data_5OU9 # _model_server_result.job_id 8V1PlPzL_Av4tGicD2MgKg _model_server_result.datetime_utc '2025-01-23 05:36:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ou9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":202}' # _entry.id 5OU9 # _exptl.entry_id 5OU9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OU9 _cell.length_a 59.72 _cell.length_b 59.72 _cell.length_c 319.72 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OU9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 28 1_555 A SG CYS 70 A CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf2 A SG CYS 112 A CYS 110 1_555 A SG CYS 152 A CYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf3 B SG CYS 30 B CYS 28 1_555 B SG CYS 70 B CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf4 B SG CYS 112 B CYS 110 1_555 B SG CYS 152 B CYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? covale ? covale1 A ND2 ASN 74 A ASN 72 1_555 F C1 NAG . A NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 B ND2 ASN 74 B ASN 72 1_555 I C1 NAG . B NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale3 C C PRO 8 C PRO 8 1_555 C N HYP 9 C HYP 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale4 C C HYP 9 C HYP 9 1_555 C N GLY 10 C GLY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale5 C C PRO 11 C PRO 11 1_555 C N HYP 12 C HYP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale6 C C HYP 12 C HYP 12 1_555 C N GLY 13 C GLY 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale7 C C PRO 14 C PRO 14 1_555 C N HYP 15 C HYP 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale8 C C HYP 15 C HYP 15 1_555 C N GLY 16 C GLY 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale9 D C PRO 8 D PRO 8 1_555 D N HYP 9 D HYP 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale10 D C HYP 9 D HYP 9 1_555 D N GLY 10 D GLY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale11 D C PRO 11 D PRO 11 1_555 D N HYP 12 D HYP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale12 D C HYP 12 D HYP 12 1_555 D N GLY 13 D GLY 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale13 D C PRO 14 D PRO 14 1_555 D N HYP 15 D HYP 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale14 D C HYP 15 D HYP 15 1_555 D N GLY 16 D GLY 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale15 E C PRO 8 E PRO 8 1_555 E N HYP 9 E HYP 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale16 E C HYP 9 E HYP 9 1_555 E N GLY 10 E GLY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale17 E C PRO 11 E PRO 11 1_555 E N HYP 12 E HYP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale18 E C HYP 12 E HYP 12 1_555 E N GLY 13 E GLY 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale19 E C PRO 14 E PRO 14 1_555 E N HYP 15 E HYP 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale20 E C HYP 15 E HYP 15 1_555 E N GLY 16 E GLY 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 285 n n O1 HO1 PG4 sing 286 n n C1 C2 PG4 sing 287 n n C1 H11 PG4 sing 288 n n C1 H12 PG4 sing 289 n n C2 O2 PG4 sing 290 n n C2 H21 PG4 sing 291 n n C2 H22 PG4 sing 292 n n O2 C3 PG4 sing 293 n n C3 C4 PG4 sing 294 n n C3 H31 PG4 sing 295 n n C3 H32 PG4 sing 296 n n C4 O3 PG4 sing 297 n n C4 H41 PG4 sing 298 n n C4 H42 PG4 sing 299 n n O3 C5 PG4 sing 300 n n C5 C6 PG4 sing 301 n n C5 H51 PG4 sing 302 n n C5 H52 PG4 sing 303 n n C6 O4 PG4 sing 304 n n C6 H61 PG4 sing 305 n n C6 H62 PG4 sing 306 n n O4 C7 PG4 sing 307 n n C7 C8 PG4 sing 308 n n C7 H71 PG4 sing 309 n n C7 H72 PG4 sing 310 n n C8 O5 PG4 sing 311 n n C8 H81 PG4 sing 312 n n C8 H82 PG4 sing 313 n n O5 HO5 PG4 sing 314 n n # _atom_sites.entry_id 5OU9 _atom_sites.fract_transf_matrix[1][1] 0.016745 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016745 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003128 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 NAG A 1 201 572 NAG NAG . G 4 PG4 A 1 202 601 PG4 PG4 . H 5 CL B 1 201 203 CL CL . I 3 NAG B 1 202 572 NAG NAG . J 4 PG4 B 1 203 601 PG4 PG4 . K 6 HOH A 1 301 7 HOH HOH . K 6 HOH A 2 302 36 HOH HOH . K 6 HOH A 3 303 39 HOH HOH . K 6 HOH A 4 304 27 HOH HOH . K 6 HOH A 5 305 16 HOH HOH . K 6 HOH A 6 306 37 HOH HOH . K 6 HOH A 7 307 4 HOH HOH . K 6 HOH A 8 308 19 HOH HOH . K 6 HOH A 9 309 38 HOH HOH . K 6 HOH A 10 310 13 HOH HOH . K 6 HOH A 11 311 1 HOH HOH . K 6 HOH A 12 312 10 HOH HOH . K 6 HOH A 13 313 31 HOH HOH . K 6 HOH A 14 314 35 HOH HOH . K 6 HOH A 15 315 24 HOH HOH . K 6 HOH A 16 316 20 HOH HOH . K 6 HOH A 17 317 12 HOH HOH . K 6 HOH A 18 318 6 HOH HOH . K 6 HOH A 19 319 11 HOH HOH . K 6 HOH A 20 320 5 HOH HOH . K 6 HOH A 21 321 25 HOH HOH . K 6 HOH A 22 322 15 HOH HOH . K 6 HOH A 23 323 26 HOH HOH . L 6 HOH B 1 301 23 HOH HOH . L 6 HOH B 2 302 40 HOH HOH . L 6 HOH B 3 303 30 HOH HOH . L 6 HOH B 4 304 18 HOH HOH . L 6 HOH B 5 305 41 HOH HOH . L 6 HOH B 6 306 22 HOH HOH . L 6 HOH B 7 307 17 HOH HOH . L 6 HOH B 8 308 9 HOH HOH . L 6 HOH B 9 309 33 HOH HOH . L 6 HOH B 10 310 2 HOH HOH . L 6 HOH B 11 311 8 HOH HOH . L 6 HOH B 12 312 28 HOH HOH . L 6 HOH B 13 313 29 HOH HOH . L 6 HOH B 14 314 32 HOH HOH . L 6 HOH B 15 315 34 HOH HOH . L 6 HOH B 16 316 3 HOH HOH . M 6 HOH D 1 101 14 HOH HOH . N 6 HOH E 1 101 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . G 4 -26.451 16.568 -17.064 1 83.76 ? O1 PG4 202 A 1 HETATM 2 C C1 PG4 . . . G 4 -25.695 17.244 -18.083 1 83.42 ? C1 PG4 202 A 1 HETATM 3 C C2 PG4 . . . G 4 -25.624 16.428 -19.375 1 80.84 ? C2 PG4 202 A 1 HETATM 4 O O2 PG4 . . . G 4 -24.276 16.365 -19.852 1 80.08 ? O2 PG4 202 A 1 HETATM 5 C C3 PG4 . . . G 4 -24.105 15.686 -21.103 1 79.7 ? C3 PG4 202 A 1 HETATM 6 C C4 PG4 . . . G 4 -22.972 16.344 -21.885 1 80.41 ? C4 PG4 202 A 1 HETATM 7 O O3 PG4 . . . G 4 -22.773 15.741 -23.165 1 82.44 ? O3 PG4 202 A 1 HETATM 8 C C5 PG4 . . . G 4 -21.939 16.5 -24.066 1 81.48 ? C5 PG4 202 A 1 HETATM 9 C C6 PG4 . . . G 4 -20.545 15.885 -24.165 1 81.34 ? C6 PG4 202 A 1 HETATM 10 O O4 PG4 . . . G 4 -19.595 16.703 -23.478 1 82.44 ? O4 PG4 202 A 1 HETATM 11 C C7 PG4 . . . G 4 -18.368 16.029 -23.164 1 84.05 ? C7 PG4 202 A 1 HETATM 12 C C8 PG4 . . . G 4 -18.353 15.655 -21.678 1 85.62 ? C8 PG4 202 A 1 HETATM 13 O O5 PG4 . . . G 4 -17.711 16.654 -20.858 1 87.62 ? O5 PG4 202 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #