data_5OTE
#
_model_server_result.job_id            d8dbe_0tpsDakCM4lnmIeQ 
_model_server_result.datetime_utc      '2024-10-28 02:21:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ote 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    5OTE 
#
_exptl.entry_id    5OTE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.86 
_cell.angle_gamma         90 
_cell.entry_id            5OTE 
_cell.length_a            114.53 
_cell.length_b            44.3 
_cell.length_c            90.94 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OTE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 135 n n 
C1 C2 EDO sing 136 n n 
C1 H11 EDO sing 137 n n 
C1 H12 EDO sing 138 n n 
O1 HO1 EDO sing 139 n n 
C2 O2 EDO sing 140 n n 
C2 H21 EDO sing 141 n n 
C2 H22 EDO sing 142 n n 
O2 HO2 EDO sing 143 n n 
#
_atom_sites.entry_id                     5OTE 
_atom_sites.fract_transf_matrix[1][1]    0.008731 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002646 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022573 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01149 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AQE A 1 501 501 AQE AQE . 
C 3 CL A 1 502 502 CL CL . 
D 4 EDO A 1 503 503 EDO EDO . 
E 5 HOH A 1 601 601 HOH HOH . 
E 5 HOH A 2 602 602 HOH HOH . 
E 5 HOH A 3 603 603 HOH HOH . 
E 5 HOH A 4 604 604 HOH HOH . 
E 5 HOH A 5 605 605 HOH HOH . 
E 5 HOH A 6 606 606 HOH HOH . 
E 5 HOH A 7 607 607 HOH HOH . 
E 5 HOH A 8 608 608 HOH HOH . 
E 5 HOH A 9 609 609 HOH HOH . 
E 5 HOH A 10 610 610 HOH HOH . 
E 5 HOH A 11 611 611 HOH HOH . 
E 5 HOH A 12 612 612 HOH HOH . 
E 5 HOH A 13 613 613 HOH HOH . 
E 5 HOH A 14 614 614 HOH HOH . 
E 5 HOH A 15 615 615 HOH HOH . 
E 5 HOH A 16 616 616 HOH HOH . 
E 5 HOH A 17 617 617 HOH HOH . 
E 5 HOH A 18 618 618 HOH HOH . 
E 5 HOH A 19 619 619 HOH HOH . 
E 5 HOH A 20 620 620 HOH HOH . 
E 5 HOH A 21 621 621 HOH HOH . 
E 5 HOH A 22 622 622 HOH HOH . 
E 5 HOH A 23 623 623 HOH HOH . 
E 5 HOH A 24 624 624 HOH HOH . 
E 5 HOH A 25 625 625 HOH HOH . 
E 5 HOH A 26 626 626 HOH HOH . 
E 5 HOH A 27 627 627 HOH HOH . 
E 5 HOH A 28 628 628 HOH HOH . 
E 5 HOH A 29 629 762 HOH HOH . 
E 5 HOH A 30 630 629 HOH HOH . 
E 5 HOH A 31 631 630 HOH HOH . 
E 5 HOH A 32 632 631 HOH HOH . 
E 5 HOH A 33 633 632 HOH HOH . 
E 5 HOH A 34 634 633 HOH HOH . 
E 5 HOH A 35 635 634 HOH HOH . 
E 5 HOH A 36 636 635 HOH HOH . 
E 5 HOH A 37 637 636 HOH HOH . 
E 5 HOH A 38 638 637 HOH HOH . 
E 5 HOH A 39 639 638 HOH HOH . 
E 5 HOH A 40 640 639 HOH HOH . 
E 5 HOH A 41 641 640 HOH HOH . 
E 5 HOH A 42 642 641 HOH HOH . 
E 5 HOH A 43 643 642 HOH HOH . 
E 5 HOH A 44 644 643 HOH HOH . 
E 5 HOH A 45 645 644 HOH HOH . 
E 5 HOH A 46 646 645 HOH HOH . 
E 5 HOH A 47 647 646 HOH HOH . 
E 5 HOH A 48 648 647 HOH HOH . 
E 5 HOH A 49 649 648 HOH HOH . 
E 5 HOH A 50 650 649 HOH HOH . 
E 5 HOH A 51 651 650 HOH HOH . 
E 5 HOH A 52 652 651 HOH HOH . 
E 5 HOH A 53 653 652 HOH HOH . 
E 5 HOH A 54 654 653 HOH HOH . 
E 5 HOH A 55 655 654 HOH HOH . 
E 5 HOH A 56 656 655 HOH HOH . 
E 5 HOH A 57 657 656 HOH HOH . 
E 5 HOH A 58 658 657 HOH HOH . 
E 5 HOH A 59 659 658 HOH HOH . 
E 5 HOH A 60 660 659 HOH HOH . 
E 5 HOH A 61 661 660 HOH HOH . 
E 5 HOH A 62 662 661 HOH HOH . 
E 5 HOH A 63 663 662 HOH HOH . 
E 5 HOH A 64 664 663 HOH HOH . 
E 5 HOH A 65 665 664 HOH HOH . 
E 5 HOH A 66 666 665 HOH HOH . 
E 5 HOH A 67 667 666 HOH HOH . 
E 5 HOH A 68 668 667 HOH HOH . 
E 5 HOH A 69 669 668 HOH HOH . 
E 5 HOH A 70 670 669 HOH HOH . 
E 5 HOH A 71 671 670 HOH HOH . 
E 5 HOH A 72 672 671 HOH HOH . 
E 5 HOH A 73 673 672 HOH HOH . 
E 5 HOH A 74 674 673 HOH HOH . 
E 5 HOH A 75 675 674 HOH HOH . 
E 5 HOH A 76 676 675 HOH HOH . 
E 5 HOH A 77 677 676 HOH HOH . 
E 5 HOH A 78 678 677 HOH HOH . 
E 5 HOH A 79 679 678 HOH HOH . 
E 5 HOH A 80 680 679 HOH HOH . 
E 5 HOH A 81 681 680 HOH HOH . 
E 5 HOH A 82 682 681 HOH HOH . 
E 5 HOH A 83 683 682 HOH HOH . 
E 5 HOH A 84 684 683 HOH HOH . 
E 5 HOH A 85 685 684 HOH HOH . 
E 5 HOH A 86 686 685 HOH HOH . 
E 5 HOH A 87 687 686 HOH HOH . 
E 5 HOH A 88 688 687 HOH HOH . 
E 5 HOH A 89 689 688 HOH HOH . 
E 5 HOH A 90 690 689 HOH HOH . 
E 5 HOH A 91 691 690 HOH HOH . 
E 5 HOH A 92 692 691 HOH HOH . 
E 5 HOH A 93 693 692 HOH HOH . 
E 5 HOH A 94 694 693 HOH HOH . 
E 5 HOH A 95 695 694 HOH HOH . 
E 5 HOH A 96 696 695 HOH HOH . 
E 5 HOH A 97 697 696 HOH HOH . 
E 5 HOH A 98 698 697 HOH HOH . 
E 5 HOH A 99 699 698 HOH HOH . 
E 5 HOH A 100 700 699 HOH HOH . 
E 5 HOH A 101 701 700 HOH HOH . 
E 5 HOH A 102 702 701 HOH HOH . 
E 5 HOH A 103 703 702 HOH HOH . 
E 5 HOH A 104 704 703 HOH HOH . 
E 5 HOH A 105 705 704 HOH HOH . 
E 5 HOH A 106 706 705 HOH HOH . 
E 5 HOH A 107 707 706 HOH HOH . 
E 5 HOH A 108 708 707 HOH HOH . 
E 5 HOH A 109 709 708 HOH HOH . 
E 5 HOH A 110 710 709 HOH HOH . 
E 5 HOH A 111 711 710 HOH HOH . 
E 5 HOH A 112 712 711 HOH HOH . 
E 5 HOH A 113 713 712 HOH HOH . 
E 5 HOH A 114 714 713 HOH HOH . 
E 5 HOH A 115 715 714 HOH HOH . 
E 5 HOH A 116 716 715 HOH HOH . 
E 5 HOH A 117 717 716 HOH HOH . 
E 5 HOH A 118 718 717 HOH HOH . 
E 5 HOH A 119 719 718 HOH HOH . 
E 5 HOH A 120 720 719 HOH HOH . 
E 5 HOH A 121 721 720 HOH HOH . 
E 5 HOH A 122 722 721 HOH HOH . 
E 5 HOH A 123 723 722 HOH HOH . 
E 5 HOH A 124 724 723 HOH HOH . 
E 5 HOH A 125 725 724 HOH HOH . 
E 5 HOH A 126 726 725 HOH HOH . 
E 5 HOH A 127 727 726 HOH HOH . 
E 5 HOH A 128 728 727 HOH HOH . 
E 5 HOH A 129 729 728 HOH HOH . 
E 5 HOH A 130 730 729 HOH HOH . 
E 5 HOH A 131 731 730 HOH HOH . 
E 5 HOH A 132 732 731 HOH HOH . 
E 5 HOH A 133 733 732 HOH HOH . 
E 5 HOH A 134 734 733 HOH HOH . 
E 5 HOH A 135 735 734 HOH HOH . 
E 5 HOH A 136 736 735 HOH HOH . 
E 5 HOH A 137 737 736 HOH HOH . 
E 5 HOH A 138 738 737 HOH HOH . 
E 5 HOH A 139 739 738 HOH HOH . 
E 5 HOH A 140 740 739 HOH HOH . 
E 5 HOH A 141 741 740 HOH HOH . 
E 5 HOH A 142 742 741 HOH HOH . 
E 5 HOH A 143 743 742 HOH HOH . 
E 5 HOH A 144 744 743 HOH HOH . 
E 5 HOH A 145 745 744 HOH HOH . 
E 5 HOH A 146 746 745 HOH HOH . 
E 5 HOH A 147 747 746 HOH HOH . 
E 5 HOH A 148 748 747 HOH HOH . 
E 5 HOH A 149 749 748 HOH HOH . 
E 5 HOH A 150 750 749 HOH HOH . 
E 5 HOH A 151 751 750 HOH HOH . 
E 5 HOH A 152 752 751 HOH HOH . 
E 5 HOH A 153 753 752 HOH HOH . 
E 5 HOH A 154 754 753 HOH HOH . 
E 5 HOH A 155 755 754 HOH HOH . 
E 5 HOH A 156 756 755 HOH HOH . 
E 5 HOH A 157 757 756 HOH HOH . 
E 5 HOH A 158 758 757 HOH HOH . 
E 5 HOH A 159 759 758 HOH HOH . 
E 5 HOH A 160 760 759 HOH HOH . 
E 5 HOH A 161 761 760 HOH HOH . 
E 5 HOH A 162 762 761 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 16.092 9.367 19.981 1 46.14 ? C1 EDO 503 A 1 
HETATM 2 O O1 EDO . . . D 4 16.347 8.212 20.817 1 51.26 ? O1 EDO 503 A 1 
HETATM 3 C C2 EDO . . . D 4 17.009 9.276 18.776 1 42.98 ? C2 EDO 503 A 1 
HETATM 4 O O2 EDO . . . D 4 18.303 9.812 19.141 1 45.6 ? O2 EDO 503 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           225 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#