data_5ORK
#
_model_server_result.job_id            lzLybd01Vli-YkET4mmKLA 
_model_server_result.datetime_utc      '2024-11-28 11:13:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ork 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":406}' 
#
_entry.id    5ORK 
#
_exptl.entry_id    5ORK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5ORK 
_cell.length_a            64.98 
_cell.length_b            68.738 
_cell.length_c            332.075 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ORK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OD1 ASN 184 A ASN 161 1_555 E MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? 
metalc ? metalc2 B OD2 ASP 198 A ASP 175 1_555 E MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc3 D O1B ADP . A ADP 401 1_555 E MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? 
metalc ? metalc4 D O1A ADP . A ADP 401 1_555 E MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc5 D O2A ADP . A ADP 401 1_555 F MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc6 E MG MG . A MG 402 1_555 K O HOH . A HOH 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 332 n n 
P O2 PO4 sing 333 n n 
P O3 PO4 sing 334 n n 
P O4 PO4 sing 335 n n 
#
_atom_sites.entry_id                     5ORK 
_atom_sites.fract_transf_matrix[1][1]    0.015389 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014548 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003011 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ADP B 1 401 2 ADP ADP . 
D 2 ADP A 1 401 1 ADP ADP . 
E 3 MG A 1 402 1 MG MG . 
F 3 MG A 1 403 2 MG MG . 
G 4 A4T A 1 404 1 A4T 008 . 
H 5 CL A 1 405 1 CL CL . 
I 6 PO4 A 1 406 1 PO4 PO4 . 
J 7 HOH B 1 501 168 HOH HOH . 
J 7 HOH B 2 502 166 HOH HOH . 
J 7 HOH B 3 503 115 HOH HOH . 
J 7 HOH B 4 504 117 HOH HOH . 
J 7 HOH B 5 505 143 HOH HOH . 
J 7 HOH B 6 506 27 HOH HOH . 
J 7 HOH B 7 507 140 HOH HOH . 
J 7 HOH B 8 508 47 HOH HOH . 
J 7 HOH B 9 509 40 HOH HOH . 
J 7 HOH B 10 510 138 HOH HOH . 
J 7 HOH B 11 511 61 HOH HOH . 
J 7 HOH B 12 512 161 HOH HOH . 
J 7 HOH B 13 513 156 HOH HOH . 
J 7 HOH B 14 514 71 HOH HOH . 
J 7 HOH B 15 515 52 HOH HOH . 
J 7 HOH B 16 516 87 HOH HOH . 
J 7 HOH B 17 517 99 HOH HOH . 
J 7 HOH B 18 518 141 HOH HOH . 
J 7 HOH B 19 519 17 HOH HOH . 
J 7 HOH B 20 520 162 HOH HOH . 
J 7 HOH B 21 521 79 HOH HOH . 
J 7 HOH B 22 522 109 HOH HOH . 
J 7 HOH B 23 523 14 HOH HOH . 
J 7 HOH B 24 524 34 HOH HOH . 
J 7 HOH B 25 525 64 HOH HOH . 
J 7 HOH B 26 526 149 HOH HOH . 
J 7 HOH B 27 527 16 HOH HOH . 
J 7 HOH B 28 528 37 HOH HOH . 
J 7 HOH B 29 529 43 HOH HOH . 
J 7 HOH B 30 530 120 HOH HOH . 
J 7 HOH B 31 531 46 HOH HOH . 
J 7 HOH B 32 532 129 HOH HOH . 
J 7 HOH B 33 533 150 HOH HOH . 
J 7 HOH B 34 534 68 HOH HOH . 
J 7 HOH B 35 535 134 HOH HOH . 
J 7 HOH B 36 536 63 HOH HOH . 
J 7 HOH B 37 537 121 HOH HOH . 
J 7 HOH B 38 538 55 HOH HOH . 
J 7 HOH B 39 539 96 HOH HOH . 
J 7 HOH B 40 540 142 HOH HOH . 
J 7 HOH B 41 541 74 HOH HOH . 
J 7 HOH B 42 542 107 HOH HOH . 
J 7 HOH B 43 543 135 HOH HOH . 
J 7 HOH B 44 544 97 HOH HOH . 
J 7 HOH B 45 545 154 HOH HOH . 
J 7 HOH B 46 546 72 HOH HOH . 
J 7 HOH B 47 547 130 HOH HOH . 
J 7 HOH B 48 548 133 HOH HOH . 
J 7 HOH B 49 549 164 HOH HOH . 
K 7 HOH A 1 501 139 HOH HOH . 
K 7 HOH A 2 502 118 HOH HOH . 
K 7 HOH A 3 503 114 HOH HOH . 
K 7 HOH A 4 504 5 HOH HOH . 
K 7 HOH A 5 505 41 HOH HOH . 
K 7 HOH A 6 506 13 HOH HOH . 
K 7 HOH A 7 507 53 HOH HOH . 
K 7 HOH A 8 508 28 HOH HOH . 
K 7 HOH A 9 509 146 HOH HOH . 
K 7 HOH A 10 510 23 HOH HOH . 
K 7 HOH A 11 511 148 HOH HOH . 
K 7 HOH A 12 512 21 HOH HOH . 
K 7 HOH A 13 513 12 HOH HOH . 
K 7 HOH A 14 514 159 HOH HOH . 
K 7 HOH A 15 515 22 HOH HOH . 
K 7 HOH A 16 516 59 HOH HOH . 
K 7 HOH A 17 517 50 HOH HOH . 
K 7 HOH A 18 518 29 HOH HOH . 
K 7 HOH A 19 519 19 HOH HOH . 
K 7 HOH A 20 520 30 HOH HOH . 
K 7 HOH A 21 521 167 HOH HOH . 
K 7 HOH A 22 522 26 HOH HOH . 
K 7 HOH A 23 523 82 HOH HOH . 
K 7 HOH A 24 524 78 HOH HOH . 
K 7 HOH A 25 525 136 HOH HOH . 
K 7 HOH A 26 526 1 HOH HOH . 
K 7 HOH A 27 527 70 HOH HOH . 
K 7 HOH A 28 528 51 HOH HOH . 
K 7 HOH A 29 529 119 HOH HOH . 
K 7 HOH A 30 530 83 HOH HOH . 
K 7 HOH A 31 531 101 HOH HOH . 
K 7 HOH A 32 532 2 HOH HOH . 
K 7 HOH A 33 533 25 HOH HOH . 
K 7 HOH A 34 534 9 HOH HOH . 
K 7 HOH A 35 535 7 HOH HOH . 
K 7 HOH A 36 536 15 HOH HOH . 
K 7 HOH A 37 537 62 HOH HOH . 
K 7 HOH A 38 538 116 HOH HOH . 
K 7 HOH A 39 539 24 HOH HOH . 
K 7 HOH A 40 540 128 HOH HOH . 
K 7 HOH A 41 541 32 HOH HOH . 
K 7 HOH A 42 542 48 HOH HOH . 
K 7 HOH A 43 543 65 HOH HOH . 
K 7 HOH A 44 544 81 HOH HOH . 
K 7 HOH A 45 545 20 HOH HOH . 
K 7 HOH A 46 546 92 HOH HOH . 
K 7 HOH A 47 547 49 HOH HOH . 
K 7 HOH A 48 548 127 HOH HOH . 
K 7 HOH A 49 549 151 HOH HOH . 
K 7 HOH A 50 550 98 HOH HOH . 
K 7 HOH A 51 551 4 HOH HOH . 
K 7 HOH A 52 552 131 HOH HOH . 
K 7 HOH A 53 553 93 HOH HOH . 
K 7 HOH A 54 554 105 HOH HOH . 
K 7 HOH A 55 555 126 HOH HOH . 
K 7 HOH A 56 556 86 HOH HOH . 
K 7 HOH A 57 557 163 HOH HOH . 
K 7 HOH A 58 558 160 HOH HOH . 
K 7 HOH A 59 559 111 HOH HOH . 
K 7 HOH A 60 560 80 HOH HOH . 
K 7 HOH A 61 561 42 HOH HOH . 
K 7 HOH A 62 562 100 HOH HOH . 
K 7 HOH A 63 563 39 HOH HOH . 
K 7 HOH A 64 564 60 HOH HOH . 
K 7 HOH A 65 565 122 HOH HOH . 
K 7 HOH A 66 566 67 HOH HOH . 
K 7 HOH A 67 567 106 HOH HOH . 
K 7 HOH A 68 568 103 HOH HOH . 
K 7 HOH A 69 569 145 HOH HOH . 
K 7 HOH A 70 570 75 HOH HOH . 
K 7 HOH A 71 571 88 HOH HOH . 
K 7 HOH A 72 572 36 HOH HOH . 
K 7 HOH A 73 573 31 HOH HOH . 
K 7 HOH A 74 574 132 HOH HOH . 
K 7 HOH A 75 575 102 HOH HOH . 
K 7 HOH A 76 576 76 HOH HOH . 
K 7 HOH A 77 577 110 HOH HOH . 
K 7 HOH A 78 578 18 HOH HOH . 
K 7 HOH A 79 579 91 HOH HOH . 
K 7 HOH A 80 580 77 HOH HOH . 
K 7 HOH A 81 581 33 HOH HOH . 
K 7 HOH A 82 582 112 HOH HOH . 
K 7 HOH A 83 583 108 HOH HOH . 
K 7 HOH A 84 584 157 HOH HOH . 
K 7 HOH A 85 585 125 HOH HOH . 
K 7 HOH A 86 586 35 HOH HOH . 
K 7 HOH A 87 587 155 HOH HOH . 
K 7 HOH A 88 588 153 HOH HOH . 
K 7 HOH A 89 589 104 HOH HOH . 
K 7 HOH A 90 590 123 HOH HOH . 
K 7 HOH A 91 591 90 HOH HOH . 
K 7 HOH A 92 592 137 HOH HOH . 
K 7 HOH A 93 593 57 HOH HOH . 
K 7 HOH A 94 594 84 HOH HOH . 
K 7 HOH A 95 595 124 HOH HOH . 
K 7 HOH A 96 596 69 HOH HOH . 
K 7 HOH A 97 597 165 HOH HOH . 
K 7 HOH A 98 598 158 HOH HOH . 
K 7 HOH A 99 599 89 HOH HOH . 
K 7 HOH A 100 600 113 HOH HOH . 
K 7 HOH A 101 601 147 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . I 6 82.976 152.174 325.467 1 76.88 ? P PO4 406 A 1 
HETATM 2 O O1 PO4 . . . I 6 83.993 151.371 324.527 1 81.3 ? O1 PO4 406 A 1 
HETATM 3 O O2 PO4 . . . I 6 81.503 152.112 324.841 1 82.66 ? O2 PO4 406 A 1 
HETATM 4 O O3 PO4 . . . I 6 83.378 153.671 325.577 1 72.16 ? O3 PO4 406 A 1 
HETATM 5 O O4 PO4 . . . I 6 82.961 151.449 326.894 1 74.97 ? O4 PO4 406 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#