data_5OY4 # _model_server_result.job_id uvH-X6htadwSj-P-DJK45Q _model_server_result.datetime_utc '2025-02-28 03:42:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oy4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":502}' # _entry.id 5OY4 # _exptl.entry_id 5OY4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 284.27 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[6-[3,4-bis(oxidanyl)phenyl]-1~{H}-pyrazolo[3,4-b]pyridin-3-yl]ethanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5OY4 _cell.length_a 152.686 _cell.length_b 152.686 _cell.length_c 212.29 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OY4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,K 1 1 B,D,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 215 A SER 215 1_555 A N PTR 216 A PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale2 A C PTR 216 A PTR 216 1_555 A N ILE 217 A ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 B C SER 215 B SER 215 1_555 B N PTR 216 B PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale4 B C PTR 216 B PTR 216 1_555 B N ILE 217 B ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C14 H12 N4 O3' _chem_comp.formula_weight 284.27 _chem_comp.id B4K _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[6-[3,4-bis(oxidanyl)phenyl]-1~{H}-pyrazolo[3,4-b]pyridin-3-yl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O18 C17 B4K sing 70 n n O20 C19 B4K sing 71 n n C17 C19 B4K doub 72 n y C17 C16 B4K sing 73 n y C19 C21 B4K sing 74 n y C16 C15 B4K doub 75 n y C21 C14 B4K doub 76 n y C15 C14 B4K sing 77 n y C14 C10 B4K sing 78 n n C10 C11 B4K sing 79 n y C10 N09 B4K doub 80 n y C11 C12 B4K doub 81 n y N09 C08 B4K sing 82 n y C12 C13 B4K sing 83 n y C08 C13 B4K doub 84 n y C08 N07 B4K sing 85 n y C13 C05 B4K sing 86 n y O03 C02 B4K doub 87 n n N07 N06 B4K sing 88 n y C05 N06 B4K doub 89 n y C05 N04 B4K sing 90 n n C02 N04 B4K sing 91 n n C02 C01 B4K sing 92 n n C15 H1 B4K sing 93 n n C21 H2 B4K sing 94 n n C01 H3 B4K sing 95 n n C01 H4 B4K sing 96 n n C01 H5 B4K sing 97 n n N04 H6 B4K sing 98 n n C11 H8 B4K sing 99 n n C12 H9 B4K sing 100 n n C16 H10 B4K sing 101 n n O18 H11 B4K sing 102 n n O20 H12 B4K sing 103 n n N07 H7 B4K sing 104 n n # _atom_sites.entry_id 5OY4 _atom_sites.fract_transf_matrix[1][1] 0.006549 _atom_sites.fract_transf_matrix[1][2] 0.003781 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004711 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 501 1385 SO4 SO4 . F 3 SO4 A 1 502 1386 SO4 SO4 . G 3 SO4 A 1 503 1387 SO4 SO4 . H 4 B4K A 1 504 2 B4K LIG . I 3 SO4 B 1 501 1385 SO4 SO4 . J 4 B4K B 1 502 1 B4K LIG . K 5 HOH A 1 601 2 HOH HOH . K 5 HOH A 2 602 3 HOH HOH . K 5 HOH A 3 603 1 HOH HOH . K 5 HOH A 4 604 4 HOH HOH . L 5 HOH B 1 601 6 HOH HOH . L 5 HOH B 2 602 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 B4K . . . J 4 104.918 61.217 45.149 1 79.38 ? C10 B4K 502 B 1 HETATM 2 C C13 B4K . . . J 4 106.307 59.402 46.65 1 81.22 ? C13 B4K 502 B 1 HETATM 3 C C15 B4K . . . J 4 104.414 63.511 44.209 1 76.71 ? C15 B4K 502 B 1 HETATM 4 C C17 B4K . . . J 4 102.493 63.836 42.788 1 81.44 ? C17 B4K 502 B 1 HETATM 5 C C21 B4K . . . J 4 102.974 61.656 43.679 1 82.8 ? C21 B4K 502 B 1 HETATM 6 C C01 B4K . . . J 4 110.18 57.492 48.337 1 95.85 ? C01 B4K 502 B 1 HETATM 7 C C02 B4K . . . J 4 109.069 58.243 47.665 1 91.27 ? C02 B4K 502 B 1 HETATM 8 O O03 B4K . . . J 4 109.283 59.176 46.894 1 89.31 ? O03 B4K 502 B 1 HETATM 9 N N04 B4K . . . J 4 107.81 57.808 47.983 1 86.97 ? N04 B4K 502 B 1 HETATM 10 C C05 B4K . . . J 4 106.587 58.278 47.538 1 83.08 ? C05 B4K 502 B 1 HETATM 11 N N06 B4K . . . J 4 105.464 57.687 47.909 1 81.17 ? N06 B4K 502 B 1 HETATM 12 N N07 B4K . . . J 4 104.451 58.39 47.29 1 79.18 ? N07 B4K 502 B 1 HETATM 13 C C08 B4K . . . J 4 104.914 59.414 46.536 1 80.22 ? C08 B4K 502 B 1 HETATM 14 N N09 B4K . . . J 4 104.194 60.275 45.816 1 79.66 ? N09 B4K 502 B 1 HETATM 15 C C11 B4K . . . J 4 106.328 61.285 45.195 1 78.51 ? C11 B4K 502 B 1 HETATM 16 C C12 B4K . . . J 4 107.038 60.364 45.96 1 79.09 ? C12 B4K 502 B 1 HETATM 17 C C14 B4K . . . J 4 104.102 62.153 44.341 1 79.33 ? C14 B4K 502 B 1 HETATM 18 C C16 B4K . . . J 4 103.616 64.347 43.44 1 77.5 ? C16 B4K 502 B 1 HETATM 19 O O18 B4K . . . J 4 101.657 64.573 42.017 1 81.31 ? O18 B4K 502 B 1 HETATM 20 C C19 B4K . . . J 4 102.176 62.479 42.914 1 85.25 ? C19 B4K 502 B 1 HETATM 21 O O20 B4K . . . J 4 101.087 61.958 42.286 1 88 ? O20 B4K 502 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 21 #