data_5OWL
#
_model_server_result.job_id            Sxw-V8bGqODrcvIE3A9L9A 
_model_server_result.datetime_utc      '2024-12-26 22:23:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5owl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":405}' 
#
_entry.id    5OWL 
#
_exptl.entry_id    5OWL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5OWL 
_cell.length_a            126.364 
_cell.length_b            126.364 
_cell.length_c            125.271 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OWL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,K 1 1 
B,F,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 156 n n 
C1 C2 GOL sing 157 n n 
C1 H11 GOL sing 158 n n 
C1 H12 GOL sing 159 n n 
O1 HO1 GOL sing 160 n n 
C2 O2 GOL sing 161 n n 
C2 C3 GOL sing 162 n n 
C2 H2 GOL sing 163 n n 
O2 HO2 GOL sing 164 n n 
C3 O3 GOL sing 165 n n 
C3 H31 GOL sing 166 n n 
C3 H32 GOL sing 167 n n 
O3 HO3 GOL sing 168 n n 
#
_atom_sites.entry_id                     5OWL 
_atom_sites.fract_transf_matrix[1][1]    0.007914 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007914 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007983 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 B0K A 1 401 1 B0K PDB . 
D 3 SO4 A 1 402 4 SO4 SO4 . 
E 3 SO4 A 1 403 6 SO4 SO4 . 
F 2 B0K B 1 401 2 B0K PDB . 
G 3 SO4 B 1 402 3 SO4 SO4 . 
H 3 SO4 B 1 403 5 SO4 SO4 . 
I 3 SO4 B 1 404 7 SO4 SO4 . 
J 4 GOL B 1 405 8 GOL GOL . 
K 5 HOH A 1 501 1 HOH HOH . 
K 5 HOH A 2 502 56 HOH HOH . 
K 5 HOH A 3 503 103 HOH HOH . 
K 5 HOH A 4 504 20 HOH HOH . 
K 5 HOH A 5 505 23 HOH HOH . 
K 5 HOH A 6 506 81 HOH HOH . 
K 5 HOH A 7 507 69 HOH HOH . 
K 5 HOH A 8 508 30 HOH HOH . 
K 5 HOH A 9 509 100 HOH HOH . 
K 5 HOH A 10 510 32 HOH HOH . 
K 5 HOH A 11 511 49 HOH HOH . 
K 5 HOH A 12 512 41 HOH HOH . 
K 5 HOH A 13 513 59 HOH HOH . 
K 5 HOH A 14 514 29 HOH HOH . 
K 5 HOH A 15 515 5 HOH HOH . 
K 5 HOH A 16 516 40 HOH HOH . 
K 5 HOH A 17 517 35 HOH HOH . 
K 5 HOH A 18 518 105 HOH HOH . 
K 5 HOH A 19 519 50 HOH HOH . 
K 5 HOH A 20 520 72 HOH HOH . 
K 5 HOH A 21 521 101 HOH HOH . 
K 5 HOH A 22 522 65 HOH HOH . 
K 5 HOH A 23 523 70 HOH HOH . 
K 5 HOH A 24 524 108 HOH HOH . 
K 5 HOH A 25 525 79 HOH HOH . 
K 5 HOH A 26 526 75 HOH HOH . 
K 5 HOH A 27 527 12 HOH HOH . 
K 5 HOH A 28 528 21 HOH HOH . 
K 5 HOH A 29 529 24 HOH HOH . 
K 5 HOH A 30 530 9 HOH HOH . 
K 5 HOH A 31 531 43 HOH HOH . 
K 5 HOH A 32 532 53 HOH HOH . 
K 5 HOH A 33 533 104 HOH HOH . 
K 5 HOH A 34 534 111 HOH HOH . 
K 5 HOH A 35 535 39 HOH HOH . 
K 5 HOH A 36 536 113 HOH HOH . 
K 5 HOH A 37 537 106 HOH HOH . 
K 5 HOH A 38 538 57 HOH HOH . 
K 5 HOH A 39 539 71 HOH HOH . 
K 5 HOH A 40 540 2 HOH HOH . 
K 5 HOH A 41 541 86 HOH HOH . 
K 5 HOH A 42 542 87 HOH HOH . 
K 5 HOH A 43 543 99 HOH HOH . 
K 5 HOH A 44 544 19 HOH HOH . 
K 5 HOH A 45 545 74 HOH HOH . 
K 5 HOH A 46 546 122 HOH HOH . 
K 5 HOH A 47 547 6 HOH HOH . 
K 5 HOH A 48 548 36 HOH HOH . 
K 5 HOH A 49 549 55 HOH HOH . 
K 5 HOH A 50 550 17 HOH HOH . 
K 5 HOH A 51 551 33 HOH HOH . 
K 5 HOH A 52 552 107 HOH HOH . 
K 5 HOH A 53 553 60 HOH HOH . 
K 5 HOH A 54 554 118 HOH HOH . 
K 5 HOH A 55 555 63 HOH HOH . 
K 5 HOH A 56 556 93 HOH HOH . 
K 5 HOH A 57 557 88 HOH HOH . 
K 5 HOH A 58 558 44 HOH HOH . 
K 5 HOH A 59 559 64 HOH HOH . 
K 5 HOH A 60 560 42 HOH HOH . 
K 5 HOH A 61 561 96 HOH HOH . 
K 5 HOH A 62 562 121 HOH HOH . 
K 5 HOH A 63 563 125 HOH HOH . 
K 5 HOH A 64 564 73 HOH HOH . 
K 5 HOH A 65 565 109 HOH HOH . 
K 5 HOH A 66 566 67 HOH HOH . 
K 5 HOH A 67 567 120 HOH HOH . 
L 5 HOH B 1 501 115 HOH HOH . 
L 5 HOH B 2 502 51 HOH HOH . 
L 5 HOH B 3 503 13 HOH HOH . 
L 5 HOH B 4 504 82 HOH HOH . 
L 5 HOH B 5 505 61 HOH HOH . 
L 5 HOH B 6 506 47 HOH HOH . 
L 5 HOH B 7 507 66 HOH HOH . 
L 5 HOH B 8 508 45 HOH HOH . 
L 5 HOH B 9 509 3 HOH HOH . 
L 5 HOH B 10 510 52 HOH HOH . 
L 5 HOH B 11 511 78 HOH HOH . 
L 5 HOH B 12 512 11 HOH HOH . 
L 5 HOH B 13 513 77 HOH HOH . 
L 5 HOH B 14 514 46 HOH HOH . 
L 5 HOH B 15 515 85 HOH HOH . 
L 5 HOH B 16 516 38 HOH HOH . 
L 5 HOH B 17 517 92 HOH HOH . 
L 5 HOH B 18 518 18 HOH HOH . 
L 5 HOH B 19 519 84 HOH HOH . 
L 5 HOH B 20 520 22 HOH HOH . 
L 5 HOH B 21 521 4 HOH HOH . 
L 5 HOH B 22 522 48 HOH HOH . 
L 5 HOH B 23 523 102 HOH HOH . 
L 5 HOH B 24 524 28 HOH HOH . 
L 5 HOH B 25 525 68 HOH HOH . 
L 5 HOH B 26 526 91 HOH HOH . 
L 5 HOH B 27 527 31 HOH HOH . 
L 5 HOH B 28 528 27 HOH HOH . 
L 5 HOH B 29 529 7 HOH HOH . 
L 5 HOH B 30 530 123 HOH HOH . 
L 5 HOH B 31 531 8 HOH HOH . 
L 5 HOH B 32 532 25 HOH HOH . 
L 5 HOH B 33 533 16 HOH HOH . 
L 5 HOH B 34 534 117 HOH HOH . 
L 5 HOH B 35 535 110 HOH HOH . 
L 5 HOH B 36 536 76 HOH HOH . 
L 5 HOH B 37 537 98 HOH HOH . 
L 5 HOH B 38 538 14 HOH HOH . 
L 5 HOH B 39 539 90 HOH HOH . 
L 5 HOH B 40 540 37 HOH HOH . 
L 5 HOH B 41 541 80 HOH HOH . 
L 5 HOH B 42 542 10 HOH HOH . 
L 5 HOH B 43 543 26 HOH HOH . 
L 5 HOH B 44 544 89 HOH HOH . 
L 5 HOH B 45 545 119 HOH HOH . 
L 5 HOH B 46 546 94 HOH HOH . 
L 5 HOH B 47 547 62 HOH HOH . 
L 5 HOH B 48 548 124 HOH HOH . 
L 5 HOH B 49 549 15 HOH HOH . 
L 5 HOH B 50 550 83 HOH HOH . 
L 5 HOH B 51 551 112 HOH HOH . 
L 5 HOH B 52 552 58 HOH HOH . 
L 5 HOH B 53 553 54 HOH HOH . 
L 5 HOH B 54 554 97 HOH HOH . 
L 5 HOH B 55 555 116 HOH HOH . 
L 5 HOH B 56 556 95 HOH HOH . 
L 5 HOH B 57 557 114 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . J 4 -25.002 -28.213 22.382 1 84.03 ? C1 GOL 405 B 1 
HETATM 2 O O1 GOL . . . J 4 -25.383 -27.352 23.41 1 83.14 ? O1 GOL 405 B 1 
HETATM 3 C C2 GOL . . . J 4 -23.627 -28.799 22.779 1 83.99 ? C2 GOL 405 B 1 
HETATM 4 O O2 GOL . . . J 4 -23.543 -29.044 24.14 1 83.46 ? O2 GOL 405 B 1 
HETATM 5 C C3 GOL . . . J 4 -23.495 -30.096 21.948 1 82.65 ? C3 GOL 405 B 1 
HETATM 6 O O3 GOL . . . J 4 -22.429 -30.813 22.49 1 80.44 ? O3 GOL 405 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#