data_5OSE # _model_server_result.job_id 2KXCvxWnzFIilA_0Ef0Fsg _model_server_result.datetime_utc '2024-10-21 23:22:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ose # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 5OSE # _exptl.entry_id 5OSE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 219.285 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl ~{N}-(5-ethylsulfanyl-1,3,4-thiadiazol-2-yl)carbamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5OSE _cell.length_a 81.97 _cell.length_b 81.97 _cell.length_c 175.26 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OSE _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 135 A ASN 261 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc2 A OD1 ASP 148 A ASP 274 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc3 A OD2 ASP 148 A ASP 274 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A C THR 161 A THR 287 1_555 A N TPO 162 A TPO 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C TPO 162 A TPO 288 1_555 A N LEU 163 A LEU 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? metalc ? metalc4 B O1B ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc5 B O3B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc6 B O2A ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc7 C MG MG . A MG 402 1_555 F O HOH . A HOH 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc8 C MG MG . A MG 402 1_555 F O HOH . A HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc9 D MG MG . A MG 403 1_555 F O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc10 D MG MG . A MG 403 1_555 F O HOH . A HOH 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc11 D MG MG . A MG 403 1_555 F O HOH . A HOH 579 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc12 D MG MG . A MG 403 1_555 F O HOH . A HOH 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? # _chem_comp.formula 'C6 H9 N3 O2 S2' _chem_comp.formula_weight 219.285 _chem_comp.id A98 _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl ~{N}-(5-ethylsulfanyl-1,3,4-thiadiazol-2-yl)carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5OSE _atom_sites.fract_transf_matrix[1][1] 0.0122 _atom_sites.fract_transf_matrix[1][2] 0.007043 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 1392 ADP ADP . C 3 MG A 1 402 1395 MG MG . D 3 MG A 1 403 1396 MG MG . E 4 A98 A 1 404 1 A98 FRG . F 5 HOH A 1 501 48 HOH HOH . F 5 HOH A 2 502 5 HOH HOH . F 5 HOH A 3 503 96 HOH HOH . F 5 HOH A 4 504 39 HOH HOH . F 5 HOH A 5 505 72 HOH HOH . F 5 HOH A 6 506 88 HOH HOH . F 5 HOH A 7 507 116 HOH HOH . F 5 HOH A 8 508 58 HOH HOH . F 5 HOH A 9 509 64 HOH HOH . F 5 HOH A 10 510 61 HOH HOH . F 5 HOH A 11 511 6 HOH HOH . F 5 HOH A 12 512 97 HOH HOH . F 5 HOH A 13 513 77 HOH HOH . F 5 HOH A 14 514 25 HOH HOH . F 5 HOH A 15 515 62 HOH HOH . F 5 HOH A 16 516 101 HOH HOH . F 5 HOH A 17 517 79 HOH HOH . F 5 HOH A 18 518 7 HOH HOH . F 5 HOH A 19 519 16 HOH HOH . F 5 HOH A 20 520 46 HOH HOH . F 5 HOH A 21 521 71 HOH HOH . F 5 HOH A 22 522 55 HOH HOH . F 5 HOH A 23 523 10 HOH HOH . F 5 HOH A 24 524 14 HOH HOH . F 5 HOH A 25 525 49 HOH HOH . F 5 HOH A 26 526 34 HOH HOH . F 5 HOH A 27 527 13 HOH HOH . F 5 HOH A 28 528 56 HOH HOH . F 5 HOH A 29 529 1 HOH HOH . F 5 HOH A 30 530 43 HOH HOH . F 5 HOH A 31 531 47 HOH HOH . F 5 HOH A 32 532 15 HOH HOH . F 5 HOH A 33 533 33 HOH HOH . F 5 HOH A 34 534 20 HOH HOH . F 5 HOH A 35 535 65 HOH HOH . F 5 HOH A 36 536 73 HOH HOH . F 5 HOH A 37 537 24 HOH HOH . F 5 HOH A 38 538 19 HOH HOH . F 5 HOH A 39 539 30 HOH HOH . F 5 HOH A 40 540 45 HOH HOH . F 5 HOH A 41 541 11 HOH HOH . F 5 HOH A 42 542 31 HOH HOH . F 5 HOH A 43 543 94 HOH HOH . F 5 HOH A 44 544 4 HOH HOH . F 5 HOH A 45 545 22 HOH HOH . F 5 HOH A 46 546 100 HOH HOH . F 5 HOH A 47 547 12 HOH HOH . F 5 HOH A 48 548 36 HOH HOH . F 5 HOH A 49 549 21 HOH HOH . F 5 HOH A 50 550 8 HOH HOH . F 5 HOH A 51 551 80 HOH HOH . F 5 HOH A 52 552 54 HOH HOH . F 5 HOH A 53 553 37 HOH HOH . F 5 HOH A 54 554 40 HOH HOH . F 5 HOH A 55 555 57 HOH HOH . F 5 HOH A 56 556 90 HOH HOH . F 5 HOH A 57 557 82 HOH HOH . F 5 HOH A 58 558 95 HOH HOH . F 5 HOH A 59 559 9 HOH HOH . F 5 HOH A 60 560 32 HOH HOH . F 5 HOH A 61 561 23 HOH HOH . F 5 HOH A 62 562 26 HOH HOH . F 5 HOH A 63 563 28 HOH HOH . F 5 HOH A 64 564 17 HOH HOH . F 5 HOH A 65 565 27 HOH HOH . F 5 HOH A 66 566 87 HOH HOH . F 5 HOH A 67 567 2 HOH HOH . F 5 HOH A 68 568 74 HOH HOH . F 5 HOH A 69 569 38 HOH HOH . F 5 HOH A 70 570 35 HOH HOH . F 5 HOH A 71 571 52 HOH HOH . F 5 HOH A 72 572 83 HOH HOH . F 5 HOH A 73 573 86 HOH HOH . F 5 HOH A 74 574 51 HOH HOH . F 5 HOH A 75 575 3 HOH HOH . F 5 HOH A 76 576 60 HOH HOH . F 5 HOH A 77 577 18 HOH HOH . F 5 HOH A 78 578 59 HOH HOH . F 5 HOH A 79 579 103 HOH HOH . F 5 HOH A 80 580 75 HOH HOH . F 5 HOH A 81 581 70 HOH HOH . F 5 HOH A 82 582 66 HOH HOH . F 5 HOH A 83 583 68 HOH HOH . F 5 HOH A 84 584 63 HOH HOH . F 5 HOH A 85 585 50 HOH HOH . F 5 HOH A 86 586 44 HOH HOH . F 5 HOH A 87 587 81 HOH HOH . F 5 HOH A 88 588 99 HOH HOH . F 5 HOH A 89 589 42 HOH HOH . F 5 HOH A 90 590 29 HOH HOH . F 5 HOH A 91 591 93 HOH HOH . F 5 HOH A 92 592 85 HOH HOH . F 5 HOH A 93 593 84 HOH HOH . F 5 HOH A 94 594 109 HOH HOH . F 5 HOH A 95 595 89 HOH HOH . F 5 HOH A 96 596 53 HOH HOH . F 5 HOH A 97 597 102 HOH HOH . F 5 HOH A 98 598 108 HOH HOH . F 5 HOH A 99 599 115 HOH HOH . F 5 HOH A 100 600 76 HOH HOH . F 5 HOH A 101 601 41 HOH HOH . F 5 HOH A 102 602 112 HOH HOH . F 5 HOH A 103 603 117 HOH HOH . F 5 HOH A 104 604 92 HOH HOH . F 5 HOH A 105 605 114 HOH HOH . F 5 HOH A 106 606 106 HOH HOH . F 5 HOH A 107 607 113 HOH HOH . F 5 HOH A 108 608 67 HOH HOH . F 5 HOH A 109 609 78 HOH HOH . F 5 HOH A 110 610 107 HOH HOH . F 5 HOH A 111 611 69 HOH HOH . F 5 HOH A 112 612 104 HOH HOH . F 5 HOH A 113 613 111 HOH HOH . F 5 HOH A 114 614 105 HOH HOH . F 5 HOH A 115 615 91 HOH HOH . F 5 HOH A 116 616 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 A98 . . . E 4 -2.397 30.235 -24.44 1 106.57 ? C4 A98 404 A 1 HETATM 2 C C5 A98 . . . E 4 -3.184 32.497 -24.79 1 108.23 ? C5 A98 404 A 1 HETATM 3 C C6 A98 . . . E 4 -4.443 34.452 -25.159 1 84.48 ? C6 A98 404 A 1 HETATM 4 C C3 A98 . . . E 4 -1.024 28.925 -22.814 1 91.45 ? C3 A98 404 A 1 HETATM 5 C C2 A98 . . . E 4 0.78 27.041 -21.961 1 68.34 ? C2 A98 404 A 1 HETATM 6 C C1 A98 . . . E 4 1.853 26.721 -20.954 1 65.11 ? C1 A98 404 A 1 HETATM 7 S S1 A98 . . . E 4 -0.052 28.554 -21.422 1 73.63 ? S1 A98 404 A 1 HETATM 8 N N1 A98 . . . E 4 -1.436 28.209 -23.854 1 87.17 ? N1 A98 404 A 1 HETATM 9 N N2 A98 . . . E 4 -2.235 28.959 -24.785 1 85.21 ? N2 A98 404 A 1 HETATM 10 S S2 A98 . . . E 4 -1.588 30.528 -22.96 1 141.32 ? S2 A98 404 A 1 HETATM 11 N N3 A98 . . . E 4 -3.117 31.183 -25.146 1 115.21 ? N3 A98 404 A 1 HETATM 12 O O1 A98 . . . E 4 -2.504 33.039 -23.949 1 103.86 ? O1 A98 404 A 1 HETATM 13 O O2 A98 . . . E 4 -4.146 33.087 -25.511 1 97.51 ? O2 A98 404 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 13 #