data_5OSI # _model_server_result.job_id Vnvo5FoWLaCKqzal7Y-KSA _model_server_result.datetime_utc '2025-02-05 10:49:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5osi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":803}' # _entry.id 5OSI # _exptl.entry_id 5OSI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.78 _cell.angle_gamma 90 _cell.entry_id 5OSI _cell.length_a 58.554 _cell.length_b 138.993 _cell.length_c 126.637 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,L,M,AA,BA 1 1 D,E,F,N,O,P,CA,DA 2 1 G,H,I,Q,R,S,EA,FA,GA 3 1 J,K,T,U,V,W,X,Y,Z,HA,IA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 Q N N ? 4 R N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5OSI _atom_sites.fract_transf_matrix[1][1] 0.017078 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00083 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 4 EDO A 1 201 9 EDO EDO . M 4 EDO B 1 801 3 EDO EDO . N 4 EDO D 1 201 1 EDO EDO . O 4 EDO D 1 202 7 EDO EDO . P 5 NA E 1 801 2 NA NA . Q 4 EDO G 1 201 4 EDO EDO . R 4 EDO H 1 801 11 EDO EDO . S 5 NA H 1 802 3 NA NA . T 4 EDO J 1 201 5 EDO EDO . U 4 EDO J 1 202 6 EDO EDO . V 4 EDO K 1 801 2 EDO EDO . W 4 EDO K 1 802 8 EDO EDO . X 4 EDO K 1 803 10 EDO EDO . Y 5 NA K 1 804 1 NA NA . Z 5 NA K 1 805 4 NA NA . AA 6 HOH A 1 301 17 HOH HOH . AA 6 HOH A 2 302 79 HOH HOH . AA 6 HOH A 3 303 9 HOH HOH . AA 6 HOH A 4 304 152 HOH HOH . AA 6 HOH A 5 305 214 HOH HOH . AA 6 HOH A 6 306 58 HOH HOH . AA 6 HOH A 7 307 126 HOH HOH . AA 6 HOH A 8 308 84 HOH HOH . AA 6 HOH A 9 309 66 HOH HOH . AA 6 HOH A 10 310 60 HOH HOH . AA 6 HOH A 11 311 189 HOH HOH . AA 6 HOH A 12 312 137 HOH HOH . AA 6 HOH A 13 313 85 HOH HOH . AA 6 HOH A 14 314 144 HOH HOH . AA 6 HOH A 15 315 76 HOH HOH . BA 6 HOH B 1 901 202 HOH HOH . BA 6 HOH B 2 902 47 HOH HOH . BA 6 HOH B 3 903 28 HOH HOH . BA 6 HOH B 4 904 169 HOH HOH . BA 6 HOH B 5 905 219 HOH HOH . BA 6 HOH B 6 906 171 HOH HOH . BA 6 HOH B 7 907 64 HOH HOH . BA 6 HOH B 8 908 163 HOH HOH . BA 6 HOH B 9 909 87 HOH HOH . BA 6 HOH B 10 910 119 HOH HOH . BA 6 HOH B 11 911 194 HOH HOH . BA 6 HOH B 12 912 121 HOH HOH . BA 6 HOH B 13 913 180 HOH HOH . BA 6 HOH B 14 914 153 HOH HOH . BA 6 HOH B 15 915 127 HOH HOH . BA 6 HOH B 16 916 73 HOH HOH . BA 6 HOH B 17 917 72 HOH HOH . BA 6 HOH B 18 918 80 HOH HOH . BA 6 HOH B 19 919 156 HOH HOH . BA 6 HOH B 20 920 23 HOH HOH . BA 6 HOH B 21 921 111 HOH HOH . BA 6 HOH B 22 922 208 HOH HOH . BA 6 HOH B 23 923 168 HOH HOH . BA 6 HOH B 24 924 205 HOH HOH . BA 6 HOH B 25 925 204 HOH HOH . BA 6 HOH B 26 926 218 HOH HOH . CA 6 HOH D 1 301 35 HOH HOH . CA 6 HOH D 2 302 6 HOH HOH . CA 6 HOH D 3 303 157 HOH HOH . CA 6 HOH D 4 304 49 HOH HOH . CA 6 HOH D 5 305 160 HOH HOH . CA 6 HOH D 6 306 97 HOH HOH . CA 6 HOH D 7 307 11 HOH HOH . CA 6 HOH D 8 308 165 HOH HOH . CA 6 HOH D 9 309 105 HOH HOH . CA 6 HOH D 10 310 41 HOH HOH . CA 6 HOH D 11 311 3 HOH HOH . CA 6 HOH D 12 312 179 HOH HOH . CA 6 HOH D 13 313 149 HOH HOH . CA 6 HOH D 14 314 154 HOH HOH . CA 6 HOH D 15 315 117 HOH HOH . CA 6 HOH D 16 316 135 HOH HOH . CA 6 HOH D 17 317 98 HOH HOH . CA 6 HOH D 18 318 65 HOH HOH . CA 6 HOH D 19 319 209 HOH HOH . CA 6 HOH D 20 320 143 HOH HOH . CA 6 HOH D 21 321 128 HOH HOH . CA 6 HOH D 22 322 59 HOH HOH . DA 6 HOH E 1 901 191 HOH HOH . DA 6 HOH E 2 902 81 HOH HOH . DA 6 HOH E 3 903 197 HOH HOH . DA 6 HOH E 4 904 33 HOH HOH . DA 6 HOH E 5 905 172 HOH HOH . DA 6 HOH E 6 906 82 HOH HOH . DA 6 HOH E 7 907 34 HOH HOH . DA 6 HOH E 8 908 27 HOH HOH . DA 6 HOH E 9 909 50 HOH HOH . DA 6 HOH E 10 910 185 HOH HOH . DA 6 HOH E 11 911 78 HOH HOH . DA 6 HOH E 12 912 46 HOH HOH . DA 6 HOH E 13 913 110 HOH HOH . DA 6 HOH E 14 914 220 HOH HOH . DA 6 HOH E 15 915 56 HOH HOH . DA 6 HOH E 16 916 29 HOH HOH . DA 6 HOH E 17 917 43 HOH HOH . DA 6 HOH E 18 918 99 HOH HOH . DA 6 HOH E 19 919 139 HOH HOH . DA 6 HOH E 20 920 176 HOH HOH . DA 6 HOH E 21 921 132 HOH HOH . DA 6 HOH E 22 922 145 HOH HOH . DA 6 HOH E 23 923 31 HOH HOH . DA 6 HOH E 24 924 25 HOH HOH . DA 6 HOH E 25 925 26 HOH HOH . DA 6 HOH E 26 926 174 HOH HOH . DA 6 HOH E 27 927 148 HOH HOH . DA 6 HOH E 28 928 195 HOH HOH . DA 6 HOH E 29 929 40 HOH HOH . DA 6 HOH E 30 930 30 HOH HOH . DA 6 HOH E 31 931 120 HOH HOH . DA 6 HOH E 32 932 12 HOH HOH . DA 6 HOH E 33 933 96 HOH HOH . DA 6 HOH E 34 934 133 HOH HOH . DA 6 HOH E 35 935 95 HOH HOH . DA 6 HOH E 36 936 188 HOH HOH . EA 6 HOH G 1 301 151 HOH HOH . EA 6 HOH G 2 302 14 HOH HOH . EA 6 HOH G 3 303 2 HOH HOH . EA 6 HOH G 4 304 109 HOH HOH . EA 6 HOH G 5 305 155 HOH HOH . EA 6 HOH G 6 306 167 HOH HOH . EA 6 HOH G 7 307 57 HOH HOH . EA 6 HOH G 8 308 20 HOH HOH . EA 6 HOH G 9 309 175 HOH HOH . EA 6 HOH G 10 310 53 HOH HOH . EA 6 HOH G 11 311 69 HOH HOH . EA 6 HOH G 12 312 130 HOH HOH . FA 6 HOH H 1 901 215 HOH HOH . FA 6 HOH H 2 902 131 HOH HOH . FA 6 HOH H 3 903 112 HOH HOH . FA 6 HOH H 4 904 159 HOH HOH . FA 6 HOH H 5 905 186 HOH HOH . FA 6 HOH H 6 906 24 HOH HOH . FA 6 HOH H 7 907 141 HOH HOH . FA 6 HOH H 8 908 207 HOH HOH . FA 6 HOH H 9 909 122 HOH HOH . FA 6 HOH H 10 910 13 HOH HOH . FA 6 HOH H 11 911 54 HOH HOH . FA 6 HOH H 12 912 88 HOH HOH . FA 6 HOH H 13 913 125 HOH HOH . FA 6 HOH H 14 914 124 HOH HOH . FA 6 HOH H 15 915 166 HOH HOH . FA 6 HOH H 16 916 221 HOH HOH . FA 6 HOH H 17 917 123 HOH HOH . GA 6 HOH I 1 201 161 HOH HOH . HA 6 HOH J 1 301 102 HOH HOH . HA 6 HOH J 2 302 5 HOH HOH . HA 6 HOH J 3 303 212 HOH HOH . HA 6 HOH J 4 304 140 HOH HOH . HA 6 HOH J 5 305 15 HOH HOH . HA 6 HOH J 6 306 164 HOH HOH . HA 6 HOH J 7 307 45 HOH HOH . HA 6 HOH J 8 308 21 HOH HOH . HA 6 HOH J 9 309 106 HOH HOH . HA 6 HOH J 10 310 101 HOH HOH . HA 6 HOH J 11 311 170 HOH HOH . HA 6 HOH J 12 312 7 HOH HOH . HA 6 HOH J 13 313 71 HOH HOH . HA 6 HOH J 14 314 210 HOH HOH . HA 6 HOH J 15 315 39 HOH HOH . HA 6 HOH J 16 316 136 HOH HOH . HA 6 HOH J 17 317 8 HOH HOH . HA 6 HOH J 18 318 1 HOH HOH . HA 6 HOH J 19 319 182 HOH HOH . HA 6 HOH J 20 320 63 HOH HOH . HA 6 HOH J 21 321 162 HOH HOH . HA 6 HOH J 22 322 38 HOH HOH . HA 6 HOH J 23 323 222 HOH HOH . HA 6 HOH J 24 324 77 HOH HOH . HA 6 HOH J 25 325 118 HOH HOH . HA 6 HOH J 26 326 92 HOH HOH . HA 6 HOH J 27 327 138 HOH HOH . HA 6 HOH J 28 328 224 HOH HOH . HA 6 HOH J 29 329 42 HOH HOH . HA 6 HOH J 30 330 158 HOH HOH . HA 6 HOH J 31 331 108 HOH HOH . HA 6 HOH J 32 332 187 HOH HOH . HA 6 HOH J 33 333 223 HOH HOH . IA 6 HOH K 1 901 18 HOH HOH . IA 6 HOH K 2 902 68 HOH HOH . IA 6 HOH K 3 903 193 HOH HOH . IA 6 HOH K 4 904 217 HOH HOH . IA 6 HOH K 5 905 51 HOH HOH . IA 6 HOH K 6 906 75 HOH HOH . IA 6 HOH K 7 907 226 HOH HOH . IA 6 HOH K 8 908 61 HOH HOH . IA 6 HOH K 9 909 150 HOH HOH . IA 6 HOH K 10 910 10 HOH HOH . IA 6 HOH K 11 911 206 HOH HOH . IA 6 HOH K 12 912 142 HOH HOH . IA 6 HOH K 13 913 93 HOH HOH . IA 6 HOH K 14 914 83 HOH HOH . IA 6 HOH K 15 915 70 HOH HOH . IA 6 HOH K 16 916 44 HOH HOH . IA 6 HOH K 17 917 86 HOH HOH . IA 6 HOH K 18 918 115 HOH HOH . IA 6 HOH K 19 919 4 HOH HOH . IA 6 HOH K 20 920 90 HOH HOH . IA 6 HOH K 21 921 147 HOH HOH . IA 6 HOH K 22 922 67 HOH HOH . IA 6 HOH K 23 923 52 HOH HOH . IA 6 HOH K 24 924 37 HOH HOH . IA 6 HOH K 25 925 113 HOH HOH . IA 6 HOH K 26 926 62 HOH HOH . IA 6 HOH K 27 927 173 HOH HOH . IA 6 HOH K 28 928 178 HOH HOH . IA 6 HOH K 29 929 48 HOH HOH . IA 6 HOH K 30 930 146 HOH HOH . IA 6 HOH K 31 931 199 HOH HOH . IA 6 HOH K 32 932 177 HOH HOH . IA 6 HOH K 33 933 36 HOH HOH . IA 6 HOH K 34 934 94 HOH HOH . IA 6 HOH K 35 935 89 HOH HOH . IA 6 HOH K 36 936 190 HOH HOH . IA 6 HOH K 37 937 184 HOH HOH . IA 6 HOH K 38 938 196 HOH HOH . IA 6 HOH K 39 939 134 HOH HOH . IA 6 HOH K 40 940 74 HOH HOH . IA 6 HOH K 41 941 22 HOH HOH . IA 6 HOH K 42 942 55 HOH HOH . IA 6 HOH K 43 943 183 HOH HOH . IA 6 HOH K 44 944 100 HOH HOH . IA 6 HOH K 45 945 107 HOH HOH . IA 6 HOH K 46 946 203 HOH HOH . IA 6 HOH K 47 947 19 HOH HOH . IA 6 HOH K 48 948 211 HOH HOH . IA 6 HOH K 49 949 16 HOH HOH . IA 6 HOH K 50 950 201 HOH HOH . IA 6 HOH K 51 951 225 HOH HOH . IA 6 HOH K 52 952 114 HOH HOH . IA 6 HOH K 53 953 129 HOH HOH . IA 6 HOH K 54 954 91 HOH HOH . IA 6 HOH K 55 955 181 HOH HOH . IA 6 HOH K 56 956 216 HOH HOH . IA 6 HOH K 57 957 103 HOH HOH . IA 6 HOH K 58 958 116 HOH HOH . IA 6 HOH K 59 959 32 HOH HOH . IA 6 HOH K 60 960 213 HOH HOH . IA 6 HOH K 61 961 192 HOH HOH . IA 6 HOH K 62 962 200 HOH HOH . IA 6 HOH K 63 963 104 HOH HOH . IA 6 HOH K 64 964 198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . X 4 41.372 3.067 -16.732 1 66.4 ? C1 EDO 803 K 1 HETATM 2 O O1 EDO . . . X 4 41.27 1.633 -16.713 1 66.44 ? O1 EDO 803 K 1 HETATM 3 C C2 EDO . . . X 4 42.79 3.526 -16.385 1 64.16 ? C2 EDO 803 K 1 HETATM 4 O O2 EDO . . . X 4 43.385 2.636 -15.427 1 61.06 ? O2 EDO 803 K 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #