data_5OXK # _model_server_result.job_id PaV6kLdNk8kb8Np4lksOEA _model_server_result.datetime_utc '2025-03-05 19:59:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oxk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":518}' # _entry.id 5OXK # _exptl.entry_id 5OXK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 89.093 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OXK _cell.length_a 100.7 _cell.length_b 110.2 _cell.length_c 105.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OXK _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id S _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H7 N O2' _chem_comp.formula_weight 89.093 _chem_comp.id ALA _chem_comp.mon_nstd_flag y _chem_comp.name ALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ALA sing 148 n n N H ALA sing 149 n n N H2 ALA sing 150 n n CA C ALA sing 151 n n CA CB ALA sing 152 n n CA HA ALA sing 153 n n C O ALA doub 154 n n C OXT ALA sing 155 n n CB HB1 ALA sing 156 n n CB HB2 ALA sing 157 n n CB HB3 ALA sing 158 n n OXT HXT ALA sing 159 n n # _atom_sites.entry_id 5OXK _atom_sites.fract_transf_matrix[1][1] 0.00993 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009506 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 501 1 PO4 PO4 . C 2 PO4 A 1 502 2 PO4 PO4 . D 2 PO4 A 1 503 3 PO4 PO4 . E 3 1PE A 1 504 4 1PE 1PE . F 4 78N A 1 505 1 78N 78N . G 4 78N A 1 506 2 78N 78N . H 5 78M A 1 507 3 78M 78M . I 4 78N A 1 508 4 78N 78N . J 4 78N A 1 509 5 78N 78N . K 4 78N A 1 510 6 78N 78N . L 4 78N A 1 511 7 78N 78N . M 4 78N A 1 512 8 78N 78N . N 4 78N A 1 513 9 78N 78N . O 4 78N A 1 514 10 78N 78N . P 4 78N A 1 515 11 78N 78N . Q 4 78N A 1 516 12 78N 78N . R 4 78N A 1 517 13 78N 78N . S 6 ALA A 1 518 1 ALA ALA . T 7 GLN A 1 519 2 GLN GLN . U 8 HOH A 1 601 47 HOH HOH . U 8 HOH A 2 602 20 HOH HOH . U 8 HOH A 3 603 39 HOH HOH . U 8 HOH A 4 604 32 HOH HOH . U 8 HOH A 5 605 28 HOH HOH . U 8 HOH A 6 606 29 HOH HOH . U 8 HOH A 7 607 23 HOH HOH . U 8 HOH A 8 608 33 HOH HOH . U 8 HOH A 9 609 5 HOH HOH . U 8 HOH A 10 610 10 HOH HOH . U 8 HOH A 11 611 15 HOH HOH . U 8 HOH A 12 612 6 HOH HOH . U 8 HOH A 13 613 4 HOH HOH . U 8 HOH A 14 614 8 HOH HOH . U 8 HOH A 15 615 21 HOH HOH . U 8 HOH A 16 616 17 HOH HOH . U 8 HOH A 17 617 11 HOH HOH . U 8 HOH A 18 618 22 HOH HOH . U 8 HOH A 19 619 18 HOH HOH . U 8 HOH A 20 620 45 HOH HOH . U 8 HOH A 21 621 12 HOH HOH . U 8 HOH A 22 622 36 HOH HOH . U 8 HOH A 23 623 7 HOH HOH . U 8 HOH A 24 624 9 HOH HOH . U 8 HOH A 25 625 42 HOH HOH . U 8 HOH A 26 626 13 HOH HOH . U 8 HOH A 27 627 14 HOH HOH . U 8 HOH A 28 628 26 HOH HOH . U 8 HOH A 29 629 1 HOH HOH . U 8 HOH A 30 630 41 HOH HOH . U 8 HOH A 31 631 27 HOH HOH . U 8 HOH A 32 632 34 HOH HOH . U 8 HOH A 33 633 3 HOH HOH . U 8 HOH A 34 634 24 HOH HOH . U 8 HOH A 35 635 25 HOH HOH . U 8 HOH A 36 636 19 HOH HOH . U 8 HOH A 37 637 16 HOH HOH . U 8 HOH A 38 638 2 HOH HOH . U 8 HOH A 39 639 35 HOH HOH . U 8 HOH A 40 640 31 HOH HOH . U 8 HOH A 41 641 37 HOH HOH . U 8 HOH A 42 642 30 HOH HOH . U 8 HOH A 43 643 43 HOH HOH . U 8 HOH A 44 644 44 HOH HOH . U 8 HOH A 45 645 46 HOH HOH . U 8 HOH A 46 646 38 HOH HOH . U 8 HOH A 47 647 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ALA . . . S 6 20.949 15.053 -2.309 1 71.27 ? N ALA 518 A 1 HETATM 2 C CA ALA . . . S 6 22.345 15.46 -2.167 1 73.44 ? CA ALA 518 A 1 HETATM 3 C C ALA . . . S 6 22.96 15.824 -3.516 1 77.57 ? C ALA 518 A 1 HETATM 4 O O ALA . . . S 6 22.495 15.373 -4.563 1 78.56 ? O ALA 518 A 1 HETATM 5 C CB ALA . . . S 6 23.153 14.362 -1.494 1 71.68 ? CB ALA 518 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #