data_5OXM # _model_server_result.job_id DXwOiLshCHnUQzPyFGIWrA _model_server_result.datetime_utc '2024-11-05 06:40:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oxm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 5OXM # _exptl.entry_id 5OXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OXM _cell.length_a 100.6 _cell.length_b 109 _cell.length_c 107 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 357 n n P O2 PO4 sing 358 n n P O3 PO4 sing 359 n n P O4 PO4 sing 360 n n # _atom_sites.entry_id 5OXM _atom_sites.fract_transf_matrix[1][1] 0.00994 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009346 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 501 1 PO4 PO4 . C 2 PO4 A 1 502 2 PO4 PO4 . D 2 PO4 A 1 503 3 PO4 PO4 . E 2 PO4 A 1 504 4 PO4 PO4 . F 3 78N A 1 505 1 78N 78N . G 3 78N A 1 506 2 78N 78N . H 4 78M A 1 507 3 78M 78M . I 3 78N A 1 508 4 78N 78N . J 3 78N A 1 509 5 78N 78N . K 3 78N A 1 510 6 78N 78N . L 3 78N A 1 511 7 78N 78N . M 3 78N A 1 512 8 78N 78N . N 3 78N A 1 513 9 78N 78N . O 3 78N A 1 514 10 78N 78N . P 3 78N A 1 515 11 78N 78N . Q 4 78M A 1 516 12 78M 78M . R 3 78N A 1 517 13 78N 78N . S 3 78N A 1 518 14 78N 78N . T 3 78N A 1 519 15 78N 78N . U 3 78N A 1 520 16 78N 78N . V 5 ASP A 1 521 1 ASP ASP . W 6 GLU A 1 522 2 GLU GLU . X 7 HOH A 1 601 2 HOH HOH . X 7 HOH A 2 602 10 HOH HOH . X 7 HOH A 3 603 12 HOH HOH . X 7 HOH A 4 604 18 HOH HOH . X 7 HOH A 5 605 28 HOH HOH . X 7 HOH A 6 606 27 HOH HOH . X 7 HOH A 7 607 1 HOH HOH . X 7 HOH A 8 608 15 HOH HOH . X 7 HOH A 9 609 8 HOH HOH . X 7 HOH A 10 610 4 HOH HOH . X 7 HOH A 11 611 13 HOH HOH . X 7 HOH A 12 612 17 HOH HOH . X 7 HOH A 13 613 5 HOH HOH . X 7 HOH A 14 614 6 HOH HOH . X 7 HOH A 15 615 25 HOH HOH . X 7 HOH A 16 616 7 HOH HOH . X 7 HOH A 17 617 26 HOH HOH . X 7 HOH A 18 618 23 HOH HOH . X 7 HOH A 19 619 24 HOH HOH . X 7 HOH A 20 620 11 HOH HOH . X 7 HOH A 21 621 3 HOH HOH . X 7 HOH A 22 622 29 HOH HOH . X 7 HOH A 23 623 22 HOH HOH . X 7 HOH A 24 624 16 HOH HOH . X 7 HOH A 25 625 21 HOH HOH . X 7 HOH A 26 626 19 HOH HOH . X 7 HOH A 27 627 9 HOH HOH . X 7 HOH A 28 628 20 HOH HOH . X 7 HOH A 29 629 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 23.402 18.432 2.758 1 118.28 ? P PO4 504 A 1 HETATM 2 O O1 PO4 . . . E 2 22.839 18.608 1.329 1 139.14 ? O1 PO4 504 A 1 HETATM 3 O O2 PO4 . . . E 2 24.729 19.189 2.88 1 128.15 ? O2 PO4 504 A 1 HETATM 4 O O3 PO4 . . . E 2 23.643 16.932 3.042 1 130.59 ? O3 PO4 504 A 1 HETATM 5 O O4 PO4 . . . E 2 22.365 18.963 3.743 1 120.18 ? O4 PO4 504 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #