOH HOH . 
D 4 HOH A 80 2180 75 HOH HOH . 
D 4 HOH A 81 2181 95 HOH HOH . 
D 4 HOH A 82 2182 93 HOH HOH . 
D 4 HOH A 83 2183 81 HOH HOH . 
D 4 HOH A 84 2184 72 HOH HOH . 
D 4 HOH A 85 2185 94 HOH HOH . 
D 4 HOH A 86 2186 70 HOH HOH . 
D 4 HOH A 87 2187 22 HOH HOH . 
D 4 HOH A 88 2188 18 HOH HOH . 
D 4 HOH A 89 2189 55 HOH HOH . 
D 4 HOH A 90 2190 74 HOH HOH . 
D 4 HOH A 91 2191 48 HOH HOH . 
D 4 HOH A 92 2192 69 HOH HOH . 
D 4 HOH A 93 2193 92 HOH HOH . 
D 4 HOH A 94 2194 54 HOH HOH . 
D 4 HOH A 95 2195 86 HOH HOH . 
D 4 HOH A 96 2196 58 HOH HOH . 
D 4 HOH A 97 2197 78 HOH HOH . 
D 4 HOH A 98 2198 27 HOH HOH . 
D 4 HOH A 99 2199 47 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 JR6 . . . B 2 -35.305 -7.26 0.303 1 92.77 ? C01 JR6 2001 A 1 
HETATM 2 C C03 JR6 . . . B 2 -33.309 -8.389 0.879 1 88.68 ? C03 JR6 2001 A 1 
HETATM 3 C C04 JR6 . . . B 2 -32.456 -8.868 1.866 1 83.79 ? C04 JR6 2001 A 1 
HETATM 4 C C05 JR6 . . . B 2 -31.567 -9.889 1.577 1 80.94 ? C05 JR6 2001 A 1 
HETATM 5 C C06 JR6 . . . B 2 -31.531 -10.435 0.301 1 81.15 ? C06 JR6 2001 A 1 
HETATM 6 C C08 JR6 . . . B 2 -29.352 -11.341 -1.526 1 67.62 ? C08 JR6 2001 A 1 
HETATM 7 C C09 JR6 . . . B 2 -28.332 -10.292 -1.093 1 58.39 ? C09 JR6 2001 A 1 
HETATM 8 C C12 JR6 . . . B 2 -26.445 -9.574 0.459 1 42.58 ? C12 JR6 2001 A 1 
HETATM 9 C C13 JR6 . . . B 2 -26.697 -8.226 0.695 1 35.47 ? C13 JR6 2001 A 1 
HETATM 10 C C14 JR6 . . . B 2 -27.803 -7.162 0.669 1 26.56 ? C14 JR6 2001 A 1 
HETATM 11 C C15 JR6 . . . B 2 -27.259 -5.965 1.408 1 32.66 ? C15 JR6 2001 A 1 
HETATM 12 C C16 JR6 . . . B 2 -25.746 -6.139 1.378 1 32.27 ? C16 JR6 2001 A 1 
HETATM 13 C C17 JR6 . . . B 2 -25.497 -7.643 1.102 1 38.62 ? C17 JR6 2001 A 1 
HETATM 14 C C20 JR6 . . . B 2 -24.48 -11.061 0.596 1 38.46 ? C20 JR6 2001 A 1 
HETATM 15 C C21 JR6 . . . B 2 -32.381 -9.959 -0.683 1 80.99 ? C21 JR6 2001 A 1 
HETATM 16 C C22 JR6 . . . B 2 -33.268 -8.936 -0.394 1 85.05 ? C22 JR6 2001 A 1 
HETATM 17 N N11 JR6 . . . B 2 -27.425 -10.562 0.015 1 52.48 ? N11 JR6 2001 A 1 
HETATM 18 N N18 JR6 . . . B 2 -24.549 -8.614 1.118 1 39.74 ? N18 JR6 2001 A 1 
HETATM 19 N N19 JR6 . . . B 2 -25.16 -9.781 0.714 1 36.75 ? N19 JR6 2001 A 1 
HETATM 20 O O02 JR6 . . . B 2 -34.206 -7.355 1.17 1 93.3 ? O02 JR6 2001 A 1 
HETATM 21 O O10 JR6 . . . B 2 -28.291 -9.26 -1.664 1 55.84 ? O10 JR6 2001 A 1 
HETATM 22 S S07 JR6 . . . B 2 -30.366 -11.775 -0.083 1 79.47 ? S07 JR6 2001 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           22 
#