data_5OTS
#
_model_server_result.job_id            3ouNeqdnhvTudVW0yiPF4w 
_model_server_result.datetime_utc      '2024-11-23 00:26:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ots 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    5OTS 
#
_exptl.entry_id    5OTS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              397.32 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(1~{H}-benzimidazol-2-yl)ethyl-[[3,5-bis(chloranyl)-4-phenyl-phenyl]methyl]azanium 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.36 
_cell.angle_gamma         90 
_cell.entry_id            5OTS 
_cell.length_a            60.102 
_cell.length_b            45.692 
_cell.length_c            63.611 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OTS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C22 H20 Cl2 N3 1' 
_chem_comp.formula_weight    397.32 
_chem_comp.id                AU2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(1~{H}-benzimidazol-2-yl)ethyl-[[3,5-bis(chloranyl)-4-phenyl-phenyl]methyl]azanium 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C11 C10 AU2 doub 70 n y 
C11 C12 AU2 sing 71 n y 
C10 C9 AU2 sing 72 n y 
N2 C12 AU2 sing 73 n y 
N2 C6 AU2 doub 74 n y 
C12 C7 AU2 doub 75 n y 
C9 C8 AU2 doub 76 n y 
C6 C5 AU2 sing 77 n n 
C6 N1 AU2 sing 78 n y 
C7 C8 AU2 sing 79 n y 
C7 N1 AU2 sing 80 n y 
C5 C4 AU2 sing 81 n n 
C4 N AU2 sing 82 n n 
N C3 AU2 sing 83 n n 
CL1 C14 AU2 sing 84 n n 
C13 C14 AU2 doub 85 n y 
C13 C2 AU2 sing 86 n y 
C17 C18 AU2 doub 87 n y 
C17 C16 AU2 sing 88 n y 
C3 C2 AU2 sing 89 n n 
C14 C15 AU2 sing 90 n y 
C2 C1 AU2 doub 91 n y 
C18 C19 AU2 sing 92 n y 
C15 C AU2 doub 93 n y 
C15 C16 AU2 sing 94 n n 
C1 C AU2 sing 95 n y 
C CL AU2 sing 96 n n 
C16 C21 AU2 doub 97 n y 
C19 C20 AU2 doub 98 n y 
C21 C20 AU2 sing 99 n y 
C1 H1 AU2 sing 100 n n 
C3 H2 AU2 sing 101 n n 
C3 H3 AU2 sing 102 n n 
C4 H4 AU2 sing 103 n n 
C4 H5 AU2 sing 104 n n 
C5 H6 AU2 sing 105 n n 
C5 H7 AU2 sing 106 n n 
N1 H8 AU2 sing 107 n n 
C9 H10 AU2 sing 108 n n 
C8 H11 AU2 sing 109 n n 
C21 H12 AU2 sing 110 n n 
C20 H13 AU2 sing 111 n n 
C19 H14 AU2 sing 112 n n 
C18 H15 AU2 sing 113 n n 
C17 H16 AU2 sing 114 n n 
C13 H17 AU2 sing 115 n n 
N H18 AU2 sing 116 n n 
N H19 AU2 sing 117 n n 
C11 H20 AU2 sing 118 n n 
C10 H21 AU2 sing 119 n n 
#
_atom_sites.entry_id                     5OTS 
_atom_sites.fract_transf_matrix[1][1]    0.016638 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006507 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021886 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01688 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AU2 A 1 401 1 AU2 131 . 
C 2 AU2 A 1 402 2 AU2 131 . 
D 2 AU2 A 1 403 3 AU2 131 . 
E 3 HOH A 1 501 149 HOH HOH . 
E 3 HOH A 2 502 215 HOH HOH . 
E 3 HOH A 3 503 204 HOH HOH . 
E 3 HOH A 4 504 200 HOH HOH . 
E 3 HOH A 5 505 167 HOH HOH . 
E 3 HOH A 6 506 115 HOH HOH . 
E 3 HOH A 7 507 46 HOH HOH . 
E 3 HOH A 8 508 87 HOH HOH . 
E 3 HOH A 9 509 116 HOH HOH . 
E 3 HOH A 10 510 49 HOH HOH . 
E 3 HOH A 11 511 119 HOH HOH . 
E 3 HOH A 12 512 138 HOH HOH . 
E 3 HOH A 13 513 1 HOH HOH . 
E 3 HOH A 14 514 183 HOH HOH . 
E 3 HOH A 15 515 147 HOH HOH . 
E 3 HOH A 16 516 192 HOH HOH . 
E 3 HOH A 17 517 101 HOH HOH . 
E 3 HOH A 18 518 63 HOH HOH . 
E 3 HOH A 19 519 28 HOH HOH . 
E 3 HOH A 20 520 31 HOH HOH . 
E 3 HOH A 21 521 15 HOH HOH . 
E 3 HOH A 22 522 212 HOH HOH . 
E 3 HOH A 23 523 17 HOH HOH . 
E 3 HOH A 24 524 66 HOH HOH . 
E 3 HOH A 25 525 32 HOH HOH . 
E 3 HOH A 26 526 70 HOH HOH . 
E 3 HOH A 27 527 26 HOH HOH . 
E 3 HOH A 28 528 151 HOH HOH . 
E 3 HOH A 29 529 11 HOH HOH . 
E 3 HOH A 30 530 136 HOH HOH . 
E 3 HOH A 31 531 8 HOH HOH . 
E 3 HOH A 32 532 20 HOH HOH . 
E 3 HOH A 33 533 54 HOH HOH . 
E 3 HOH A 34 534 205 HOH HOH . 
E 3 HOH A 35 535 106 HOH HOH . 
E 3 HOH A 36 536 12 HOH HOH . 
E 3 HOH A 37 537 203 HOH HOH . 
E 3 HOH A 38 538 122 HOH HOH . 
E 3 HOH A 39 539 39 HOH HOH . 
E 3 HOH A 40 540 75 HOH HOH . 
E 3 HOH A 41 541 194 HOH HOH . 
E 3 HOH A 42 542 57 HOH HOH . 
E 3 HOH A 43 543 4 HOH HOH . 
E 3 HOH A 44 544 55 HOH HOH . 
E 3 HOH A 45 545 95 HOH HOH . 
E 3 HOH A 46 546 13 HOH HOH . 
E 3 HOH A 47 547 209 HOH HOH . 
E 3 HOH A 48 548 169 HOH HOH . 
E 3 HOH A 49 549 102 HOH HOH . 
E 3 HOH A 50 550 104 HOH HOH . 
E 3 HOH A 51 551 84 HOH HOH . 
E 3 HOH A 52 552 86 HOH HOH . 
E 3 HOH A 53 553 7 HOH HOH . 
E 3 HOH A 54 554 21 HOH HOH . 
E 3 HOH A 55 555 30 HOH HOH . 
E 3 HOH A 56 556 73 HOH HOH . 
E 3 HOH A 57 557 68 HOH HOH . 
E 3 HOH A 58 558 48 HOH HOH . 
E 3 HOH A 59 559 114 HOH HOH . 
E 3 HOH A 60 560 184 HOH HOH . 
E 3 HOH A 61 561 187 HOH HOH . 
E 3 HOH A 62 562 165 HOH HOH . 
E 3 HOH A 63 563 99 HOH HOH . 
E 3 HOH A 64 564 113 HOH HOH . 
E 3 HOH A 65 565 56 HOH HOH . 
E 3 HOH A 66 566 135 HOH HOH . 
E 3 HOH A 67 567 60 HOH HOH . 
E 3 HOH A 68 568 164 HOH HOH . 
E 3 HOH A 69 569 107 HOH HOH . 
E 3 HOH A 70 570 108 HOH HOH . 
E 3 HOH A 71 571 50 HOH HOH . 
E 3 HOH A 72 572 16 HOH HOH . 
E 3 HOH A 73 573 105 HOH HOH . 
E 3 HOH A 74 574 62 HOH HOH . 
E 3 HOH A 75 575 111 HOH HOH . 
E 3 HOH A 76 576 112 HOH HOH . 
E 3 HOH A 77 577 82 HOH HOH . 
E 3 HOH A 78 578 80 HOH HOH . 
E 3 HOH A 79 579 124 HOH HOH . 
E 3 HOH A 80 580 216 HOH HOH . 
E 3 HOH A 81 581 18 HOH HOH . 
E 3 HOH A 82 582 58 HOH HOH . 
E 3 HOH A 83 583 163 HOH HOH . 
E 3 HOH A 84 584 61 HOH HOH . 
E 3 HOH A 85 585 76 HOH HOH . 
E 3 HOH A 86 586 129 HOH HOH . 
E 3 HOH A 87 587 153 HOH HOH . 
E 3 HOH A 88 588 132 HOH HOH . 
E 3 HOH A 89 589 202 HOH HOH . 
E 3 HOH A 90 590 160 HOH HOH . 
E 3 HOH A 91 591 6 HOH HOH . 
E 3 HOH A 92 592 29 HOH HOH . 
E 3 HOH A 93 593 78 HOH HOH . 
E 3 HOH A 94 594 176 HOH HOH . 
E 3 HOH A 95 595 120 HOH HOH . 
E 3 HOH A 96 596 168 HOH HOH . 
E 3 HOH A 97 597 127 HOH HOH . 
E 3 HOH A 98 598 130 HOH HOH . 
E 3 HOH A 99 599 170 HOH HOH . 
E 3 HOH A 100 600 77 HOH HOH . 
E 3 HOH A 101 601 27 HOH HOH . 
E 3 HOH A 102 602 64 HOH HOH . 
E 3 HOH A 103 603 185 HOH HOH . 
E 3 HOH A 104 604 42 HOH HOH . 
E 3 HOH A 105 605 197 HOH HOH . 
E 3 HOH A 106 606 52 HOH HOH . 
E 3 HOH A 107 607 206 HOH HOH . 
E 3 HOH A 108 608 23 HOH HOH . 
E 3 HOH A 109 609 53 HOH HOH . 
E 3 HOH A 110 610 33 HOH HOH . 
E 3 HOH A 111 611 67 HOH HOH . 
E 3 HOH A 112 612 189 HOH HOH . 
E 3 HOH A 113 613 3 HOH HOH . 
E 3 HOH A 114 614 47 HOH HOH . 
E 3 HOH A 115 615 182 HOH HOH . 
E 3 HOH A 116 616 201 HOH HOH . 
E 3 HOH A 117 617 74 HOH HOH . 
E 3 HOH A 118 618 145 HOH HOH . 
E 3 HOH A 119 619 37 HOH HOH . 
E 3 HOH A 120 620 69 HOH HOH . 
E 3 HOH A 121 621 25 HOH HOH . 
E 3 HOH A 122 622 210 HOH HOH . 
E 3 HOH A 123 623 2 HOH HOH . 
E 3 HOH A 124 624 19 HOH HOH . 
E 3 HOH A 125 625 157 HOH HOH . 
E 3 HOH A 126 626 144 HOH HOH . 
E 3 HOH A 127 627 199 HOH HOH . 
E 3 HOH A 128 628 134 HOH HOH . 
E 3 HOH A 129 629 141 HOH HOH . 
E 3 HOH A 130 630 162 HOH HOH . 
E 3 HOH A 131 631 24 HOH HOH . 
E 3 HOH A 132 632 14 HOH HOH . 
E 3 HOH A 133 633 35 HOH HOH . 
E 3 HOH A 134 634 97 HOH HOH . 
E 3 HOH A 135 635 158 HOH HOH . 
E 3 HOH A 136 636 38 HOH HOH . 
E 3 HOH A 137 637 140 HOH HOH . 
E 3 HOH A 138 638 40 HOH HOH . 
E 3 HOH A 139 639 139 HOH HOH . 
E 3 HOH A 140 640 22 HOH HOH . 
E 3 HOH A 141 641 88 HOH HOH . 
E 3 HOH A 142 642 143 HOH HOH . 
E 3 HOH A 143 643 98 HOH HOH . 
E 3 HOH A 144 644 150 HOH HOH . 
E 3 HOH A 145 645 36 HOH HOH . 
E 3 HOH A 146 646 123 HOH HOH . 
E 3 HOH A 147 647 9 HOH HOH . 
E 3 HOH A 148 648 85 HOH HOH . 
E 3 HOH A 149 649 211 HOH HOH . 
E 3 HOH A 150 650 214 HOH HOH . 
E 3 HOH A 151 651 172 HOH HOH . 
E 3 HOH A 152 652 125 HOH HOH . 
E 3 HOH A 153 653 131 HOH HOH . 
E 3 HOH A 154 654 188 HOH HOH . 
E 3 HOH A 155 655 43 HOH HOH . 
E 3 HOH A 156 656 179 HOH HOH . 
E 3 HOH A 157 657 89 HOH HOH . 
E 3 HOH A 158 658 91 HOH HOH . 
E 3 HOH A 159 659 154 HOH HOH . 
E 3 HOH A 160 660 155 HOH HOH . 
E 3 HOH A 161 661 175 HOH HOH . 
E 3 HOH A 162 662 83 HOH HOH . 
E 3 HOH A 163 663 186 HOH HOH . 
E 3 HOH A 164 664 94 HOH HOH . 
E 3 HOH A 165 665 79 HOH HOH . 
E 3 HOH A 166 666 146 HOH HOH . 
E 3 HOH A 167 667 177 HOH HOH . 
E 3 HOH A 168 668 174 HOH HOH . 
E 3 HOH A 169 669 213 HOH HOH . 
E 3 HOH A 170 670 5 HOH HOH . 
E 3 HOH A 171 671 142 HOH HOH . 
E 3 HOH A 172 672 96 HOH HOH . 
E 3 HOH A 173 673 159 HOH HOH . 
E 3 HOH A 174 674 196 HOH HOH . 
E 3 HOH A 175 675 191 HOH HOH . 
E 3 HOH A 176 676 190 HOH HOH . 
E 3 HOH A 177 677 161 HOH HOH . 
E 3 HOH A 178 678 109 HOH HOH . 
E 3 HOH A 179 679 121 HOH HOH . 
E 3 HOH A 180 680 208 HOH HOH . 
E 3 HOH A 181 681 103 HOH HOH . 
E 3 HOH A 182 682 148 HOH HOH . 
E 3 HOH A 183 683 173 HOH HOH . 
E 3 HOH A 184 684 34 HOH HOH . 
E 3 HOH A 185 685 171 HOH HOH . 
E 3 HOH A 186 686 166 HOH HOH . 
E 3 HOH A 187 687 137 HOH HOH . 
E 3 HOH A 188 688 156 HOH HOH . 
E 3 HOH A 189 689 110 HOH HOH . 
E 3 HOH A 190 690 198 HOH HOH . 
E 3 HOH A 191 691 207 HOH HOH . 
E 3 HOH A 192 692 126 HOH HOH . 
E 3 HOH A 193 693 217 HOH HOH . 
E 3 HOH A 194 694 100 HOH HOH . 
E 3 HOH A 195 695 93 HOH HOH . 
E 3 HOH A 196 696 152 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 AU2 . . . D 2 -101.165 -201.081 291.14 1 54.98 ? C1 AU2 403 A 1 
HETATM 2 C C2 AU2 . . . D 2 -101.398 -199.912 290.427 1 55.56 ? C2 AU2 403 A 1 
HETATM 3 C C3 AU2 . . . D 2 -102.179 -198.781 291.049 1 53.36 ? C3 AU2 403 A 1 
HETATM 4 C C4 AU2 . . . D 2 -100.84 -196.819 291.61 1 47.63 ? C4 AU2 403 A 1 
HETATM 5 C C5 AU2 . . . D 2 -99.859 -196.321 292.655 1 43.65 ? C5 AU2 403 A 1 
HETATM 6 C C6 AU2 . . . D 2 -99.183 -195.064 292.228 1 41.96 ? C6 AU2 403 A 1 
HETATM 7 C C7 AU2 . . . D 2 -98.663 -192.924 292.151 1 37.99 ? C7 AU2 403 A 1 
HETATM 8 N N1 AU2 . . . D 2 -99.496 -193.854 292.75 1 39.87 ? N1 AU2 403 A 1 
HETATM 9 N N2 AU2 . . . D 2 -98.216 -195.001 291.33 1 40.52 ? N2 AU2 403 A 1 
HETATM 10 C C9 AU2 . . . D 2 -97.494 -190.92 291.602 1 37.62 ? C9 AU2 403 A 1 
HETATM 11 C C8 AU2 . . . D 2 -98.502 -191.553 292.32 1 36.87 ? C8 AU2 403 A 1 
HETATM 12 CL CL1 AU2 . . . D 2 -99.603 -200.682 286.954 1 62.48 ? CL1 AU2 403 A 1 
HETATM 13 C C14 AU2 . . . D 2 -100.127 -200.829 288.601 1 57.82 ? C14 AU2 403 A 1 
HETATM 14 C C15 AU2 . . . D 2 -99.835 -201.996 289.314 1 53.12 ? C15 AU2 403 A 1 
HETATM 15 C C16 AU2 . . . D 2 -98.872 -203.013 288.782 1 48.48 ? C16 AU2 403 A 1 
HETATM 16 C C21 AU2 . . . D 2 -99.24 -204.354 288.646 1 43.97 ? C21 AU2 403 A 1 
HETATM 17 C C20 AU2 . . . D 2 -98.352 -205.283 288.125 1 43.42 ? C20 AU2 403 A 1 
HETATM 18 C C19 AU2 . . . D 2 -97.093 -204.889 287.711 1 44.59 ? C19 AU2 403 A 1 
HETATM 19 C C18 AU2 . . . D 2 -96.718 -203.561 287.82 1 45.01 ? C18 AU2 403 A 1 
HETATM 20 C C17 AU2 . . . D 2 -97.593 -202.632 288.359 1 45.65 ? C17 AU2 403 A 1 
HETATM 21 C C AU2 . . . D 2 -100.409 -202.098 290.589 1 53.92 ? C AU2 403 A 1 
HETATM 22 CL CL AU2 . . . D 2 -100.254 -203.56 291.51 1 55.3 ? CL AU2 403 A 1 
HETATM 23 C C13 AU2 . . . D 2 -100.878 -199.802 289.142 1 56.71 ? C13 AU2 403 A 1 
HETATM 24 N N AU2 . . . D 2 -101.417 -198.081 292.082 1 50.67 ? N AU2 403 A 1 
HETATM 25 C C12 AU2 . . . D 2 -97.865 -193.654 291.271 1 36.2 ? C12 AU2 403 A 1 
HETATM 26 C C11 AU2 . . . D 2 -96.864 -193.009 290.545 1 34.29 ? C11 AU2 403 A 1 
HETATM 27 C C10 AU2 . . . D 2 -96.68 -191.644 290.724 1 36.88 ? C10 AU2 403 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           27 
#