data_5OS2 # _model_server_result.job_id gV_wAQGFiP6OzLuA1yz5Hg _model_server_result.datetime_utc '2024-11-27 10:53:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5os2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5OS2 # _exptl.entry_id 5OS2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5OS2 _cell.length_a 81.8 _cell.length_b 81.8 _cell.length_c 174.2 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OS2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 135 A ASN 261 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc2 A OD2 ASP 148 A ASP 274 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc3 B O3B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc4 B O2A ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc5 B O1B ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc6 C MG MG . A MG 402 1_555 F O HOH . A HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc7 C MG MG . A MG 402 1_555 F O HOH . A HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc8 D MG MG . A MG 403 1_555 F O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc9 D MG MG . A MG 403 1_555 F O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc10 D MG MG . A MG 403 1_555 F O HOH . A HOH 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc11 D MG MG . A MG 403 1_555 F O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5OS2 _atom_sites.fract_transf_matrix[1][1] 0.012225 _atom_sites.fract_transf_matrix[1][2] 0.007058 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014116 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005741 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 1392 ADP ADP . C 3 MG A 1 402 1395 MG MG . D 3 MG A 1 403 1396 MG MG . E 4 A7K A 1 404 1 A7K FRG . F 5 HOH A 1 501 122 HOH HOH . F 5 HOH A 2 502 121 HOH HOH . F 5 HOH A 3 503 34 HOH HOH . F 5 HOH A 4 504 93 HOH HOH . F 5 HOH A 5 505 52 HOH HOH . F 5 HOH A 6 506 108 HOH HOH . F 5 HOH A 7 507 118 HOH HOH . F 5 HOH A 8 508 9 HOH HOH . F 5 HOH A 9 509 80 HOH HOH . F 5 HOH A 10 510 44 HOH HOH . F 5 HOH A 11 511 112 HOH HOH . F 5 HOH A 12 512 61 HOH HOH . F 5 HOH A 13 513 94 HOH HOH . F 5 HOH A 14 514 109 HOH HOH . F 5 HOH A 15 515 22 HOH HOH . F 5 HOH A 16 516 24 HOH HOH . F 5 HOH A 17 517 29 HOH HOH . F 5 HOH A 18 518 19 HOH HOH . F 5 HOH A 19 519 2 HOH HOH . F 5 HOH A 20 520 6 HOH HOH . F 5 HOH A 21 521 54 HOH HOH . F 5 HOH A 22 522 78 HOH HOH . F 5 HOH A 23 523 28 HOH HOH . F 5 HOH A 24 524 37 HOH HOH . F 5 HOH A 25 525 7 HOH HOH . F 5 HOH A 26 526 73 HOH HOH . F 5 HOH A 27 527 38 HOH HOH . F 5 HOH A 28 528 14 HOH HOH . F 5 HOH A 29 529 115 HOH HOH . F 5 HOH A 30 530 87 HOH HOH . F 5 HOH A 31 531 1 HOH HOH . F 5 HOH A 32 532 68 HOH HOH . F 5 HOH A 33 533 17 HOH HOH . F 5 HOH A 34 534 12 HOH HOH . F 5 HOH A 35 535 18 HOH HOH . F 5 HOH A 36 536 70 HOH HOH . F 5 HOH A 37 537 79 HOH HOH . F 5 HOH A 38 538 35 HOH HOH . F 5 HOH A 39 539 83 HOH HOH . F 5 HOH A 40 540 77 HOH HOH . F 5 HOH A 41 541 130 HOH HOH . F 5 HOH A 42 542 26 HOH HOH . F 5 HOH A 43 543 60 HOH HOH . F 5 HOH A 44 544 53 HOH HOH . F 5 HOH A 45 545 59 HOH HOH . F 5 HOH A 46 546 23 HOH HOH . F 5 HOH A 47 547 82 HOH HOH . F 5 HOH A 48 548 30 HOH HOH . F 5 HOH A 49 549 47 HOH HOH . F 5 HOH A 50 550 5 HOH HOH . F 5 HOH A 51 551 96 HOH HOH . F 5 HOH A 52 552 40 HOH HOH . F 5 HOH A 53 553 51 HOH HOH . F 5 HOH A 54 554 15 HOH HOH . F 5 HOH A 55 555 27 HOH HOH . F 5 HOH A 56 556 39 HOH HOH . F 5 HOH A 57 557 75 HOH HOH . F 5 HOH A 58 558 42 HOH HOH . F 5 HOH A 59 559 43 HOH HOH . F 5 HOH A 60 560 25 HOH HOH . F 5 HOH A 61 561 127 HOH HOH . F 5 HOH A 62 562 41 HOH HOH . F 5 HOH A 63 563 98 HOH HOH . F 5 HOH A 64 564 36 HOH HOH . F 5 HOH A 65 565 62 HOH HOH . F 5 HOH A 66 566 4 HOH HOH . F 5 HOH A 67 567 31 HOH HOH . F 5 HOH A 68 568 11 HOH HOH . F 5 HOH A 69 569 71 HOH HOH . F 5 HOH A 70 570 88 HOH HOH . F 5 HOH A 71 571 63 HOH HOH . F 5 HOH A 72 572 16 HOH HOH . F 5 HOH A 73 573 32 HOH HOH . F 5 HOH A 74 574 99 HOH HOH . F 5 HOH A 75 575 3 HOH HOH . F 5 HOH A 76 576 10 HOH HOH . F 5 HOH A 77 577 20 HOH HOH . F 5 HOH A 78 578 91 HOH HOH . F 5 HOH A 79 579 46 HOH HOH . F 5 HOH A 80 580 85 HOH HOH . F 5 HOH A 81 581 114 HOH HOH . F 5 HOH A 82 582 64 HOH HOH . F 5 HOH A 83 583 49 HOH HOH . F 5 HOH A 84 584 92 HOH HOH . F 5 HOH A 85 585 13 HOH HOH . F 5 HOH A 86 586 21 HOH HOH . F 5 HOH A 87 587 48 HOH HOH . F 5 HOH A 88 588 33 HOH HOH . F 5 HOH A 89 589 119 HOH HOH . F 5 HOH A 90 590 86 HOH HOH . F 5 HOH A 91 591 84 HOH HOH . F 5 HOH A 92 592 69 HOH HOH . F 5 HOH A 93 593 123 HOH HOH . F 5 HOH A 94 594 57 HOH HOH . F 5 HOH A 95 595 125 HOH HOH . F 5 HOH A 96 596 56 HOH HOH . F 5 HOH A 97 597 103 HOH HOH . F 5 HOH A 98 598 8 HOH HOH . F 5 HOH A 99 599 135 HOH HOH . F 5 HOH A 100 600 124 HOH HOH . F 5 HOH A 101 601 97 HOH HOH . F 5 HOH A 102 602 120 HOH HOH . F 5 HOH A 103 603 116 HOH HOH . F 5 HOH A 104 604 50 HOH HOH . F 5 HOH A 105 605 133 HOH HOH . F 5 HOH A 106 606 95 HOH HOH . F 5 HOH A 107 607 76 HOH HOH . F 5 HOH A 108 608 45 HOH HOH . F 5 HOH A 109 609 90 HOH HOH . F 5 HOH A 110 610 104 HOH HOH . F 5 HOH A 111 611 128 HOH HOH . F 5 HOH A 112 612 134 HOH HOH . F 5 HOH A 113 613 81 HOH HOH . F 5 HOH A 114 614 126 HOH HOH . F 5 HOH A 115 615 101 HOH HOH . F 5 HOH A 116 616 136 HOH HOH . F 5 HOH A 117 617 89 HOH HOH . F 5 HOH A 118 618 100 HOH HOH . F 5 HOH A 119 619 132 HOH HOH . F 5 HOH A 120 620 129 HOH HOH . F 5 HOH A 121 621 137 HOH HOH . F 5 HOH A 122 622 138 HOH HOH . F 5 HOH A 123 623 131 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -14.669 _atom_site.Cartn_y 22.733 _atom_site.Cartn_z -7.93 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 887 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #