data_5OWH # _model_server_result.job_id KPPHUzEKFskfvVAZ0pKSqw _model_server_result.datetime_utc '2024-11-22 04:11:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5owh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5OWH # _exptl.entry_id 5OWH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 490.815 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]propan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OWH _cell.length_a 71.661 _cell.length_b 71.661 _cell.length_c 133.107 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OWH _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H9 Br4 N3' _chem_comp.formula_weight 490.815 _chem_comp.id B0K _chem_comp.mon_nstd_flag . _chem_comp.name 3-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]propan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR3 C6 B0K sing 70 n n BR4 C1 B0K sing 71 n n C6 C1 B0K doub 72 n y C6 C5 B0K sing 73 n y C1 C2 B0K sing 74 n y BR2 C5 B0K sing 75 n n C5 C4 B0K doub 76 n y C2 N9 B0K sing 77 n y C2 C3 B0K doub 78 n y N9 C8 B0K doub 79 n y C4 C3 B0K sing 80 n y C4 BR1 B0K sing 81 n n C3 N7 B0K sing 82 n y C8 N7 B0K sing 83 n y N7 C14 B0K sing 84 n n C14 C15 B0K sing 85 n n C15 C16 B0K sing 86 n n C16 N17 B0K sing 87 n n C14 H1 B0K sing 88 n n C14 H2 B0K sing 89 n n C16 H3 B0K sing 90 n n C16 H4 B0K sing 91 n n C15 H5 B0K sing 92 n n C15 H6 B0K sing 93 n n C8 H7 B0K sing 94 n n N17 H8 B0K sing 95 n n N17 H9 B0K sing 96 n n # _atom_sites.entry_id 5OWH _atom_sites.fract_transf_matrix[1][1] 0.013955 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013955 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007513 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B0K A 1 401 1 B0K PDB . C 3 CL A 1 402 1 CL CL . D 4 HOH A 1 501 47 HOH HOH . D 4 HOH A 2 502 21 HOH HOH . D 4 HOH A 3 503 4 HOH HOH . D 4 HOH A 4 504 33 HOH HOH . D 4 HOH A 5 505 32 HOH HOH . D 4 HOH A 6 506 24 HOH HOH . D 4 HOH A 7 507 16 HOH HOH . D 4 HOH A 8 508 7 HOH HOH . D 4 HOH A 9 509 26 HOH HOH . D 4 HOH A 10 510 37 HOH HOH . D 4 HOH A 11 511 20 HOH HOH . D 4 HOH A 12 512 38 HOH HOH . D 4 HOH A 13 513 41 HOH HOH . D 4 HOH A 14 514 13 HOH HOH . D 4 HOH A 15 515 1 HOH HOH . D 4 HOH A 16 516 35 HOH HOH . D 4 HOH A 17 517 15 HOH HOH . D 4 HOH A 18 518 19 HOH HOH . D 4 HOH A 19 519 39 HOH HOH . D 4 HOH A 20 520 8 HOH HOH . D 4 HOH A 21 521 12 HOH HOH . D 4 HOH A 22 522 2 HOH HOH . D 4 HOH A 23 523 31 HOH HOH . D 4 HOH A 24 524 3 HOH HOH . D 4 HOH A 25 525 11 HOH HOH . D 4 HOH A 26 526 9 HOH HOH . D 4 HOH A 27 527 17 HOH HOH . D 4 HOH A 28 528 36 HOH HOH . D 4 HOH A 29 529 40 HOH HOH . D 4 HOH A 30 530 5 HOH HOH . D 4 HOH A 31 531 10 HOH HOH . D 4 HOH A 32 532 6 HOH HOH . D 4 HOH A 33 533 14 HOH HOH . D 4 HOH A 34 534 30 HOH HOH . D 4 HOH A 35 535 22 HOH HOH . D 4 HOH A 36 536 46 HOH HOH . D 4 HOH A 37 537 25 HOH HOH . D 4 HOH A 38 538 28 HOH HOH . D 4 HOH A 39 539 23 HOH HOH . D 4 HOH A 40 540 44 HOH HOH . D 4 HOH A 41 541 29 HOH HOH . D 4 HOH A 42 542 45 HOH HOH . D 4 HOH A 43 543 48 HOH HOH . D 4 HOH A 44 544 18 HOH HOH . D 4 HOH A 45 545 27 HOH HOH . D 4 HOH A 46 546 43 HOH HOH . D 4 HOH A 47 547 34 HOH HOH . D 4 HOH A 48 548 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 B0K . . . B 2 19.421 -2.341 18.817 0.78 69.83 ? C2 B0K 401 A 1 HETATM 2 C C3 B0K . . . B 2 18.838 -3.095 19.805 0.78 65.98 ? C3 B0K 401 A 1 HETATM 3 C C4 B0K . . . B 2 17.912 -4.117 19.452 0.78 71.82 ? C4 B0K 401 A 1 HETATM 4 C C5 B0K . . . B 2 17.601 -4.346 18.114 0.78 79.66 ? C5 B0K 401 A 1 HETATM 5 C C6 B0K . . . B 2 18.197 -3.575 17.116 0.78 98.26 ? C6 B0K 401 A 1 HETATM 6 N N9 B0K . . . B 2 20.254 -1.445 19.411 0.78 67.56 ? N9 B0K 401 A 1 HETATM 7 C C14 B0K . . . B 2 19.04 -3.1 22.318 0.78 50.07 ? C14 B0K 401 A 1 HETATM 8 C C16 B0K . . . B 2 20.164 -1.581 24.01 0.78 50.59 ? C16 B0K 401 A 1 HETATM 9 C C1 B0K . . . B 2 19.101 -2.576 17.457 0.78 93.74 ? C1 B0K 401 A 1 HETATM 10 C C15 B0K . . . B 2 18.877 -1.899 23.251 0.78 55.97 ? C15 B0K 401 A 1 HETATM 11 C C8 B0K . . . B 2 20.188 -1.642 20.714 0.78 68.11 ? C8 B0K 401 A 1 HETATM 12 N N17 B0K . . . B 2 19.935 -0.571 25.026 0.78 34.56 ? N17 B0K 401 A 1 HETATM 13 N N7 B0K . . . B 2 19.345 -2.627 20.981 0.78 62.23 ? N7 B0K 401 A 1 HETATM 14 BR BR1 B0K . . . B 2 17.068 -5.208 20.815 0.78 75.36 ? BR1 B0K 401 A 1 HETATM 15 BR BR2 B0K . . . B 2 16.34 -5.74 17.632 0.78 77.99 ? BR2 B0K 401 A 1 HETATM 16 BR BR3 B0K . . . B 2 17.765 -3.895 15.253 0.78 121.96 ? BR3 B0K 401 A 1 HETATM 17 BR BR4 B0K . . . B 2 19.935 -1.496 16.079 0.78 113.31 ? BR4 B0K 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 792 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #