data_5OSL # _model_server_result.job_id vZiT1fNo1x6AyJbPw7QTaQ _model_server_result.datetime_utc '2024-11-06 18:28:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5osl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 5OSL # _exptl.entry_id 5OSL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.11 _cell.angle_gamma 90 _cell.entry_id 5OSL _cell.length_a 58.609 _cell.length_b 46.395 _cell.length_c 62.761 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OSL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 160 A ASN 161 1_555 F MG MG . A MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc2 A OD1 ASP 174 A ASP 175 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc3 A OD2 ASP 174 A ASP 175 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc4 A OD2 ASP 174 A ASP 175 1_555 F MG MG . A MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc5 D O2B ADP . A ADP 403 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc6 D O3B ADP . A ADP 403 1_555 F MG MG . A MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc7 D O1A ADP . A ADP 403 1_555 F MG MG . A MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc8 E MG MG . A MG 404 1_555 J O HOH . A HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc9 E MG MG . A MG 404 1_555 J O HOH . A HOH 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc10 F MG MG . A MG 405 1_555 J O HOH . A HOH 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc11 F MG MG . A MG 405 1_555 J O HOH . A HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5OSL _atom_sites.fract_transf_matrix[1][1] 0.017062 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006932 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017198 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 401 1 ACT ACT . C 2 ACT A 1 402 2 ACT ACT . D 3 ADP A 1 403 1 ADP ADP . E 4 MG A 1 404 1 MG MG . F 4 MG A 1 405 2 MG MG . G 5 A9K A 1 406 1 A9K S52 . H 5 A9K A 1 407 2 A9K S52 . I 6 PO4 A 1 408 1 PO4 PO4 . J 7 HOH A 1 501 107 HOH HOH . J 7 HOH A 2 502 232 HOH HOH . J 7 HOH A 3 503 254 HOH HOH . J 7 HOH A 4 504 108 HOH HOH . J 7 HOH A 5 505 51 HOH HOH . J 7 HOH A 6 506 245 HOH HOH . J 7 HOH A 7 507 41 HOH HOH . J 7 HOH A 8 508 256 HOH HOH . J 7 HOH A 9 509 132 HOH HOH . J 7 HOH A 10 510 240 HOH HOH . J 7 HOH A 11 511 175 HOH HOH . J 7 HOH A 12 512 161 HOH HOH . J 7 HOH A 13 513 242 HOH HOH . J 7 HOH A 14 514 101 HOH HOH . J 7 HOH A 15 515 30 HOH HOH . J 7 HOH A 16 516 97 HOH HOH . J 7 HOH A 17 517 206 HOH HOH . J 7 HOH A 18 518 82 HOH HOH . J 7 HOH A 19 519 14 HOH HOH . J 7 HOH A 20 520 136 HOH HOH . J 7 HOH A 21 521 45 HOH HOH . J 7 HOH A 22 522 262 HOH HOH . J 7 HOH A 23 523 143 HOH HOH . J 7 HOH A 24 524 166 HOH HOH . J 7 HOH A 25 525 111 HOH HOH . J 7 HOH A 26 526 197 HOH HOH . J 7 HOH A 27 527 70 HOH HOH . J 7 HOH A 28 528 182 HOH HOH . J 7 HOH A 29 529 114 HOH HOH . J 7 HOH A 30 530 216 HOH HOH . J 7 HOH A 31 531 196 HOH HOH . J 7 HOH A 32 532 153 HOH HOH . J 7 HOH A 33 533 55 HOH HOH . J 7 HOH A 34 534 8 HOH HOH . J 7 HOH A 35 535 247 HOH HOH . J 7 HOH A 36 536 65 HOH HOH . J 7 HOH A 37 537 266 HOH HOH . J 7 HOH A 38 538 95 HOH HOH . J 7 HOH A 39 539 22 HOH HOH . J 7 HOH A 40 540 78 HOH HOH . J 7 HOH A 41 541 64 HOH HOH . J 7 HOH A 42 542 119 HOH HOH . J 7 HOH A 43 543 58 HOH HOH . J 7 HOH A 44 544 21 HOH HOH . J 7 HOH A 45 545 244 HOH HOH . J 7 HOH A 46 546 241 HOH HOH . J 7 HOH A 47 547 91 HOH HOH . J 7 HOH A 48 548 56 HOH HOH . J 7 HOH A 49 549 121 HOH HOH . J 7 HOH A 50 550 243 HOH HOH . J 7 HOH A 51 551 231 HOH HOH . J 7 HOH A 52 552 43 HOH HOH . J 7 HOH A 53 553 7 HOH HOH . J 7 HOH A 54 554 124 HOH HOH . J 7 HOH A 55 555 89 HOH HOH . J 7 HOH A 56 556 110 HOH HOH . J 7 HOH A 57 557 223 HOH HOH . J 7 HOH A 58 558 9 HOH HOH . J 7 HOH A 59 559 130 HOH HOH . J 7 HOH A 60 560 79 HOH HOH . J 7 HOH A 61 561 141 HOH HOH . J 7 HOH A 62 562 207 HOH HOH . J 7 HOH A 63 563 94 HOH HOH . J 7 HOH A 64 564 155 HOH HOH . J 7 HOH A 65 565 54 HOH HOH . J 7 HOH A 66 566 265 HOH HOH . J 7 HOH A 67 567 15 HOH HOH . J 7 HOH A 68 568 34 HOH HOH . J 7 HOH A 69 569 181 HOH HOH . J 7 HOH A 70 570 32 HOH HOH . J 7 HOH A 71 571 46 HOH HOH . J 7 HOH A 72 572 134 HOH HOH . J 7 HOH A 73 573 230 HOH HOH . J 7 HOH A 74 574 5 HOH HOH . J 7 HOH A 75 575 154 HOH HOH . J 7 HOH A 76 576 98 HOH HOH . J 7 HOH A 77 577 6 HOH HOH . J 7 HOH A 78 578 24 HOH HOH . J 7 HOH A 79 579 52 HOH HOH . J 7 HOH A 80 580 11 HOH HOH . J 7 HOH A 81 581 147 HOH HOH . J 7 HOH A 82 582 17 HOH HOH . J 7 HOH A 83 583 257 HOH HOH . J 7 HOH A 84 584 12 HOH HOH . J 7 HOH A 85 585 96 HOH HOH . J 7 HOH A 86 586 109 HOH HOH . J 7 HOH A 87 587 85 HOH HOH . J 7 HOH A 88 588 173 HOH HOH . J 7 HOH A 89 589 73 HOH HOH . J 7 HOH A 90 590 90 HOH HOH . J 7 HOH A 91 591 77 HOH HOH . J 7 HOH A 92 592 69 HOH HOH . J 7 HOH A 93 593 53 HOH HOH . J 7 HOH A 94 594 129 HOH HOH . J 7 HOH A 95 595 209 HOH HOH . J 7 HOH A 96 596 237 HOH HOH . J 7 HOH A 97 597 26 HOH HOH . J 7 HOH A 98 598 2 HOH HOH . J 7 HOH A 99 599 225 HOH HOH . J 7 HOH A 100 600 102 HOH HOH . J 7 HOH A 101 601 250 HOH HOH . J 7 HOH A 102 602 178 HOH HOH . J 7 HOH A 103 603 204 HOH HOH . J 7 HOH A 104 604 183 HOH HOH . J 7 HOH A 105 605 19 HOH HOH . J 7 HOH A 106 606 199 HOH HOH . J 7 HOH A 107 607 100 HOH HOH . J 7 HOH A 108 608 23 HOH HOH . J 7 HOH A 109 609 37 HOH HOH . J 7 HOH A 110 610 214 HOH HOH . J 7 HOH A 111 611 212 HOH HOH . J 7 HOH A 112 612 193 HOH HOH . J 7 HOH A 113 613 238 HOH HOH . J 7 HOH A 114 614 68 HOH HOH . J 7 HOH A 115 615 74 HOH HOH . J 7 HOH A 116 616 104 HOH HOH . J 7 HOH A 117 617 120 HOH HOH . J 7 HOH A 118 618 10 HOH HOH . J 7 HOH A 119 619 194 HOH HOH . J 7 HOH A 120 620 263 HOH HOH . J 7 HOH A 121 621 115 HOH HOH . J 7 HOH A 122 622 165 HOH HOH . J 7 HOH A 123 623 83 HOH HOH . J 7 HOH A 124 624 219 HOH HOH . J 7 HOH A 125 625 88 HOH HOH . J 7 HOH A 126 626 145 HOH HOH . J 7 HOH A 127 627 172 HOH HOH . J 7 HOH A 128 628 13 HOH HOH . J 7 HOH A 129 629 123 HOH HOH . J 7 HOH A 130 630 66 HOH HOH . J 7 HOH A 131 631 128 HOH HOH . J 7 HOH A 132 632 148 HOH HOH . J 7 HOH A 133 633 190 HOH HOH . J 7 HOH A 134 634 252 HOH HOH . J 7 HOH A 135 635 162 HOH HOH . J 7 HOH A 136 636 140 HOH HOH . J 7 HOH A 137 637 106 HOH HOH . J 7 HOH A 138 638 28 HOH HOH . J 7 HOH A 139 639 18 HOH HOH . J 7 HOH A 140 640 186 HOH HOH . J 7 HOH A 141 641 201 HOH HOH . J 7 HOH A 142 642 168 HOH HOH . J 7 HOH A 143 643 35 HOH HOH . J 7 HOH A 144 644 261 HOH HOH . J 7 HOH A 145 645 137 HOH HOH . J 7 HOH A 146 646 170 HOH HOH . J 7 HOH A 147 647 229 HOH HOH . J 7 HOH A 148 648 27 HOH HOH . J 7 HOH A 149 649 249 HOH HOH . J 7 HOH A 150 650 195 HOH HOH . J 7 HOH A 151 651 203 HOH HOH . J 7 HOH A 152 652 217 HOH HOH . J 7 HOH A 153 653 258 HOH HOH . J 7 HOH A 154 654 253 HOH HOH . J 7 HOH A 155 655 248 HOH HOH . J 7 HOH A 156 656 29 HOH HOH . J 7 HOH A 157 657 221 HOH HOH . J 7 HOH A 158 658 105 HOH HOH . J 7 HOH A 159 659 251 HOH HOH . J 7 HOH A 160 660 259 HOH HOH . J 7 HOH A 161 661 187 HOH HOH . J 7 HOH A 162 662 122 HOH HOH . J 7 HOH A 163 663 268 HOH HOH . J 7 HOH A 164 664 152 HOH HOH . J 7 HOH A 165 665 112 HOH HOH . J 7 HOH A 166 666 177 HOH HOH . J 7 HOH A 167 667 160 HOH HOH . J 7 HOH A 168 668 72 HOH HOH . J 7 HOH A 169 669 76 HOH HOH . J 7 HOH A 170 670 31 HOH HOH . J 7 HOH A 171 671 44 HOH HOH . J 7 HOH A 172 672 125 HOH HOH . J 7 HOH A 173 673 192 HOH HOH . J 7 HOH A 174 674 86 HOH HOH . J 7 HOH A 175 675 191 HOH HOH . J 7 HOH A 176 676 174 HOH HOH . J 7 HOH A 177 677 184 HOH HOH . J 7 HOH A 178 678 264 HOH HOH . J 7 HOH A 179 679 211 HOH HOH . J 7 HOH A 180 680 20 HOH HOH . J 7 HOH A 181 681 255 HOH HOH . J 7 HOH A 182 682 260 HOH HOH . J 7 HOH A 183 683 163 HOH HOH . J 7 HOH A 184 684 239 HOH HOH . J 7 HOH A 185 685 224 HOH HOH . J 7 HOH A 186 686 116 HOH HOH . J 7 HOH A 187 687 142 HOH HOH . J 7 HOH A 188 688 50 HOH HOH . J 7 HOH A 189 689 146 HOH HOH . J 7 HOH A 190 690 208 HOH HOH . J 7 HOH A 191 691 156 HOH HOH . J 7 HOH A 192 692 159 HOH HOH . J 7 HOH A 193 693 200 HOH HOH . J 7 HOH A 194 694 75 HOH HOH . J 7 HOH A 195 695 139 HOH HOH . J 7 HOH A 196 696 150 HOH HOH . J 7 HOH A 197 697 202 HOH HOH . J 7 HOH A 198 698 117 HOH HOH . J 7 HOH A 199 699 171 HOH HOH . J 7 HOH A 200 700 131 HOH HOH . J 7 HOH A 201 701 227 HOH HOH . J 7 HOH A 202 702 236 HOH HOH . J 7 HOH A 203 703 138 HOH HOH . J 7 HOH A 204 704 220 HOH HOH . J 7 HOH A 205 705 180 HOH HOH . J 7 HOH A 206 706 135 HOH HOH . J 7 HOH A 207 707 235 HOH HOH . J 7 HOH A 208 708 210 HOH HOH . J 7 HOH A 209 709 228 HOH HOH . J 7 HOH A 210 710 63 HOH HOH . J 7 HOH A 211 711 49 HOH HOH . J 7 HOH A 212 712 38 HOH HOH . J 7 HOH A 213 713 234 HOH HOH . J 7 HOH A 214 714 126 HOH HOH . J 7 HOH A 215 715 205 HOH HOH . J 7 HOH A 216 716 67 HOH HOH . J 7 HOH A 217 717 60 HOH HOH . J 7 HOH A 218 718 151 HOH HOH . J 7 HOH A 219 719 189 HOH HOH . J 7 HOH A 220 720 133 HOH HOH . J 7 HOH A 221 721 213 HOH HOH . J 7 HOH A 222 722 40 HOH HOH . J 7 HOH A 223 723 222 HOH HOH . J 7 HOH A 224 724 176 HOH HOH . J 7 HOH A 225 725 87 HOH HOH . J 7 HOH A 226 726 267 HOH HOH . J 7 HOH A 227 727 157 HOH HOH . J 7 HOH A 228 728 188 HOH HOH . J 7 HOH A 229 729 103 HOH HOH . J 7 HOH A 230 730 226 HOH HOH . J 7 HOH A 231 731 167 HOH HOH . J 7 HOH A 232 732 218 HOH HOH . J 7 HOH A 233 733 164 HOH HOH . J 7 HOH A 234 734 269 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -119.424 _atom_site.Cartn_y -183.343 _atom_site.Cartn_z 301.428 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.48 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 405 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #