data_5OS6 # _model_server_result.job_id xr73pt2X0lw7lq5eqhdhhQ _model_server_result.datetime_utc '2024-11-23 18:48:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5os6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 5OS6 # _exptl.entry_id 5OS6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 201.221 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6-phenoxypyridin-3-yl)methanol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5OS6 _cell.length_a 81.72 _cell.length_b 81.72 _cell.length_c 174.29 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OS6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 161 A THR 287 1_555 A N TPO 162 A TPO 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C TPO 162 A TPO 288 1_555 A N LEU 163 A LEU 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A OD1 ASN 135 A ASN 261 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc2 A OD2 ASP 148 A ASP 274 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc3 A OD1 ASP 148 A ASP 274 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc4 B O3B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc5 B O2A ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc6 B O1B ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc7 C MG MG . A MG 402 1_555 F O HOH . A HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc8 C MG MG . A MG 402 1_555 F O HOH . A HOH 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc9 D MG MG . A MG 403 1_555 F O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc10 D MG MG . A MG 403 1_555 F O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc11 D MG MG . A MG 403 1_555 F O HOH . A HOH 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? # _chem_comp.formula 'C12 H11 N O2' _chem_comp.formula_weight 201.221 _chem_comp.id A7Q _chem_comp.mon_nstd_flag . _chem_comp.name (6-phenoxypyridin-3-yl)methanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O A7Q sing 1 n n C C1 A7Q sing 2 n n C1 C11 A7Q doub 3 n y C1 C2 A7Q sing 4 n y C11 N A7Q sing 5 n y C2 C3 A7Q doub 6 n y N C4 A7Q doub 7 n y C3 C4 A7Q sing 8 n y C4 O1 A7Q sing 9 n n O1 C5 A7Q sing 10 n n C10 C5 A7Q doub 11 n y C10 C9 A7Q sing 12 n y C5 C6 A7Q sing 13 n y C9 C8 A7Q doub 14 n y C6 C7 A7Q doub 15 n y C8 C7 A7Q sing 16 n y C11 H1 A7Q sing 17 n n C10 H2 A7Q sing 18 n n C9 H3 A7Q sing 19 n n C8 H4 A7Q sing 20 n n C7 H5 A7Q sing 21 n n C6 H6 A7Q sing 22 n n C3 H7 A7Q sing 23 n n C2 H8 A7Q sing 24 n n O H9 A7Q sing 25 n n C H10 A7Q sing 26 n n C H11 A7Q sing 27 n n # _atom_sites.entry_id 5OS6 _atom_sites.fract_transf_matrix[1][1] 0.012237 _atom_sites.fract_transf_matrix[1][2] 0.007065 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005738 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 1392 ADP ADP . C 3 MG A 1 402 1395 MG MG . D 3 MG A 1 403 1396 MG MG . E 4 A7Q A 1 404 1 A7Q FRG . F 5 HOH A 1 501 61 HOH HOH . F 5 HOH A 2 502 32 HOH HOH . F 5 HOH A 3 503 7 HOH HOH . F 5 HOH A 4 504 41 HOH HOH . F 5 HOH A 5 505 30 HOH HOH . F 5 HOH A 6 506 26 HOH HOH . F 5 HOH A 7 507 24 HOH HOH . F 5 HOH A 8 508 8 HOH HOH . F 5 HOH A 9 509 19 HOH HOH . F 5 HOH A 10 510 11 HOH HOH . F 5 HOH A 11 511 56 HOH HOH . F 5 HOH A 12 512 14 HOH HOH . F 5 HOH A 13 513 35 HOH HOH . F 5 HOH A 14 514 12 HOH HOH . F 5 HOH A 15 515 54 HOH HOH . F 5 HOH A 16 516 34 HOH HOH . F 5 HOH A 17 517 13 HOH HOH . F 5 HOH A 18 518 39 HOH HOH . F 5 HOH A 19 519 22 HOH HOH . F 5 HOH A 20 520 17 HOH HOH . F 5 HOH A 21 521 5 HOH HOH . F 5 HOH A 22 522 51 HOH HOH . F 5 HOH A 23 523 27 HOH HOH . F 5 HOH A 24 524 3 HOH HOH . F 5 HOH A 25 525 28 HOH HOH . F 5 HOH A 26 526 4 HOH HOH . F 5 HOH A 27 527 9 HOH HOH . F 5 HOH A 28 528 52 HOH HOH . F 5 HOH A 29 529 37 HOH HOH . F 5 HOH A 30 530 29 HOH HOH . F 5 HOH A 31 531 16 HOH HOH . F 5 HOH A 32 532 20 HOH HOH . F 5 HOH A 33 533 33 HOH HOH . F 5 HOH A 34 534 10 HOH HOH . F 5 HOH A 35 535 2 HOH HOH . F 5 HOH A 36 536 18 HOH HOH . F 5 HOH A 37 537 23 HOH HOH . F 5 HOH A 38 538 42 HOH HOH . F 5 HOH A 39 539 6 HOH HOH . F 5 HOH A 40 540 31 HOH HOH . F 5 HOH A 41 541 15 HOH HOH . F 5 HOH A 42 542 50 HOH HOH . F 5 HOH A 43 543 48 HOH HOH . F 5 HOH A 44 544 40 HOH HOH . F 5 HOH A 45 545 21 HOH HOH . F 5 HOH A 46 546 62 HOH HOH . F 5 HOH A 47 547 46 HOH HOH . F 5 HOH A 48 548 43 HOH HOH . F 5 HOH A 49 549 47 HOH HOH . F 5 HOH A 50 550 45 HOH HOH . F 5 HOH A 51 551 38 HOH HOH . F 5 HOH A 52 552 65 HOH HOH . F 5 HOH A 53 553 63 HOH HOH . F 5 HOH A 54 554 49 HOH HOH . F 5 HOH A 55 555 1 HOH HOH . F 5 HOH A 56 556 67 HOH HOH . F 5 HOH A 57 557 36 HOH HOH . F 5 HOH A 58 558 53 HOH HOH . F 5 HOH A 59 559 64 HOH HOH . F 5 HOH A 60 560 25 HOH HOH . F 5 HOH A 61 561 55 HOH HOH . F 5 HOH A 62 562 59 HOH HOH . F 5 HOH A 63 563 66 HOH HOH . F 5 HOH A 64 564 44 HOH HOH . F 5 HOH A 65 565 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 A7Q . . . E 4 -12.773 15.111 -20.535 1 81.32 ? C11 A7Q 404 A 1 HETATM 2 C C10 A7Q . . . E 4 -9.996 12.99 -17.117 1 72.91 ? C10 A7Q 404 A 1 HETATM 3 C C9 A7Q . . . E 4 -10.195 11.776 -16.484 1 77.99 ? C9 A7Q 404 A 1 HETATM 4 C C8 A7Q . . . E 4 -11.341 11.559 -15.75 1 79.46 ? C8 A7Q 404 A 1 HETATM 5 C C7 A7Q . . . E 4 -12.295 12.55 -15.646 1 78.72 ? C7 A7Q 404 A 1 HETATM 6 C C4 A7Q . . . E 4 -11.378 15.587 -18.805 1 81.53 ? C4 A7Q 404 A 1 HETATM 7 C C5 A7Q . . . E 4 -10.956 13.973 -17.013 1 82.44 ? C5 A7Q 404 A 1 HETATM 8 C C6 A7Q . . . E 4 -12.1 13.767 -16.276 1 81.47 ? C6 A7Q 404 A 1 HETATM 9 C C3 A7Q . . . E 4 -11.116 16.848 -19.298 1 82.21 ? C3 A7Q 404 A 1 HETATM 10 C C2 A7Q . . . E 4 -11.723 17.225 -20.454 1 81.38 ? C2 A7Q 404 A 1 HETATM 11 C C1 A7Q . . . E 4 -12.576 16.357 -21.109 1 77.06 ? C1 A7Q 404 A 1 HETATM 12 O O A7Q . . . E 4 -14.422 17.553 -22.124 1 73.34 ? O A7Q 404 A 1 HETATM 13 C C A7Q . . . E 4 -13.262 16.757 -22.382 1 71.57 ? C A7Q 404 A 1 HETATM 14 N N A7Q . . . E 4 -12.179 14.729 -19.4 1 83.94 ? N A7Q 404 A 1 HETATM 15 O O1 A7Q . . . E 4 -10.739 15.226 -17.651 1 84.3 ? O1 A7Q 404 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #