data_5ORX # _model_server_result.job_id xdaldovTGcGxDurera-IPg _model_server_result.datetime_utc '2025-04-27 05:49:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5orx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 5ORX # _exptl.entry_id 5ORX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 255.1 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[2,6-bis(chloranyl)phenoxy]pyridin-3-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ORX _cell.length_a 82.4 _cell.length_b 82.4 _cell.length_c 174.81 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ORX _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 161 A THR 287 1_555 A N TPO 162 A TPO 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C TPO 162 A TPO 288 1_555 A N LEU 163 A LEU 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc1 A OD1 ASN 135 A ASN 261 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc2 A OD2 ASP 148 A ASP 274 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc3 A OD1 ASP 148 A ASP 274 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc4 B O3B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc5 B O2A ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc6 B O1B ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc7 C MG MG . A MG 402 1_555 F O HOH . A HOH 572 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc8 C MG MG . A MG 402 1_555 F O HOH . A HOH 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc9 D MG MG . A MG 403 1_555 F O HOH . A HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc10 D MG MG . A MG 403 1_555 F O HOH . A HOH 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc11 D MG MG . A MG 403 1_555 F O HOH . A HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C11 H8 Cl2 N2 O' _chem_comp.formula_weight 255.1 _chem_comp.id A6H _chem_comp.mon_nstd_flag . _chem_comp.name 6-[2,6-bis(chloranyl)phenoxy]pyridin-3-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C A6H sing 1 n n C C10 A6H doub 2 n y C C1 A6H sing 3 n y C10 N1 A6H sing 4 n y C1 C2 A6H doub 5 n y N1 C3 A6H doub 6 n y C2 C3 A6H sing 7 n y C3 O A6H sing 8 n n CL C5 A6H sing 9 n n C5 C6 A6H doub 10 n y C5 C4 A6H sing 11 n y O C4 A6H sing 12 n n C6 C7 A6H sing 13 n y C4 C9 A6H doub 14 n y C7 C8 A6H doub 15 n y C9 C8 A6H sing 16 n y C9 CL1 A6H sing 17 n n C10 H1 A6H sing 18 n n C8 H2 A6H sing 19 n n C7 H3 A6H sing 20 n n C6 H4 A6H sing 21 n n C2 H5 A6H sing 22 n n C1 H6 A6H sing 23 n n N H7 A6H sing 24 n n N H8 A6H sing 25 n n # _atom_sites.entry_id 5ORX _atom_sites.fract_transf_matrix[1][1] 0.012136 _atom_sites.fract_transf_matrix[1][2] 0.007007 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014013 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00572 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 1392 ADP ADP . C 3 MG A 1 402 1395 MG MG . D 3 MG A 1 403 1396 MG MG . E 4 A6H A 1 404 1 A6H FRG . F 5 HOH A 1 501 107 HOH HOH . F 5 HOH A 2 502 45 HOH HOH . F 5 HOH A 3 503 97 HOH HOH . F 5 HOH A 4 504 116 HOH HOH . F 5 HOH A 5 505 72 HOH HOH . F 5 HOH A 6 506 54 HOH HOH . F 5 HOH A 7 507 92 HOH HOH . F 5 HOH A 8 508 6 HOH HOH . F 5 HOH A 9 509 11 HOH HOH . F 5 HOH A 10 510 38 HOH HOH . F 5 HOH A 11 511 69 HOH HOH . F 5 HOH A 12 512 35 HOH HOH . F 5 HOH A 13 513 20 HOH HOH . F 5 HOH A 14 514 21 HOH HOH . F 5 HOH A 15 515 16 HOH HOH . F 5 HOH A 16 516 73 HOH HOH . F 5 HOH A 17 517 36 HOH HOH . F 5 HOH A 18 518 33 HOH HOH . F 5 HOH A 19 519 2 HOH HOH . F 5 HOH A 20 520 61 HOH HOH . F 5 HOH A 21 521 41 HOH HOH . F 5 HOH A 22 522 118 HOH HOH . F 5 HOH A 23 523 27 HOH HOH . F 5 HOH A 24 524 7 HOH HOH . F 5 HOH A 25 525 8 HOH HOH . F 5 HOH A 26 526 58 HOH HOH . F 5 HOH A 27 527 15 HOH HOH . F 5 HOH A 28 528 114 HOH HOH . F 5 HOH A 29 529 1 HOH HOH . F 5 HOH A 30 530 110 HOH HOH . F 5 HOH A 31 531 71 HOH HOH . F 5 HOH A 32 532 18 HOH HOH . F 5 HOH A 33 533 83 HOH HOH . F 5 HOH A 34 534 28 HOH HOH . F 5 HOH A 35 535 101 HOH HOH . F 5 HOH A 36 536 56 HOH HOH . F 5 HOH A 37 537 29 HOH HOH . F 5 HOH A 38 538 74 HOH HOH . F 5 HOH A 39 539 14 HOH HOH . F 5 HOH A 40 540 3 HOH HOH . F 5 HOH A 41 541 42 HOH HOH . F 5 HOH A 42 542 67 HOH HOH . F 5 HOH A 43 543 65 HOH HOH . F 5 HOH A 44 544 96 HOH HOH . F 5 HOH A 45 545 44 HOH HOH . F 5 HOH A 46 546 104 HOH HOH . F 5 HOH A 47 547 23 HOH HOH . F 5 HOH A 48 548 39 HOH HOH . F 5 HOH A 49 549 64 HOH HOH . F 5 HOH A 50 550 87 HOH HOH . F 5 HOH A 51 551 5 HOH HOH . F 5 HOH A 52 552 75 HOH HOH . F 5 HOH A 53 553 66 HOH HOH . F 5 HOH A 54 554 26 HOH HOH . F 5 HOH A 55 555 84 HOH HOH . F 5 HOH A 56 556 95 HOH HOH . F 5 HOH A 57 557 90 HOH HOH . F 5 HOH A 58 558 13 HOH HOH . F 5 HOH A 59 559 120 HOH HOH . F 5 HOH A 60 560 52 HOH HOH . F 5 HOH A 61 561 70 HOH HOH . F 5 HOH A 62 562 79 HOH HOH . F 5 HOH A 63 563 22 HOH HOH . F 5 HOH A 64 564 77 HOH HOH . F 5 HOH A 65 565 85 HOH HOH . F 5 HOH A 66 566 40 HOH HOH . F 5 HOH A 67 567 81 HOH HOH . F 5 HOH A 68 568 10 HOH HOH . F 5 HOH A 69 569 24 HOH HOH . F 5 HOH A 70 570 25 HOH HOH . F 5 HOH A 71 571 4 HOH HOH . F 5 HOH A 72 572 31 HOH HOH . F 5 HOH A 73 573 32 HOH HOH . F 5 HOH A 74 574 46 HOH HOH . F 5 HOH A 75 575 113 HOH HOH . F 5 HOH A 76 576 50 HOH HOH . F 5 HOH A 77 577 9 HOH HOH . F 5 HOH A 78 578 37 HOH HOH . F 5 HOH A 79 579 60 HOH HOH . F 5 HOH A 80 580 76 HOH HOH . F 5 HOH A 81 581 117 HOH HOH . F 5 HOH A 82 582 43 HOH HOH . F 5 HOH A 83 583 19 HOH HOH . F 5 HOH A 84 584 102 HOH HOH . F 5 HOH A 85 585 30 HOH HOH . F 5 HOH A 86 586 62 HOH HOH . F 5 HOH A 87 587 108 HOH HOH . F 5 HOH A 88 588 59 HOH HOH . F 5 HOH A 89 589 12 HOH HOH . F 5 HOH A 90 590 93 HOH HOH . F 5 HOH A 91 591 86 HOH HOH . F 5 HOH A 92 592 68 HOH HOH . F 5 HOH A 93 593 48 HOH HOH . F 5 HOH A 94 594 89 HOH HOH . F 5 HOH A 95 595 53 HOH HOH . F 5 HOH A 96 596 98 HOH HOH . F 5 HOH A 97 597 100 HOH HOH . F 5 HOH A 98 598 82 HOH HOH . F 5 HOH A 99 599 121 HOH HOH . F 5 HOH A 100 600 94 HOH HOH . F 5 HOH A 101 601 63 HOH HOH . F 5 HOH A 102 602 111 HOH HOH . F 5 HOH A 103 603 124 HOH HOH . F 5 HOH A 104 604 122 HOH HOH . F 5 HOH A 105 605 109 HOH HOH . F 5 HOH A 106 606 125 HOH HOH . F 5 HOH A 107 607 105 HOH HOH . F 5 HOH A 108 608 123 HOH HOH . F 5 HOH A 109 609 51 HOH HOH . F 5 HOH A 110 610 34 HOH HOH . F 5 HOH A 111 611 119 HOH HOH . F 5 HOH A 112 612 88 HOH HOH . F 5 HOH A 113 613 99 HOH HOH . F 5 HOH A 114 614 112 HOH HOH . F 5 HOH A 115 615 57 HOH HOH . F 5 HOH A 116 616 126 HOH HOH . F 5 HOH A 117 617 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A6H . . . E 4 -12.691 15.49 -20.68 1 46.38 ? C10 A6H 404 A 1 HETATM 2 C C9 A6H . . . E 4 -12.345 13.412 -16.312 1 49.95 ? C9 A6H 404 A 1 HETATM 3 C C8 A6H . . . E 4 -12.253 12.074 -15.982 1 48.95 ? C8 A6H 404 A 1 HETATM 4 C C7 A6H . . . E 4 -11.155 11.352 -16.397 1 53.47 ? C7 A6H 404 A 1 HETATM 5 C C4 A6H . . . E 4 -11.366 14.04 -17.058 1 46.01 ? C4 A6H 404 A 1 HETATM 6 C C5 A6H . . . E 4 -10.274 13.292 -17.459 1 48.38 ? C5 A6H 404 A 1 HETATM 7 C C6 A6H . . . E 4 -10.16 11.953 -17.135 1 48.61 ? C6 A6H 404 A 1 HETATM 8 C C3 A6H . . . E 4 -11.925 15.884 -18.576 1 50.67 ? C3 A6H 404 A 1 HETATM 9 C C2 A6H . . . E 4 -12.011 17.26 -18.741 1 49.06 ? C2 A6H 404 A 1 HETATM 10 C C1 A6H . . . E 4 -12.464 17.744 -19.934 1 45.46 ? C1 A6H 404 A 1 HETATM 11 CL CL1 A6H . . . E 4 -13.717 14.325 -15.798 1 51.13 ? CL1 A6H 404 A 1 HETATM 12 CL CL A6H . . . E 4 -9.026 14.048 -18.387 1 52.1 ? CL A6H 404 A 1 HETATM 13 O O A6H . . . E 4 -11.485 15.429 -17.365 1 44.72 ? O A6H 404 A 1 HETATM 14 N N1 A6H . . . E 4 -12.254 15.014 -19.511 1 46.86 ? N1 A6H 404 A 1 HETATM 15 C C A6H . . . E 4 -12.813 16.842 -20.927 1 52.5 ? C A6H 404 A 1 HETATM 16 N N A6H . . . E 4 -13.269 17.258 -22.122 1 50.63 ? N A6H 404 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #