data_5OWT # _model_server_result.job_id OLaPNzEMw3LX7vh-4JNq3w _model_server_result.datetime_utc '2024-11-19 17:53:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5owt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1203}' # _entry.id 5OWT # _exptl.entry_id 5OWT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 334.329 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5S)-5-methyl-5-[4-(4-oxidanylidene-3H-quinazolin-2-yl)phenyl]imidazolidine-2,4-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OWT _cell.length_a 89 _cell.length_b 98.23 _cell.length_c 113.38 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OWT _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 F ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 F ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 F ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 F ZN ZN . A ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc5 B SG CYS 159 B CYS 1081 1_555 J ZN ZN . B ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc6 B ND1 HIS 162 B HIS 1084 1_555 J ZN ZN . B ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc7 B SG CYS 167 B CYS 1089 1_555 J ZN ZN . B ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc8 B SG CYS 170 B CYS 1092 1_555 J ZN ZN . B ZN 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? # _chem_comp.formula 'C18 H14 N4 O3' _chem_comp.formula_weight 334.329 _chem_comp.id F37 _chem_comp.mon_nstd_flag . _chem_comp.name (5S)-5-methyl-5-[4-(4-oxidanylidene-3H-quinazolin-2-yl)phenyl]imidazolidine-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C2 F37 doub 83 n n C2 N1 F37 sing 84 n n C2 N F37 sing 85 n n N1 C3 F37 sing 86 n n C3 O1 F37 doub 87 n n C3 C1 F37 sing 88 n n N C1 F37 sing 89 n n C1 C F37 sing 90 n n C1 C4 F37 sing 91 n n C4 C5 F37 sing 92 n y C4 C9 F37 doub 93 n y C5 C6 F37 doub 94 n y C6 C7 F37 sing 95 n y C9 C8 F37 sing 96 n y C8 C7 F37 doub 97 n y C7 C10 F37 sing 98 n n C10 N3 F37 sing 99 n n C10 N2 F37 doub 100 n n N3 C17 F37 sing 101 n n C17 O2 F37 doub 102 n n C17 C12 F37 sing 103 n n N2 C11 F37 sing 104 n n C11 C12 F37 sing 105 n y C11 C16 F37 doub 106 n y C12 C13 F37 doub 107 n y C16 C15 F37 sing 108 n y C15 C14 F37 doub 109 n y C14 C13 F37 sing 110 n y N1 H1 F37 sing 111 n n N H F37 sing 112 n n C HC1 F37 sing 113 n n C HC2 F37 sing 114 n n C HC3 F37 sing 115 n n C5 H5 F37 sing 116 n n C9 H9 F37 sing 117 n n C6 H6 F37 sing 118 n n C8 H8 F37 sing 119 n n N3 H3 F37 sing 120 n n C16 H16 F37 sing 121 n n C13 H13 F37 sing 122 n n C15 H15 F37 sing 123 n n C14 H14 F37 sing 124 n n # _atom_sites.entry_id 5OWT _atom_sites.fract_transf_matrix[1][1] 0.011236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01018 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1201 1 SO4 SO4 . D 2 SO4 A 1 1202 1 SO4 SO4 . E 3 F37 A 1 1203 2 F37 DRG . F 4 ZN A 1 1204 2 ZN ZN . G 2 SO4 B 1 1201 1 SO4 SO4 . H 2 SO4 B 1 1202 1 SO4 SO4 . I 3 F37 B 1 1203 1 F37 DRG . J 4 ZN B 1 1204 1 ZN ZN . K 5 HOH A 1 1301 129 HOH HOH . K 5 HOH A 2 1302 131 HOH HOH . K 5 HOH A 3 1303 142 HOH HOH . K 5 HOH A 4 1304 108 HOH HOH . K 5 HOH A 5 1305 149 HOH HOH . K 5 HOH A 6 1306 25 HOH HOH . K 5 HOH A 7 1307 111 HOH HOH . K 5 HOH A 8 1308 105 HOH HOH . K 5 HOH A 9 1309 144 HOH HOH . K 5 HOH A 10 1310 10 HOH HOH . K 5 HOH A 11 1311 86 HOH HOH . K 5 HOH A 12 1312 110 HOH HOH . K 5 HOH A 13 1313 79 HOH HOH . K 5 HOH A 14 1314 15 HOH HOH . K 5 HOH A 15 1315 90 HOH HOH . K 5 HOH A 16 1316 140 HOH HOH . K 5 HOH A 17 1317 36 HOH HOH . K 5 HOH A 18 1318 16 HOH HOH . K 5 HOH A 19 1319 13 HOH HOH . K 5 HOH A 20 1320 33 HOH HOH . K 5 HOH A 21 1321 71 HOH HOH . K 5 HOH A 22 1322 102 HOH HOH . K 5 HOH A 23 1323 116 HOH HOH . K 5 HOH A 24 1324 46 HOH HOH . K 5 HOH A 25 1325 115 HOH HOH . K 5 HOH A 26 1326 96 HOH HOH . K 5 HOH A 27 1327 57 HOH HOH . K 5 HOH A 28 1328 134 HOH HOH . K 5 HOH A 29 1329 65 HOH HOH . K 5 HOH A 30 1330 119 HOH HOH . K 5 HOH A 31 1331 84 HOH HOH . K 5 HOH A 32 1332 61 HOH HOH . K 5 HOH A 33 1333 117 HOH HOH . K 5 HOH A 34 1334 62 HOH HOH . K 5 HOH A 35 1335 4 HOH HOH . K 5 HOH A 36 1336 74 HOH HOH . K 5 HOH A 37 1337 20 HOH HOH . K 5 HOH A 38 1338 100 HOH HOH . K 5 HOH A 39 1339 64 HOH HOH . K 5 HOH A 40 1340 94 HOH HOH . K 5 HOH A 41 1341 125 HOH HOH . K 5 HOH A 42 1342 39 HOH HOH . K 5 HOH A 43 1343 89 HOH HOH . K 5 HOH A 44 1344 27 HOH HOH . K 5 HOH A 45 1345 41 HOH HOH . K 5 HOH A 46 1346 73 HOH HOH . K 5 HOH A 47 1347 26 HOH HOH . K 5 HOH A 48 1348 50 HOH HOH . K 5 HOH A 49 1349 55 HOH HOH . K 5 HOH A 50 1350 118 HOH HOH . K 5 HOH A 51 1351 51 HOH HOH . K 5 HOH A 52 1352 22 HOH HOH . K 5 HOH A 53 1353 59 HOH HOH . K 5 HOH A 54 1354 8 HOH HOH . K 5 HOH A 55 1355 19 HOH HOH . K 5 HOH A 56 1356 45 HOH HOH . K 5 HOH A 57 1357 31 HOH HOH . K 5 HOH A 58 1358 9 HOH HOH . K 5 HOH A 59 1359 30 HOH HOH . K 5 HOH A 60 1360 28 HOH HOH . K 5 HOH A 61 1361 52 HOH HOH . K 5 HOH A 62 1362 147 HOH HOH . K 5 HOH A 63 1363 132 HOH HOH . K 5 HOH A 64 1364 24 HOH HOH . K 5 HOH A 65 1365 7 HOH HOH . K 5 HOH A 66 1366 69 HOH HOH . K 5 HOH A 67 1367 29 HOH HOH . K 5 HOH A 68 1368 93 HOH HOH . K 5 HOH A 69 1369 152 HOH HOH . K 5 HOH A 70 1370 137 HOH HOH . K 5 HOH A 71 1371 78 HOH HOH . K 5 HOH A 72 1372 113 HOH HOH . K 5 HOH A 73 1373 123 HOH HOH . K 5 HOH A 74 1374 14 HOH HOH . K 5 HOH A 75 1375 128 HOH HOH . K 5 HOH A 76 1376 107 HOH HOH . K 5 HOH A 77 1377 38 HOH HOH . K 5 HOH A 78 1378 47 HOH HOH . L 5 HOH B 1 1301 63 HOH HOH . L 5 HOH B 2 1302 48 HOH HOH . L 5 HOH B 3 1303 92 HOH HOH . L 5 HOH B 4 1304 148 HOH HOH . L 5 HOH B 5 1305 77 HOH HOH . L 5 HOH B 6 1306 95 HOH HOH . L 5 HOH B 7 1307 68 HOH HOH . L 5 HOH B 8 1308 133 HOH HOH . L 5 HOH B 9 1309 83 HOH HOH . L 5 HOH B 10 1310 35 HOH HOH . L 5 HOH B 11 1311 76 HOH HOH . L 5 HOH B 12 1312 87 HOH HOH . L 5 HOH B 13 1313 126 HOH HOH . L 5 HOH B 14 1314 5 HOH HOH . L 5 HOH B 15 1315 97 HOH HOH . L 5 HOH B 16 1316 82 HOH HOH . L 5 HOH B 17 1317 80 HOH HOH . L 5 HOH B 18 1318 42 HOH HOH . L 5 HOH B 19 1319 58 HOH HOH . L 5 HOH B 20 1320 72 HOH HOH . L 5 HOH B 21 1321 85 HOH HOH . L 5 HOH B 22 1322 44 HOH HOH . L 5 HOH B 23 1323 53 HOH HOH . L 5 HOH B 24 1324 99 HOH HOH . L 5 HOH B 25 1325 81 HOH HOH . L 5 HOH B 26 1326 49 HOH HOH . L 5 HOH B 27 1327 2 HOH HOH . L 5 HOH B 28 1328 143 HOH HOH . L 5 HOH B 29 1329 23 HOH HOH . L 5 HOH B 30 1330 139 HOH HOH . L 5 HOH B 31 1331 3 HOH HOH . L 5 HOH B 32 1332 75 HOH HOH . L 5 HOH B 33 1333 141 HOH HOH . L 5 HOH B 34 1334 153 HOH HOH . L 5 HOH B 35 1335 11 HOH HOH . L 5 HOH B 36 1336 21 HOH HOH . L 5 HOH B 37 1337 43 HOH HOH . L 5 HOH B 38 1338 112 HOH HOH . L 5 HOH B 39 1339 70 HOH HOH . L 5 HOH B 40 1340 40 HOH HOH . L 5 HOH B 41 1341 60 HOH HOH . L 5 HOH B 42 1342 34 HOH HOH . L 5 HOH B 43 1343 37 HOH HOH . L 5 HOH B 44 1344 66 HOH HOH . L 5 HOH B 45 1345 104 HOH HOH . L 5 HOH B 46 1346 101 HOH HOH . L 5 HOH B 47 1347 18 HOH HOH . L 5 HOH B 48 1348 56 HOH HOH . L 5 HOH B 49 1349 138 HOH HOH . L 5 HOH B 50 1350 154 HOH HOH . L 5 HOH B 51 1351 98 HOH HOH . L 5 HOH B 52 1352 32 HOH HOH . L 5 HOH B 53 1353 145 HOH HOH . L 5 HOH B 54 1354 88 HOH HOH . L 5 HOH B 55 1355 121 HOH HOH . L 5 HOH B 56 1356 136 HOH HOH . L 5 HOH B 57 1357 114 HOH HOH . L 5 HOH B 58 1358 150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O F37 . . . I 3 -50.693 -45.142 24.759 1 67.02 ? O F37 1203 B 1 HETATM 2 C C2 F37 . . . I 3 -50.468 -44.164 24.057 1 59.42 ? C2 F37 1203 B 1 HETATM 3 N N1 F37 . . . I 3 -49.237 -43.771 23.726 1 59.1 ? N1 F37 1203 B 1 HETATM 4 C C3 F37 . . . I 3 -49.399 -42.711 22.963 1 55.21 ? C3 F37 1203 B 1 HETATM 5 O O1 F37 . . . I 3 -48.452 -42.038 22.567 1 58.37 ? O1 F37 1203 B 1 HETATM 6 N N F37 . . . I 3 -51.409 -43.414 23.497 1 52.58 ? N F37 1203 B 1 HETATM 7 C C1 F37 . . . I 3 -50.726 -42.414 22.928 1 52.11 ? C1 F37 1203 B 1 HETATM 8 C C F37 . . . I 3 -51.23 -41.067 23.22 1 49.85 ? C F37 1203 B 1 HETATM 9 C C4 F37 . . . I 3 -51.082 -42.514 21.48 1 45.77 ? C4 F37 1203 B 1 HETATM 10 C C5 F37 . . . I 3 -50.403 -41.765 20.501 1 40.51 ? C5 F37 1203 B 1 HETATM 11 C C6 F37 . . . I 3 -50.696 -41.827 19.135 1 36.37 ? C6 F37 1203 B 1 HETATM 12 C C9 F37 . . . I 3 -52.129 -43.287 20.948 1 40.08 ? C9 F37 1203 B 1 HETATM 13 C C8 F37 . . . I 3 -52.444 -43.31 19.564 1 39.3 ? C8 F37 1203 B 1 HETATM 14 C C7 F37 . . . I 3 -51.744 -42.559 18.623 1 36.76 ? C7 F37 1203 B 1 HETATM 15 C C10 F37 . . . I 3 -52.023 -42.608 17.228 1 34.44 ? C10 F37 1203 B 1 HETATM 16 N N3 F37 . . . I 3 -51.407 -41.773 16.282 1 31.96 ? N3 F37 1203 B 1 HETATM 17 C C17 F37 . . . I 3 -51.645 -41.837 14.907 1 33.48 ? C17 F37 1203 B 1 HETATM 18 O O2 F37 . . . I 3 -51.07 -41.08 14.097 1 31.18 ? O2 F37 1203 B 1 HETATM 19 N N2 F37 . . . I 3 -52.892 -43.485 16.758 1 33.36 ? N2 F37 1203 B 1 HETATM 20 C C11 F37 . . . I 3 -53.163 -43.585 15.444 1 32.83 ? C11 F37 1203 B 1 HETATM 21 C C12 F37 . . . I 3 -52.561 -42.782 14.491 1 33.83 ? C12 F37 1203 B 1 HETATM 22 C C16 F37 . . . I 3 -54.075 -44.538 15.031 1 36.09 ? C16 F37 1203 B 1 HETATM 23 C C15 F37 . . . I 3 -54.37 -44.712 13.672 1 37.9 ? C15 F37 1203 B 1 HETATM 24 C C14 F37 . . . I 3 -53.748 -43.897 12.723 1 39.27 ? C14 F37 1203 B 1 HETATM 25 C C13 F37 . . . I 3 -52.837 -42.934 13.144 1 35.03 ? C13 F37 1203 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 494 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 25 #