data_5ORV
#
_model_server_result.job_id            640b2smq8CDiebyJEEPfSQ 
_model_server_result.datetime_utc      '2024-11-04 22:17:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5orv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":406}' 
#
_entry.id    5ORV 
#
_exptl.entry_id    5ORV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              207.337 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[3,5-bis(methylsulfanyl)-1,2-thiazol-4-yl]methanol' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5ORV 
_cell.length_a            81.66 
_cell.length_b            81.66 
_cell.length_c            175.15 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ORV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C THR 161 A THR 287 1_555 A N TPO 162 A TPO 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C TPO 162 A TPO 288 1_555 A N LEU 163 A LEU 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
metalc ? metalc1 A OD1 ASN 135 A ASN 261 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? 
metalc ? metalc2 A OD2 ASP 148 A ASP 274 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc3 A OD1 ASP 148 A ASP 274 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc4 B O3B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc5 B O2A ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc6 B O1B ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc7 C MG MG . A MG 402 1_555 H O HOH . A HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc8 C MG MG . A MG 402 1_555 H O HOH . A HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc9 D MG MG . A MG 403 1_555 H O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc10 D MG MG . A MG 403 1_555 H O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc11 D MG MG . A MG 403 1_555 H O HOH . A HOH 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc12 D MG MG . A MG 403 1_555 H O HOH . A HOH 588 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
#
_chem_comp.formula           'C6 H9 N O S3' 
_chem_comp.formula_weight    207.337 
_chem_comp.id                A65 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[3,5-bis(methylsulfanyl)-1,2-thiazol-4-yl]methanol' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C5 A65 sing 1 n n 
C4 C2 A65 doub 2 n y 
C4 C1 A65 sing 3 n y 
C5 O A65 sing 4 n n 
C3 S2 A65 sing 5 n n 
C2 S2 A65 sing 6 n n 
C2 S1 A65 sing 7 n y 
C1 N A65 doub 8 n y 
C1 S A65 sing 9 n n 
S1 N A65 sing 10 n y 
S C A65 sing 11 n n 
C5 H1 A65 sing 12 n n 
C5 H2 A65 sing 13 n n 
C3 H3 A65 sing 14 n n 
C3 H4 A65 sing 15 n n 
C3 H5 A65 sing 16 n n 
O H6 A65 sing 17 n n 
C H8 A65 sing 18 n n 
C H9 A65 sing 19 n n 
C H10 A65 sing 20 n n 
#
_atom_sites.entry_id                     5ORV 
_atom_sites.fract_transf_matrix[1][1]    0.012246 
_atom_sites.fract_transf_matrix[1][2]    0.00707 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01414 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005709 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ADP A 1 401 1392 ADP ADP . 
C 3 MG A 1 402 1395 MG MG . 
D 3 MG A 1 403 1396 MG MG . 
E 4 CL A 1 404 1397 CL CL . 
F 4 CL A 1 405 1398 CL CL . 
G 5 A65 A 1 406 1 A65 FRG . 
H 6 HOH A 1 501 6 HOH HOH . 
H 6 HOH A 2 502 57 HOH HOH . 
H 6 HOH A 3 503 63 HOH HOH . 
H 6 HOH A 4 504 93 HOH HOH . 
H 6 HOH A 5 505 80 HOH HOH . 
H 6 HOH A 6 506 71 HOH HOH . 
H 6 HOH A 7 507 62 HOH HOH . 
H 6 HOH A 8 508 7 HOH HOH . 
H 6 HOH A 9 509 76 HOH HOH . 
H 6 HOH A 10 510 30 HOH HOH . 
H 6 HOH A 11 511 2 HOH HOH . 
H 6 HOH A 12 512 12 HOH HOH . 
H 6 HOH A 13 513 103 HOH HOH . 
H 6 HOH A 14 514 36 HOH HOH . 
H 6 HOH A 15 515 64 HOH HOH . 
H 6 HOH A 16 516 55 HOH HOH . 
H 6 HOH A 17 517 52 HOH HOH . 
H 6 HOH A 18 518 39 HOH HOH . 
H 6 HOH A 19 519 9 HOH HOH . 
H 6 HOH A 20 520 14 HOH HOH . 
H 6 HOH A 21 521 17 HOH HOH . 
H 6 HOH A 22 522 29 HOH HOH . 
H 6 HOH A 23 523 18 HOH HOH . 
H 6 HOH A 24 524 40 HOH HOH . 
H 6 HOH A 25 525 56 HOH HOH . 
H 6 HOH A 26 526 5 HOH HOH . 
H 6 HOH A 27 527 77 HOH HOH . 
H 6 HOH A 28 528 37 HOH HOH . 
H 6 HOH A 29 529 22 HOH HOH . 
H 6 HOH A 30 530 15 HOH HOH . 
H 6 HOH A 31 531 16 HOH HOH . 
H 6 HOH A 32 532 50 HOH HOH . 
H 6 HOH A 33 533 43 HOH HOH . 
H 6 HOH A 34 534 27 HOH HOH . 
H 6 HOH A 35 535 1 HOH HOH . 
H 6 HOH A 36 536 42 HOH HOH . 
H 6 HOH A 37 537 21 HOH HOH . 
H 6 HOH A 38 538 106 HOH HOH . 
H 6 HOH A 39 539 23 HOH HOH . 
H 6 HOH A 40 540 82 HOH HOH . 
H 6 HOH A 41 541 73 HOH HOH . 
H 6 HOH A 42 542 85 HOH HOH . 
H 6 HOH A 43 543 78 HOH HOH . 
H 6 HOH A 44 544 26 HOH HOH . 
H 6 HOH A 45 545 38 HOH HOH . 
H 6 HOH A 46 546 104 HOH HOH . 
H 6 HOH A 47 547 41 HOH HOH . 
H 6 HOH A 48 548 68 HOH HOH . 
H 6 HOH A 49 549 25 HOH HOH . 
H 6 HOH A 50 550 20 HOH HOH . 
H 6 HOH A 51 551 46 HOH HOH . 
H 6 HOH A 52 552 3 HOH HOH . 
H 6 HOH A 53 553 89 HOH HOH . 
H 6 HOH A 54 554 45 HOH HOH . 
H 6 HOH A 55 555 28 HOH HOH . 
H 6 HOH A 56 556 58 HOH HOH . 
H 6 HOH A 57 557 13 HOH HOH . 
H 6 HOH A 58 558 11 HOH HOH . 
H 6 HOH A 59 559 33 HOH HOH . 
H 6 HOH A 60 560 4 HOH HOH . 
H 6 HOH A 61 561 35 HOH HOH . 
H 6 HOH A 62 562 32 HOH HOH . 
H 6 HOH A 63 563 10 HOH HOH . 
H 6 HOH A 64 564 69 HOH HOH . 
H 6 HOH A 65 565 90 HOH HOH . 
H 6 HOH A 66 566 86 HOH HOH . 
H 6 HOH A 67 567 79 HOH HOH . 
H 6 HOH A 68 568 31 HOH HOH . 
H 6 HOH A 69 569 34 HOH HOH . 
H 6 HOH A 70 570 44 HOH HOH . 
H 6 HOH A 71 571 75 HOH HOH . 
H 6 HOH A 72 572 24 HOH HOH . 
H 6 HOH A 73 573 72 HOH HOH . 
H 6 HOH A 74 574 48 HOH HOH . 
H 6 HOH A 75 575 8 HOH HOH . 
H 6 HOH A 76 576 100 HOH HOH . 
H 6 HOH A 77 577 19 HOH HOH . 
H 6 HOH A 78 578 95 HOH HOH . 
H 6 HOH A 79 579 51 HOH HOH . 
H 6 HOH A 80 580 53 HOH HOH . 
H 6 HOH A 81 581 111 HOH HOH . 
H 6 HOH A 82 582 74 HOH HOH . 
H 6 HOH A 83 583 70 HOH HOH . 
H 6 HOH A 84 584 112 HOH HOH . 
H 6 HOH A 85 585 98 HOH HOH . 
H 6 HOH A 86 586 61 HOH HOH . 
H 6 HOH A 87 587 97 HOH HOH . 
H 6 HOH A 88 588 96 HOH HOH . 
H 6 HOH A 89 589 83 HOH HOH . 
H 6 HOH A 90 590 99 HOH HOH . 
H 6 HOH A 91 591 59 HOH HOH . 
H 6 HOH A 92 592 114 HOH HOH . 
H 6 HOH A 93 593 113 HOH HOH . 
H 6 HOH A 94 594 49 HOH HOH . 
H 6 HOH A 95 595 47 HOH HOH . 
H 6 HOH A 96 596 81 HOH HOH . 
H 6 HOH A 97 597 115 HOH HOH . 
H 6 HOH A 98 598 94 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 A65 . . . G 5 -10.855 13.289 -17.219 1 75.11 ? C4 A65 406 A 1 
HETATM 2 C C5 A65 . . . G 5 -9.626 12.721 -17.818 1 74.83 ? C5 A65 406 A 1 
HETATM 3 C C3 A65 . . . G 5 -10.209 10.717 -15.329 1 68.61 ? C3 A65 406 A 1 
HETATM 4 C C2 A65 . . . G 5 -11.789 12.903 -16.159 1 81.25 ? C2 A65 406 A 1 
HETATM 5 C C1 A65 . . . G 5 -11.482 14.572 -17.666 1 82.23 ? C1 A65 406 A 1 
HETATM 6 O O A65 . . . G 5 -9.938 11.94 -18.974 1 77.01 ? O A65 406 A 1 
HETATM 7 S S2 A65 . . . G 5 -11.792 11.492 -15.099 1 75.12 ? S2 A65 406 A 1 
HETATM 8 S S1 A65 . . . G 5 -12.861 13.848 -15.974 1 84.36 ? S1 A65 406 A 1 
HETATM 9 N N A65 . . . G 5 -12.624 14.886 -16.949 1 88.42 ? N A65 406 A 1 
HETATM 10 S S A65 . . . G 5 -10.781 15.488 -18.936 1 76.85 ? S A65 406 A 1 
HETATM 11 C C A65 . . . G 5 -11.912 16.872 -19.031 1 63.82 ? C A65 406 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           11 
#