data_5OWF # _model_server_result.job_id 7NHNC3G4KniN8zotHqkDFw _model_server_result.datetime_utc '2025-03-12 21:21:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5owf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":313}' # _entry.id 5OWF # _exptl.entry_id 5OWF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OWF _cell.length_a 36.972 _cell.length_b 58.73 _cell.length_c 115.312 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OWF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 59 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 59 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 66 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 66 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.028 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5OWF _atom_sites.fract_transf_matrix[1][1] 0.027047 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008672 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 1 EDO EDO . C 2 EDO A 1 302 2 EDO EDO . D 2 EDO A 1 303 3 EDO EDO . E 2 EDO A 1 304 4 EDO EDO . F 2 EDO A 1 305 5 EDO EDO . G 2 EDO A 1 306 6 EDO EDO . H 2 EDO A 1 307 7 EDO EDO . I 2 EDO A 1 308 8 EDO EDO . J 2 EDO A 1 309 9 EDO EDO . K 2 EDO A 1 310 10 EDO EDO . L 2 EDO A 1 311 11 EDO EDO . M 2 EDO A 1 312 12 EDO EDO . N 2 EDO A 1 313 13 EDO EDO . O 2 EDO A 1 314 14 EDO EDO . P 2 EDO A 1 315 15 EDO EDO . Q 2 EDO A 1 316 16 EDO EDO . R 2 EDO A 1 317 17 EDO EDO . S 2 EDO A 1 318 18 EDO EDO . T 3 PEG A 1 319 1 PEG PEG . U 4 GLN A 1 320 1 GLN GLN . V 5 GOL A 1 321 1 GOL GOL . W 5 GOL A 1 322 2 GOL GOL . X 6 HOH A 1 401 41 HOH HOH . X 6 HOH A 2 402 36 HOH HOH . X 6 HOH A 3 403 4 HOH HOH . X 6 HOH A 4 404 49 HOH HOH . X 6 HOH A 5 405 5 HOH HOH . X 6 HOH A 6 406 107 HOH HOH . X 6 HOH A 7 407 122 HOH HOH . X 6 HOH A 8 408 117 HOH HOH . X 6 HOH A 9 409 37 HOH HOH . X 6 HOH A 10 410 14 HOH HOH . X 6 HOH A 11 411 13 HOH HOH . X 6 HOH A 12 412 132 HOH HOH . X 6 HOH A 13 413 61 HOH HOH . X 6 HOH A 14 414 83 HOH HOH . X 6 HOH A 15 415 27 HOH HOH . X 6 HOH A 16 416 46 HOH HOH . X 6 HOH A 17 417 84 HOH HOH . X 6 HOH A 18 418 19 HOH HOH . X 6 HOH A 19 419 85 HOH HOH . X 6 HOH A 20 420 33 HOH HOH . X 6 HOH A 21 421 53 HOH HOH . X 6 HOH A 22 422 64 HOH HOH . X 6 HOH A 23 423 17 HOH HOH . X 6 HOH A 24 424 95 HOH HOH . X 6 HOH A 25 425 92 HOH HOH . X 6 HOH A 26 426 23 HOH HOH . X 6 HOH A 27 427 91 HOH HOH . X 6 HOH A 28 428 56 HOH HOH . X 6 HOH A 29 429 66 HOH HOH . X 6 HOH A 30 430 120 HOH HOH . X 6 HOH A 31 431 6 HOH HOH . X 6 HOH A 32 432 69 HOH HOH . X 6 HOH A 33 433 8 HOH HOH . X 6 HOH A 34 434 54 HOH HOH . X 6 HOH A 35 435 102 HOH HOH . X 6 HOH A 36 436 39 HOH HOH . X 6 HOH A 37 437 78 HOH HOH . X 6 HOH A 38 438 71 HOH HOH . X 6 HOH A 39 439 74 HOH HOH . X 6 HOH A 40 440 103 HOH HOH . X 6 HOH A 41 441 140 HOH HOH . X 6 HOH A 42 442 124 HOH HOH . X 6 HOH A 43 443 130 HOH HOH . X 6 HOH A 44 444 114 HOH HOH . X 6 HOH A 45 445 10 HOH HOH . X 6 HOH A 46 446 57 HOH HOH . X 6 HOH A 47 447 65 HOH HOH . X 6 HOH A 48 448 1 HOH HOH . X 6 HOH A 49 449 24 HOH HOH . X 6 HOH A 50 450 116 HOH HOH . X 6 HOH A 51 451 34 HOH HOH . X 6 HOH A 52 452 28 HOH HOH . X 6 HOH A 53 453 44 HOH HOH . X 6 HOH A 54 454 62 HOH HOH . X 6 HOH A 55 455 47 HOH HOH . X 6 HOH A 56 456 110 HOH HOH . X 6 HOH A 57 457 22 HOH HOH . X 6 HOH A 58 458 52 HOH HOH . X 6 HOH A 59 459 82 HOH HOH . X 6 HOH A 60 460 58 HOH HOH . X 6 HOH A 61 461 90 HOH HOH . X 6 HOH A 62 462 142 HOH HOH . X 6 HOH A 63 463 80 HOH HOH . X 6 HOH A 64 464 35 HOH HOH . X 6 HOH A 65 465 38 HOH HOH . X 6 HOH A 66 466 32 HOH HOH . X 6 HOH A 67 467 77 HOH HOH . X 6 HOH A 68 468 100 HOH HOH . X 6 HOH A 69 469 51 HOH HOH . X 6 HOH A 70 470 118 HOH HOH . X 6 HOH A 71 471 111 HOH HOH . X 6 HOH A 72 472 29 HOH HOH . X 6 HOH A 73 473 126 HOH HOH . X 6 HOH A 74 474 119 HOH HOH . X 6 HOH A 75 475 139 HOH HOH . X 6 HOH A 76 476 99 HOH HOH . X 6 HOH A 77 477 98 HOH HOH . X 6 HOH A 78 478 67 HOH HOH . X 6 HOH A 79 479 48 HOH HOH . X 6 HOH A 80 480 55 HOH HOH . X 6 HOH A 81 481 43 HOH HOH . X 6 HOH A 82 482 104 HOH HOH . X 6 HOH A 83 483 97 HOH HOH . X 6 HOH A 84 484 59 HOH HOH . X 6 HOH A 85 485 68 HOH HOH . X 6 HOH A 86 486 9 HOH HOH . X 6 HOH A 87 487 3 HOH HOH . X 6 HOH A 88 488 79 HOH HOH . X 6 HOH A 89 489 25 HOH HOH . X 6 HOH A 90 490 15 HOH HOH . X 6 HOH A 91 491 73 HOH HOH . X 6 HOH A 92 492 12 HOH HOH . X 6 HOH A 93 493 7 HOH HOH . X 6 HOH A 94 494 63 HOH HOH . X 6 HOH A 95 495 141 HOH HOH . X 6 HOH A 96 496 20 HOH HOH . X 6 HOH A 97 497 86 HOH HOH . X 6 HOH A 98 498 128 HOH HOH . X 6 HOH A 99 499 121 HOH HOH . X 6 HOH A 100 500 72 HOH HOH . X 6 HOH A 101 501 105 HOH HOH . X 6 HOH A 102 502 40 HOH HOH . X 6 HOH A 103 503 133 HOH HOH . X 6 HOH A 104 504 109 HOH HOH . X 6 HOH A 105 505 26 HOH HOH . X 6 HOH A 106 506 101 HOH HOH . X 6 HOH A 107 507 96 HOH HOH . X 6 HOH A 108 508 60 HOH HOH . X 6 HOH A 109 509 94 HOH HOH . X 6 HOH A 110 510 45 HOH HOH . X 6 HOH A 111 511 106 HOH HOH . X 6 HOH A 112 512 115 HOH HOH . X 6 HOH A 113 513 2 HOH HOH . X 6 HOH A 114 514 135 HOH HOH . X 6 HOH A 115 515 125 HOH HOH . X 6 HOH A 116 516 136 HOH HOH . X 6 HOH A 117 517 138 HOH HOH . X 6 HOH A 118 518 112 HOH HOH . X 6 HOH A 119 519 108 HOH HOH . X 6 HOH A 120 520 16 HOH HOH . X 6 HOH A 121 521 18 HOH HOH . X 6 HOH A 122 522 131 HOH HOH . X 6 HOH A 123 523 50 HOH HOH . X 6 HOH A 124 524 70 HOH HOH . X 6 HOH A 125 525 93 HOH HOH . X 6 HOH A 126 526 31 HOH HOH . X 6 HOH A 127 527 76 HOH HOH . X 6 HOH A 128 528 88 HOH HOH . X 6 HOH A 129 529 113 HOH HOH . X 6 HOH A 130 530 123 HOH HOH . X 6 HOH A 131 531 87 HOH HOH . X 6 HOH A 132 532 145 HOH HOH . X 6 HOH A 133 533 30 HOH HOH . X 6 HOH A 134 534 144 HOH HOH . X 6 HOH A 135 535 137 HOH HOH . X 6 HOH A 136 536 134 HOH HOH . X 6 HOH A 137 537 81 HOH HOH . X 6 HOH A 138 538 89 HOH HOH . X 6 HOH A 139 539 75 HOH HOH . X 6 HOH A 140 540 129 HOH HOH . X 6 HOH A 141 541 21 HOH HOH . X 6 HOH A 142 542 143 HOH HOH . X 6 HOH A 143 543 127 HOH HOH . X 6 HOH A 144 544 11 HOH HOH . X 6 HOH A 145 545 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . N 2 7.952 40.684 47.088 1 56.97 ? C1 EDO 313 A 1 HETATM 2 O O1 EDO . . . N 2 8.017 39.498 46.285 1 61.23 ? O1 EDO 313 A 1 HETATM 3 C C2 EDO . . . N 2 8.128 41.913 46.204 1 50.73 ? C2 EDO 313 A 1 HETATM 4 O O2 EDO . . . N 2 9.459 41.934 45.676 1 50.35 ? O2 EDO 313 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #