data_5OXM
#
_model_server_result.job_id            TFK84byhYFF5SaLgDdTClg 
_model_server_result.datetime_utc      '2024-11-23 18:18:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oxm 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":521}' 
#
_entry.id    5OXM 
#
_exptl.entry_id    5OXM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              133.103 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ASPARTIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5OXM 
_cell.length_a            100.6 
_cell.length_b            109 
_cell.length_c            107 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OXM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             V 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H7 N O4' 
_chem_comp.formula_weight    133.103 
_chem_comp.id                ASP 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              'ASPARTIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ASP sing 165 n n 
N H ASP sing 166 n n 
N H2 ASP sing 167 n n 
CA C ASP sing 168 n n 
CA CB ASP sing 169 n n 
CA HA ASP sing 170 n n 
C O ASP doub 171 n n 
C OXT ASP sing 172 n n 
CB CG ASP sing 173 n n 
CB HB2 ASP sing 174 n n 
CB HB3 ASP sing 175 n n 
CG OD1 ASP doub 176 n n 
CG OD2 ASP sing 177 n n 
OD2 HD2 ASP sing 178 n n 
OXT HXT ASP sing 179 n n 
#
_atom_sites.entry_id                     5OXM 
_atom_sites.fract_transf_matrix[1][1]    0.00994 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009174 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009346 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PO4 A 1 501 1 PO4 PO4 . 
C 2 PO4 A 1 502 2 PO4 PO4 . 
D 2 PO4 A 1 503 3 PO4 PO4 . 
E 2 PO4 A 1 504 4 PO4 PO4 . 
F 3 78N A 1 505 1 78N 78N . 
G 3 78N A 1 506 2 78N 78N . 
H 4 78M A 1 507 3 78M 78M . 
I 3 78N A 1 508 4 78N 78N . 
J 3 78N A 1 509 5 78N 78N . 
K 3 78N A 1 510 6 78N 78N . 
L 3 78N A 1 511 7 78N 78N . 
M 3 78N A 1 512 8 78N 78N . 
N 3 78N A 1 513 9 78N 78N . 
O 3 78N A 1 514 10 78N 78N . 
P 3 78N A 1 515 11 78N 78N . 
Q 4 78M A 1 516 12 78M 78M . 
R 3 78N A 1 517 13 78N 78N . 
S 3 78N A 1 518 14 78N 78N . 
T 3 78N A 1 519 15 78N 78N . 
U 3 78N A 1 520 16 78N 78N . 
V 5 ASP A 1 521 1 ASP ASP . 
W 6 GLU A 1 522 2 GLU GLU . 
X 7 HOH A 1 601 2 HOH HOH . 
X 7 HOH A 2 602 10 HOH HOH . 
X 7 HOH A 3 603 12 HOH HOH . 
X 7 HOH A 4 604 18 HOH HOH . 
X 7 HOH A 5 605 28 HOH HOH . 
X 7 HOH A 6 606 27 HOH HOH . 
X 7 HOH A 7 607 1 HOH HOH . 
X 7 HOH A 8 608 15 HOH HOH . 
X 7 HOH A 9 609 8 HOH HOH . 
X 7 HOH A 10 610 4 HOH HOH . 
X 7 HOH A 11 611 13 HOH HOH . 
X 7 HOH A 12 612 17 HOH HOH . 
X 7 HOH A 13 613 5 HOH HOH . 
X 7 HOH A 14 614 6 HOH HOH . 
X 7 HOH A 15 615 25 HOH HOH . 
X 7 HOH A 16 616 7 HOH HOH . 
X 7 HOH A 17 617 26 HOH HOH . 
X 7 HOH A 18 618 23 HOH HOH . 
X 7 HOH A 19 619 24 HOH HOH . 
X 7 HOH A 20 620 11 HOH HOH . 
X 7 HOH A 21 621 3 HOH HOH . 
X 7 HOH A 22 622 29 HOH HOH . 
X 7 HOH A 23 623 22 HOH HOH . 
X 7 HOH A 24 624 16 HOH HOH . 
X 7 HOH A 25 625 21 HOH HOH . 
X 7 HOH A 26 626 19 HOH HOH . 
X 7 HOH A 27 627 9 HOH HOH . 
X 7 HOH A 28 628 20 HOH HOH . 
X 7 HOH A 29 629 14 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ASP . . . V 5 20.302 15.82 -1.904 1 101.11 ? N ASP 521 A 1 
HETATM 2 C CA ASP . . . V 5 21.757 15.78 -1.874 1 105.27 ? CA ASP 521 A 1 
HETATM 3 C C ASP . . . V 5 22.336 15.783 -3.278 1 106.98 ? C ASP 521 A 1 
HETATM 4 O O ASP . . . V 5 22.447 14.742 -3.93 1 106.51 ? O ASP 521 A 1 
HETATM 5 C CB ASP . . . V 5 22.254 14.558 -1.1 1 101.49 ? CB ASP 521 A 1 
HETATM 6 C CG ASP . . . V 5 22.42 14.838 0.382 1 96.44 ? CG ASP 521 A 1 
HETATM 7 O OD1 ASP . . . V 5 22.308 16.015 0.783 1 97.31 ? OD1 ASP 521 A 1 
HETATM 8 O OD2 ASP . . . V 5 22.674 13.886 1.148 1 92.45 ? OD2 ASP 521 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#