data_5OTG # _model_server_result.job_id FKSIbezk7iZMoTljP_wOZA _model_server_result.datetime_utc '2025-06-27 13:59:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5otg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5OTG # _exptl.entry_id 5OTG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.245 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[2-[[2-(isoquinolin-5-ylsulfonylamino)ethylamino]methyl]phenyl]boronic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OTG _cell.length_a 109.381 _cell.length_b 59.167 _cell.length_c 74.223 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OTG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 12 A GLY 9 1_555 A N SEP 13 A SEP 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C SEP 13 A SEP 10 1_555 A N GLU 14 A GLU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C PHE 141 A PHE 138 1_555 A N SEP 142 A SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale4 A C SEP 142 A SEP 139 1_555 A N GLU 143 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale5 A C TRP 199 A TRP 196 1_555 A N TPO 200 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale6 A C TPO 200 A TPO 197 1_555 A N LEU 201 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 A C VAL 340 A VAL 337 1_555 A N SEP 341 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 A C SEP 341 A SEP 338 1_555 A N ILE 342 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C18 H20 B N3 O4 S' _chem_comp.formula_weight 385.245 _chem_comp.id AO8 _chem_comp.mon_nstd_flag . _chem_comp.name '[2-[[2-(isoquinolin-5-ylsulfonylamino)ethylamino]methyl]phenyl]boronic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 AO8 doub 13 n y C2 C1 AO8 sing 14 n y C3 C4 AO8 sing 15 n y C1 C AO8 doub 16 n y C17 C16 AO8 doub 17 n y C17 C12 AO8 sing 18 n y C16 C15 AO8 sing 19 n y C11 C12 AO8 sing 20 n n C11 N2 AO8 sing 21 n n C12 C13 AO8 doub 22 n y C9 N1 AO8 sing 23 n n C9 C10 AO8 sing 24 n n C15 C14 AO8 doub 25 n y C13 C14 AO8 sing 26 n y N1 S AO8 sing 27 n n C4 C8 AO8 doub 28 n y C4 C5 AO8 sing 29 n y C C5 AO8 sing 30 n y C S AO8 sing 31 n n C10 N2 AO8 sing 32 n n C8 N AO8 sing 33 n y C5 C6 AO8 doub 34 n y S O AO8 doub 35 n n S O3 AO8 doub 36 n n N C7 AO8 doub 37 n y C6 C7 AO8 sing 38 n y C6 H1 AO8 sing 39 n n C7 H2 AO8 sing 40 n n C8 H3 AO8 sing 41 n n C3 H4 AO8 sing 42 n n C2 H5 AO8 sing 43 n n C1 H6 AO8 sing 44 n n N1 H7 AO8 sing 45 n n C9 H8 AO8 sing 46 n n C9 H9 AO8 sing 47 n n C10 H10 AO8 sing 48 n n C10 H11 AO8 sing 49 n n N2 H12 AO8 sing 50 n n C11 H14 AO8 sing 51 n n C11 H15 AO8 sing 52 n n C16 H17 AO8 sing 53 n n C15 H18 AO8 sing 54 n n C14 H19 AO8 sing 55 n n C13 H20 AO8 sing 56 n n C17 B1 AO8 sing 57 n n B1 O1 AO8 sing 58 n n B1 O2 AO8 sing 59 n n O1 H13 AO8 sing 60 n n O2 H16 AO8 sing 61 n n # _atom_sites.entry_id 5OTG _atom_sites.fract_transf_matrix[1][1] 0.009142 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016901 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 AO8 A 1 401 1 AO8 BFF . D 4 HOH A 1 501 162 HOH HOH . D 4 HOH A 2 502 68 HOH HOH . D 4 HOH A 3 503 37 HOH HOH . D 4 HOH A 4 504 49 HOH HOH . D 4 HOH A 5 505 77 HOH HOH . D 4 HOH A 6 506 168 HOH HOH . D 4 HOH A 7 507 181 HOH HOH . D 4 HOH A 8 508 167 HOH HOH . D 4 HOH A 9 509 67 HOH HOH . D 4 HOH A 10 510 92 HOH HOH . D 4 HOH A 11 511 63 HOH HOH . D 4 HOH A 12 512 178 HOH HOH . D 4 HOH A 13 513 26 HOH HOH . D 4 HOH A 14 514 194 HOH HOH . D 4 HOH A 15 515 64 HOH HOH . D 4 HOH A 16 516 65 HOH HOH . D 4 HOH A 17 517 43 HOH HOH . D 4 HOH A 18 518 119 HOH HOH . D 4 HOH A 19 519 192 HOH HOH . D 4 HOH A 20 520 27 HOH HOH . D 4 HOH A 21 521 128 HOH HOH . D 4 HOH A 22 522 110 HOH HOH . D 4 HOH A 23 523 111 HOH HOH . D 4 HOH A 24 524 84 HOH HOH . D 4 HOH A 25 525 16 HOH HOH . D 4 HOH A 26 526 175 HOH HOH . D 4 HOH A 27 527 123 HOH HOH . D 4 HOH A 28 528 2 HOH HOH . D 4 HOH A 29 529 147 HOH HOH . D 4 HOH A 30 530 129 HOH HOH . D 4 HOH A 31 531 47 HOH HOH . D 4 HOH A 32 532 61 HOH HOH . D 4 HOH A 33 533 164 HOH HOH . D 4 HOH A 34 534 104 HOH HOH . D 4 HOH A 35 535 51 HOH HOH . D 4 HOH A 36 536 11 HOH HOH . D 4 HOH A 37 537 53 HOH HOH . D 4 HOH A 38 538 179 HOH HOH . D 4 HOH A 39 539 21 HOH HOH . D 4 HOH A 40 540 14 HOH HOH . D 4 HOH A 41 541 132 HOH HOH . D 4 HOH A 42 542 48 HOH HOH . D 4 HOH A 43 543 66 HOH HOH . D 4 HOH A 44 544 7 HOH HOH . D 4 HOH A 45 545 115 HOH HOH . D 4 HOH A 46 546 91 HOH HOH . D 4 HOH A 47 547 28 HOH HOH . D 4 HOH A 48 548 187 HOH HOH . D 4 HOH A 49 549 15 HOH HOH . D 4 HOH A 50 550 40 HOH HOH . D 4 HOH A 51 551 156 HOH HOH . D 4 HOH A 52 552 36 HOH HOH . D 4 HOH A 53 553 32 HOH HOH . D 4 HOH A 54 554 184 HOH HOH . D 4 HOH A 55 555 116 HOH HOH . D 4 HOH A 56 556 72 HOH HOH . D 4 HOH A 57 557 200 HOH HOH . D 4 HOH A 58 558 10 HOH HOH . D 4 HOH A 59 559 24 HOH HOH . D 4 HOH A 60 560 102 HOH HOH . D 4 HOH A 61 561 34 HOH HOH . D 4 HOH A 62 562 130 HOH HOH . D 4 HOH A 63 563 70 HOH HOH . D 4 HOH A 64 564 56 HOH HOH . D 4 HOH A 65 565 3 HOH HOH . D 4 HOH A 66 566 86 HOH HOH . D 4 HOH A 67 567 17 HOH HOH . D 4 HOH A 68 568 75 HOH HOH . D 4 HOH A 69 569 59 HOH HOH . D 4 HOH A 70 570 71 HOH HOH . D 4 HOH A 71 571 76 HOH HOH . D 4 HOH A 72 572 19 HOH HOH . D 4 HOH A 73 573 148 HOH HOH . D 4 HOH A 74 574 80 HOH HOH . D 4 HOH A 75 575 1 HOH HOH . D 4 HOH A 76 576 196 HOH HOH . D 4 HOH A 77 577 113 HOH HOH . D 4 HOH A 78 578 74 HOH HOH . D 4 HOH A 79 579 30 HOH HOH . D 4 HOH A 80 580 140 HOH HOH . D 4 HOH A 81 581 100 HOH HOH . D 4 HOH A 82 582 45 HOH HOH . D 4 HOH A 83 583 33 HOH HOH . D 4 HOH A 84 584 73 HOH HOH . D 4 HOH A 85 585 69 HOH HOH . D 4 HOH A 86 586 29 HOH HOH . D 4 HOH A 87 587 177 HOH HOH . D 4 HOH A 88 588 127 HOH HOH . D 4 HOH A 89 589 107 HOH HOH . D 4 HOH A 90 590 206 HOH HOH . D 4 HOH A 91 591 8 HOH HOH . D 4 HOH A 92 592 78 HOH HOH . D 4 HOH A 93 593 165 HOH HOH . D 4 HOH A 94 594 93 HOH HOH . D 4 HOH A 95 595 174 HOH HOH . D 4 HOH A 96 596 25 HOH HOH . D 4 HOH A 97 597 141 HOH HOH . D 4 HOH A 98 598 39 HOH HOH . D 4 HOH A 99 599 133 HOH HOH . D 4 HOH A 100 600 105 HOH HOH . D 4 HOH A 101 601 109 HOH HOH . D 4 HOH A 102 602 99 HOH HOH . D 4 HOH A 103 603 120 HOH HOH . D 4 HOH A 104 604 151 HOH HOH . D 4 HOH A 105 605 81 HOH HOH . D 4 HOH A 106 606 44 HOH HOH . D 4 HOH A 107 607 18 HOH HOH . D 4 HOH A 108 608 103 HOH HOH . D 4 HOH A 109 609 197 HOH HOH . D 4 HOH A 110 610 46 HOH HOH . D 4 HOH A 111 611 31 HOH HOH . D 4 HOH A 112 612 101 HOH HOH . D 4 HOH A 113 613 98 HOH HOH . D 4 HOH A 114 614 60 HOH HOH . D 4 HOH A 115 615 57 HOH HOH . D 4 HOH A 116 616 97 HOH HOH . D 4 HOH A 117 617 131 HOH HOH . D 4 HOH A 118 618 145 HOH HOH . D 4 HOH A 119 619 186 HOH HOH . D 4 HOH A 120 620 90 HOH HOH . D 4 HOH A 121 621 149 HOH HOH . D 4 HOH A 122 622 62 HOH HOH . D 4 HOH A 123 623 58 HOH HOH . D 4 HOH A 124 624 190 HOH HOH . D 4 HOH A 125 625 126 HOH HOH . D 4 HOH A 126 626 198 HOH HOH . D 4 HOH A 127 627 41 HOH HOH . D 4 HOH A 128 628 173 HOH HOH . D 4 HOH A 129 629 153 HOH HOH . D 4 HOH A 130 630 22 HOH HOH . D 4 HOH A 131 631 12 HOH HOH . D 4 HOH A 132 632 54 HOH HOH . D 4 HOH A 133 633 106 HOH HOH . D 4 HOH A 134 634 170 HOH HOH . D 4 HOH A 135 635 87 HOH HOH . D 4 HOH A 136 636 9 HOH HOH . D 4 HOH A 137 637 13 HOH HOH . D 4 HOH A 138 638 205 HOH HOH . D 4 HOH A 139 639 88 HOH HOH . D 4 HOH A 140 640 122 HOH HOH . D 4 HOH A 141 641 142 HOH HOH . D 4 HOH A 142 642 135 HOH HOH . D 4 HOH A 143 643 38 HOH HOH . D 4 HOH A 144 644 202 HOH HOH . D 4 HOH A 145 645 146 HOH HOH . D 4 HOH A 146 646 204 HOH HOH . D 4 HOH A 147 647 203 HOH HOH . D 4 HOH A 148 648 117 HOH HOH . D 4 HOH A 149 649 79 HOH HOH . D 4 HOH A 150 650 136 HOH HOH . D 4 HOH A 151 651 114 HOH HOH . D 4 HOH A 152 652 52 HOH HOH . D 4 HOH A 153 653 191 HOH HOH . D 4 HOH A 154 654 169 HOH HOH . D 4 HOH A 155 655 158 HOH HOH . D 4 HOH A 156 656 182 HOH HOH . D 4 HOH A 157 657 144 HOH HOH . D 4 HOH A 158 658 193 HOH HOH . E 4 HOH D 1 101 188 HOH HOH . E 4 HOH D 2 102 195 HOH HOH . E 4 HOH D 3 103 189 HOH HOH . E 4 HOH D 4 104 163 HOH HOH . E 4 HOH D 5 105 166 HOH HOH . E 4 HOH D 6 106 23 HOH HOH . E 4 HOH D 7 107 20 HOH HOH . E 4 HOH D 8 108 201 HOH HOH . E 4 HOH D 9 109 185 HOH HOH . E 4 HOH D 10 110 176 HOH HOH . E 4 HOH D 11 111 183 HOH HOH . E 4 HOH D 12 112 143 HOH HOH . E 4 HOH D 13 113 172 HOH HOH . E 4 HOH D 14 114 161 HOH HOH . E 4 HOH D 15 115 180 HOH HOH . E 4 HOH D 16 116 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 AO8 . . . C 3 -26.944 -13.352 26.471 1 32.53 ? O3 AO8 401 A 1 HETATM 2 S S AO8 . . . C 3 -27.685 -13.903 25.378 1 33.87 ? S AO8 401 A 1 HETATM 3 O O AO8 . . . C 3 -28.948 -14.528 25.627 1 38.74 ? O AO8 401 A 1 HETATM 4 C C AO8 . . . C 3 -26.654 -15.074 24.533 1 28.47 ? C AO8 401 A 1 HETATM 5 C C5 AO8 . . . C 3 -25.75 -15.925 25.244 1 30.88 ? C5 AO8 401 A 1 HETATM 6 C C6 AO8 . . . C 3 -25.619 -15.968 26.651 1 27.5 ? C6 AO8 401 A 1 HETATM 7 C C7 AO8 . . . C 3 -24.7 -16.806 27.211 1 28.09 ? C7 AO8 401 A 1 HETATM 8 N N AO8 . . . C 3 -23.882 -17.605 26.509 1 25.79 ? N AO8 401 A 1 HETATM 9 C C8 AO8 . . . C 3 -23.993 -17.587 25.188 1 26.45 ? C8 AO8 401 A 1 HETATM 10 C C4 AO8 . . . C 3 -24.915 -16.782 24.478 1 29.32 ? C4 AO8 401 A 1 HETATM 11 C C3 AO8 . . . C 3 -25.035 -16.788 23.067 1 28.01 ? C3 AO8 401 A 1 HETATM 12 C C2 AO8 . . . C 3 -25.928 -15.969 22.439 1 29.47 ? C2 AO8 401 A 1 HETATM 13 C C1 AO8 . . . C 3 -26.735 -15.107 23.168 1 29.52 ? C1 AO8 401 A 1 HETATM 14 N N1 AO8 . . . C 3 -27.948 -12.704 24.327 1 35.14 ? N1 AO8 401 A 1 HETATM 15 C C9 AO8 . . . C 3 -26.83 -11.863 23.87 1 36.32 ? C9 AO8 401 A 1 HETATM 16 C C10 AO8 . . . C 3 -26.688 -10.595 24.685 1 34.93 ? C10 AO8 401 A 1 HETATM 17 N N2 AO8 . . . C 3 -27.954 -9.86 24.728 1 33.67 ? N2 AO8 401 A 1 HETATM 18 C C11 AO8 . . . C 3 -28.227 -9.133 23.489 1 34.63 ? C11 AO8 401 A 1 HETATM 19 C C12 AO8 . . . C 3 -29.292 -8.073 23.644 1 34.11 ? C12 AO8 401 A 1 HETATM 20 C C17 AO8 . . . C 3 -29.033 -6.77 23.217 1 33.9 ? C17 AO8 401 A 1 HETATM 21 C C16 AO8 . . . C 3 -29.987 -5.778 23.346 1 34.4 ? C16 AO8 401 A 1 HETATM 22 C C15 AO8 . . . C 3 -31.208 -6.068 23.897 1 40.14 ? C15 AO8 401 A 1 HETATM 23 C C14 AO8 . . . C 3 -31.486 -7.354 24.326 1 44.05 ? C14 AO8 401 A 1 HETATM 24 C C13 AO8 . . . C 3 -30.544 -8.387 24.214 1 45.51 ? C13 AO8 401 A 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #