data_5OWL # _model_server_result.job_id 7kbw6snX2gS_U9-COcOd2A _model_server_result.datetime_utc '2024-12-26 23:07:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5owl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 5OWL # _exptl.entry_id 5OWL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 490.815 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]propan-1-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OWL _cell.length_a 126.364 _cell.length_b 126.364 _cell.length_c 125.271 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OWL _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,K 1 1 B,F,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C10 H9 Br4 N3' _chem_comp.formula_weight 490.815 _chem_comp.id B0K _chem_comp.mon_nstd_flag . _chem_comp.name 3-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]propan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR3 C6 B0K sing 70 n n BR4 C1 B0K sing 71 n n C6 C1 B0K doub 72 n y C6 C5 B0K sing 73 n y C1 C2 B0K sing 74 n y BR2 C5 B0K sing 75 n n C5 C4 B0K doub 76 n y C2 N9 B0K sing 77 n y C2 C3 B0K doub 78 n y N9 C8 B0K doub 79 n y C4 C3 B0K sing 80 n y C4 BR1 B0K sing 81 n n C3 N7 B0K sing 82 n y C8 N7 B0K sing 83 n y N7 C14 B0K sing 84 n n C14 C15 B0K sing 85 n n C15 C16 B0K sing 86 n n C16 N17 B0K sing 87 n n C14 H1 B0K sing 88 n n C14 H2 B0K sing 89 n n C16 H3 B0K sing 90 n n C16 H4 B0K sing 91 n n C15 H5 B0K sing 92 n n C15 H6 B0K sing 93 n n C8 H7 B0K sing 94 n n N17 H8 B0K sing 95 n n N17 H9 B0K sing 96 n n # _atom_sites.entry_id 5OWL _atom_sites.fract_transf_matrix[1][1] 0.007914 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007914 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007983 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B0K A 1 401 1 B0K PDB . D 3 SO4 A 1 402 4 SO4 SO4 . E 3 SO4 A 1 403 6 SO4 SO4 . F 2 B0K B 1 401 2 B0K PDB . G 3 SO4 B 1 402 3 SO4 SO4 . H 3 SO4 B 1 403 5 SO4 SO4 . I 3 SO4 B 1 404 7 SO4 SO4 . J 4 GOL B 1 405 8 GOL GOL . K 5 HOH A 1 501 1 HOH HOH . K 5 HOH A 2 502 56 HOH HOH . K 5 HOH A 3 503 103 HOH HOH . K 5 HOH A 4 504 20 HOH HOH . K 5 HOH A 5 505 23 HOH HOH . K 5 HOH A 6 506 81 HOH HOH . K 5 HOH A 7 507 69 HOH HOH . K 5 HOH A 8 508 30 HOH HOH . K 5 HOH A 9 509 100 HOH HOH . K 5 HOH A 10 510 32 HOH HOH . K 5 HOH A 11 511 49 HOH HOH . K 5 HOH A 12 512 41 HOH HOH . K 5 HOH A 13 513 59 HOH HOH . K 5 HOH A 14 514 29 HOH HOH . K 5 HOH A 15 515 5 HOH HOH . K 5 HOH A 16 516 40 HOH HOH . K 5 HOH A 17 517 35 HOH HOH . K 5 HOH A 18 518 105 HOH HOH . K 5 HOH A 19 519 50 HOH HOH . K 5 HOH A 20 520 72 HOH HOH . K 5 HOH A 21 521 101 HOH HOH . K 5 HOH A 22 522 65 HOH HOH . K 5 HOH A 23 523 70 HOH HOH . K 5 HOH A 24 524 108 HOH HOH . K 5 HOH A 25 525 79 HOH HOH . K 5 HOH A 26 526 75 HOH HOH . K 5 HOH A 27 527 12 HOH HOH . K 5 HOH A 28 528 21 HOH HOH . K 5 HOH A 29 529 24 HOH HOH . K 5 HOH A 30 530 9 HOH HOH . K 5 HOH A 31 531 43 HOH HOH . K 5 HOH A 32 532 53 HOH HOH . K 5 HOH A 33 533 104 HOH HOH . K 5 HOH A 34 534 111 HOH HOH . K 5 HOH A 35 535 39 HOH HOH . K 5 HOH A 36 536 113 HOH HOH . K 5 HOH A 37 537 106 HOH HOH . K 5 HOH A 38 538 57 HOH HOH . K 5 HOH A 39 539 71 HOH HOH . K 5 HOH A 40 540 2 HOH HOH . K 5 HOH A 41 541 86 HOH HOH . K 5 HOH A 42 542 87 HOH HOH . K 5 HOH A 43 543 99 HOH HOH . K 5 HOH A 44 544 19 HOH HOH . K 5 HOH A 45 545 74 HOH HOH . K 5 HOH A 46 546 122 HOH HOH . K 5 HOH A 47 547 6 HOH HOH . K 5 HOH A 48 548 36 HOH HOH . K 5 HOH A 49 549 55 HOH HOH . K 5 HOH A 50 550 17 HOH HOH . K 5 HOH A 51 551 33 HOH HOH . K 5 HOH A 52 552 107 HOH HOH . K 5 HOH A 53 553 60 HOH HOH . K 5 HOH A 54 554 118 HOH HOH . K 5 HOH A 55 555 63 HOH HOH . K 5 HOH A 56 556 93 HOH HOH . K 5 HOH A 57 557 88 HOH HOH . K 5 HOH A 58 558 44 HOH HOH . K 5 HOH A 59 559 64 HOH HOH . K 5 HOH A 60 560 42 HOH HOH . K 5 HOH A 61 561 96 HOH HOH . K 5 HOH A 62 562 121 HOH HOH . K 5 HOH A 63 563 125 HOH HOH . K 5 HOH A 64 564 73 HOH HOH . K 5 HOH A 65 565 109 HOH HOH . K 5 HOH A 66 566 67 HOH HOH . K 5 HOH A 67 567 120 HOH HOH . L 5 HOH B 1 501 115 HOH HOH . L 5 HOH B 2 502 51 HOH HOH . L 5 HOH B 3 503 13 HOH HOH . L 5 HOH B 4 504 82 HOH HOH . L 5 HOH B 5 505 61 HOH HOH . L 5 HOH B 6 506 47 HOH HOH . L 5 HOH B 7 507 66 HOH HOH . L 5 HOH B 8 508 45 HOH HOH . L 5 HOH B 9 509 3 HOH HOH . L 5 HOH B 10 510 52 HOH HOH . L 5 HOH B 11 511 78 HOH HOH . L 5 HOH B 12 512 11 HOH HOH . L 5 HOH B 13 513 77 HOH HOH . L 5 HOH B 14 514 46 HOH HOH . L 5 HOH B 15 515 85 HOH HOH . L 5 HOH B 16 516 38 HOH HOH . L 5 HOH B 17 517 92 HOH HOH . L 5 HOH B 18 518 18 HOH HOH . L 5 HOH B 19 519 84 HOH HOH . L 5 HOH B 20 520 22 HOH HOH . L 5 HOH B 21 521 4 HOH HOH . L 5 HOH B 22 522 48 HOH HOH . L 5 HOH B 23 523 102 HOH HOH . L 5 HOH B 24 524 28 HOH HOH . L 5 HOH B 25 525 68 HOH HOH . L 5 HOH B 26 526 91 HOH HOH . L 5 HOH B 27 527 31 HOH HOH . L 5 HOH B 28 528 27 HOH HOH . L 5 HOH B 29 529 7 HOH HOH . L 5 HOH B 30 530 123 HOH HOH . L 5 HOH B 31 531 8 HOH HOH . L 5 HOH B 32 532 25 HOH HOH . L 5 HOH B 33 533 16 HOH HOH . L 5 HOH B 34 534 117 HOH HOH . L 5 HOH B 35 535 110 HOH HOH . L 5 HOH B 36 536 76 HOH HOH . L 5 HOH B 37 537 98 HOH HOH . L 5 HOH B 38 538 14 HOH HOH . L 5 HOH B 39 539 90 HOH HOH . L 5 HOH B 40 540 37 HOH HOH . L 5 HOH B 41 541 80 HOH HOH . L 5 HOH B 42 542 10 HOH HOH . L 5 HOH B 43 543 26 HOH HOH . L 5 HOH B 44 544 89 HOH HOH . L 5 HOH B 45 545 119 HOH HOH . L 5 HOH B 46 546 94 HOH HOH . L 5 HOH B 47 547 62 HOH HOH . L 5 HOH B 48 548 124 HOH HOH . L 5 HOH B 49 549 15 HOH HOH . L 5 HOH B 50 550 83 HOH HOH . L 5 HOH B 51 551 112 HOH HOH . L 5 HOH B 52 552 58 HOH HOH . L 5 HOH B 53 553 54 HOH HOH . L 5 HOH B 54 554 97 HOH HOH . L 5 HOH B 55 555 116 HOH HOH . L 5 HOH B 56 556 95 HOH HOH . L 5 HOH B 57 557 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 B0K . . . F 2 -18.649 -66.915 34.14 1 108.15 ? C2 B0K 401 B 1 HETATM 2 C C3 B0K . . . F 2 -18.39 -66.792 35.484 1 109.23 ? C3 B0K 401 B 1 HETATM 3 C C4 B0K . . . F 2 -19.222 -67.482 36.415 1 122.48 ? C4 B0K 401 B 1 HETATM 4 C C5 B0K . . . F 2 -20.28 -68.268 35.97 1 99.23 ? C5 B0K 401 B 1 HETATM 5 C C6 B0K . . . F 2 -20.538 -68.388 34.601 1 103.47 ? C6 B0K 401 B 1 HETATM 6 N N9 B0K . . . F 2 -17.727 -66.17 33.471 1 103.38 ? N9 B0K 401 B 1 HETATM 7 C C14 B0K . . . F 2 -16.628 -65.526 36.802 1 90.03 ? C14 B0K 401 B 1 HETATM 8 C C16 B0K . . . F 2 -16.919 -64.544 39.117 1 48.39 ? C16 B0K 401 B 1 HETATM 9 C C1 B0K . . . F 2 -19.731 -67.718 33.683 1 122.69 ? C1 B0K 401 B 1 HETATM 10 C C15 B0K . . . F 2 -17.461 -64.6 37.688 1 74.78 ? C15 B0K 401 B 1 HETATM 11 C C8 B0K . . . F 2 -16.933 -65.612 34.366 1 105.9 ? C8 B0K 401 B 1 HETATM 12 N N17 B0K . . . F 2 -17.935 -64.944 40.076 1 35.02 ? N17 B0K 401 B 1 HETATM 13 N N7 B0K . . . F 2 -17.306 -65.96 35.587 1 102.88 ? N7 B0K 401 B 1 HETATM 14 BR BR1 B0K . . . F 2 -18.926 -67.366 38.329 1 162.08 ? BR1 B0K 401 B 1 HETATM 15 BR BR2 B0K . . . F 2 -21.391 -69.188 37.277 1 77.84 ? BR2 B0K 401 B 1 HETATM 16 BR BR3 B0K . . . F 2 -22.019 -69.492 33.994 1 91.64 ? BR3 B0K 401 B 1 HETATM 17 BR BR4 B0K . . . F 2 -20.067 -67.867 31.773 1 155.44 ? BR4 B0K 401 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 17 #