data_5OYE
#
_model_server_result.job_id            oFR2VSwwCn0i-6vqLolATQ 
_model_server_result.datetime_utc      '2024-11-13 04:05:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5oye 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":502}' 
#
_entry.id    5OYE 
#
_exptl.entry_id    5OYE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5OYE 
_cell.length_a            55.343 
_cell.length_b            95.83 
_cell.length_c            157.208 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5OYE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,H,L 1 1 
B,D,I,J,K,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide 
3 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 BGC BGC C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 BGC BGC C1 O1 . O4 HO4 . sing 
3 ? 2 4 3 BGC BGC C1 O1 . O4 HO4 . sing 
4 ? 2 5 3 XYS BGC C1 O1 . O6 HO6 . sing 
5 ? 2 6 2 XYS BGC C1 O1 . O6 HO6 . sing 
6 ? 2 7 6 GAL XYS C1 O1 . O2 HO2 . sing 
7 ? 3 2 1 BGC BGC C1 O1 . O4 HO4 . sing 
8 ? 3 3 2 BGC BGC C1 O1 . O4 HO4 . sing 
9 ? 3 4 3 BGC BGC C1 O1 . O4 HO4 . sing 
10 ? 3 5 3 XYS BGC C1 O1 . O6 HO6 . sing 
11 ? 3 6 2 XYS BGC C1 O1 . O6 HO6 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n C BGC 1 C 1 BGC E 1 BGC 
2 n C BGC 2 C 2 BGC E 2 BGC 
2 n C BGC 3 C 3 BGC E 3 BGC 
2 n C BGC 4 C 4 BGC E 4 BGC 
2 n C XYS 5 C 5 XYS F 2 XYS 
2 n C XYS 6 C 6 XYS F 1 XYS 
2 n C GAL 7 C 7 GAL G 2 GAL 
3 n D BGC 1 D 1 BGC E 5 BGC 
3 n D BGC 2 D 2 BGC E 6 BGC 
3 n D BGC 3 D 3 BGC E 7 BGC 
3 n D BGC 4 D 4 BGC E 8 BGC 
3 n D XYS 5 D 5 XYS F 4 XYS 
3 n D XYS 6 D 6 XYS F 3 XYS 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C O4 BGC . C BGC 1 1_555 C C1 BGC . C BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale2 C O4 BGC . C BGC 2 1_555 C C1 BGC . C BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.42 ? 
covale ? covale3 C O6 BGC . C BGC 2 1_555 C C1 XYS . C XYS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? 
covale ? covale4 C O4 BGC . C BGC 3 1_555 C C1 BGC . C BGC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale5 C O6 BGC . C BGC 3 1_555 C C1 XYS . C XYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
covale ? covale6 C O2 XYS . C XYS 6 1_555 C C1 GAL . C GAL 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale7 D O4 BGC . D BGC 1 1_555 D C1 BGC . D BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale8 D O4 BGC . D BGC 2 1_555 D C1 BGC . D BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale9 D O6 BGC . D BGC 2 1_555 D C1 XYS . D XYS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? 
covale ? covale10 D O4 BGC . D BGC 3 1_555 D C1 BGC . D BGC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? 
covale ? covale11 D O6 BGC . D BGC 3 1_555 D C1 XYS . D XYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 325 n n 
S O2 SO4 doub 326 n n 
S O3 SO4 sing 327 n n 
S O4 SO4 sing 328 n n 
#
_atom_sites.entry_id                     5OYE 
_atom_sites.fract_transf_matrix[1][1]    0.018069 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010435 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006361 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 SO4 A 1 501 2 SO4 SO4 . 
F 4 SO4 A 1 502 5 SO4 SO4 . 
G 4 SO4 A 1 503 6 SO4 SO4 . 
H 5 CL A 1 511 1 CL CL . 
I 4 SO4 B 1 501 1 SO4 SO4 . 
J 4 SO4 B 1 502 3 SO4 SO4 . 
K 4 SO4 B 1 503 4 SO4 SO4 . 
L 6 HOH A 1 601 9 HOH HOH . 
L 6 HOH A 2 602 100 HOH HOH . 
L 6 HOH A 3 603 29 HOH HOH . 
L 6 HOH A 4 604 11 HOH HOH . 
L 6 HOH A 5 605 32 HOH HOH . 
L 6 HOH A 6 606 41 HOH HOH . 
L 6 HOH A 7 607 85 HOH HOH . 
L 6 HOH A 8 608 20 HOH HOH . 
L 6 HOH A 9 609 76 HOH HOH . 
L 6 HOH A 10 610 68 HOH HOH . 
L 6 HOH A 11 611 43 HOH HOH . 
L 6 HOH A 12 612 78 HOH HOH . 
L 6 HOH A 13 613 65 HOH HOH . 
L 6 HOH A 14 614 14 HOH HOH . 
L 6 HOH A 15 615 6 HOH HOH . 
L 6 HOH A 16 616 21 HOH HOH . 
L 6 HOH A 17 617 40 HOH HOH . 
L 6 HOH A 18 618 69 HOH HOH . 
L 6 HOH A 19 619 19 HOH HOH . 
L 6 HOH A 20 620 12 HOH HOH . 
L 6 HOH A 21 621 18 HOH HOH . 
L 6 HOH A 22 622 42 HOH HOH . 
L 6 HOH A 23 623 31 HOH HOH . 
L 6 HOH A 24 624 3 HOH HOH . 
L 6 HOH A 25 625 67 HOH HOH . 
L 6 HOH A 26 626 23 HOH HOH . 
L 6 HOH A 27 627 70 HOH HOH . 
L 6 HOH A 28 628 94 HOH HOH . 
L 6 HOH A 29 629 17 HOH HOH . 
L 6 HOH A 30 630 13 HOH HOH . 
L 6 HOH A 31 631 38 HOH HOH . 
L 6 HOH A 32 632 15 HOH HOH . 
L 6 HOH A 33 633 25 HOH HOH . 
L 6 HOH A 34 634 92 HOH HOH . 
L 6 HOH A 35 635 89 HOH HOH . 
L 6 HOH A 36 636 16 HOH HOH . 
L 6 HOH A 37 637 77 HOH HOH . 
L 6 HOH A 38 638 98 HOH HOH . 
L 6 HOH A 39 639 4 HOH HOH . 
L 6 HOH A 40 640 2 HOH HOH . 
L 6 HOH A 41 641 30 HOH HOH . 
L 6 HOH A 42 642 58 HOH HOH . 
L 6 HOH A 43 643 72 HOH HOH . 
L 6 HOH A 44 644 97 HOH HOH . 
L 6 HOH A 45 645 93 HOH HOH . 
L 6 HOH A 46 646 99 HOH HOH . 
L 6 HOH A 47 647 71 HOH HOH . 
M 6 HOH B 1 601 73 HOH HOH . 
M 6 HOH B 2 602 47 HOH HOH . 
M 6 HOH B 3 603 33 HOH HOH . 
M 6 HOH B 4 604 84 HOH HOH . 
M 6 HOH B 5 605 51 HOH HOH . 
M 6 HOH B 6 606 39 HOH HOH . 
M 6 HOH B 7 607 79 HOH HOH . 
M 6 HOH B 8 608 59 HOH HOH . 
M 6 HOH B 9 609 34 HOH HOH . 
M 6 HOH B 10 610 45 HOH HOH . 
M 6 HOH B 11 611 74 HOH HOH . 
M 6 HOH B 12 612 86 HOH HOH . 
M 6 HOH B 13 613 48 HOH HOH . 
M 6 HOH B 14 614 91 HOH HOH . 
M 6 HOH B 15 615 10 HOH HOH . 
M 6 HOH B 16 616 35 HOH HOH . 
M 6 HOH B 17 617 95 HOH HOH . 
M 6 HOH B 18 618 66 HOH HOH . 
M 6 HOH B 19 619 64 HOH HOH . 
M 6 HOH B 20 620 37 HOH HOH . 
M 6 HOH B 21 621 49 HOH HOH . 
M 6 HOH B 22 622 75 HOH HOH . 
M 6 HOH B 23 623 62 HOH HOH . 
M 6 HOH B 24 624 8 HOH HOH . 
M 6 HOH B 25 625 61 HOH HOH . 
M 6 HOH B 26 626 46 HOH HOH . 
M 6 HOH B 27 627 44 HOH HOH . 
M 6 HOH B 28 628 27 HOH HOH . 
M 6 HOH B 29 629 60 HOH HOH . 
M 6 HOH B 30 630 88 HOH HOH . 
M 6 HOH B 31 631 54 HOH HOH . 
M 6 HOH B 32 632 56 HOH HOH . 
M 6 HOH B 33 633 36 HOH HOH . 
M 6 HOH B 34 634 53 HOH HOH . 
M 6 HOH B 35 635 5 HOH HOH . 
M 6 HOH B 36 636 22 HOH HOH . 
M 6 HOH B 37 637 80 HOH HOH . 
M 6 HOH B 38 638 83 HOH HOH . 
M 6 HOH B 39 639 55 HOH HOH . 
M 6 HOH B 40 640 57 HOH HOH . 
M 6 HOH B 41 641 96 HOH HOH . 
M 6 HOH B 42 642 81 HOH HOH . 
M 6 HOH B 43 643 26 HOH HOH . 
M 6 HOH B 44 644 24 HOH HOH . 
M 6 HOH B 45 645 90 HOH HOH . 
M 6 HOH B 46 646 82 HOH HOH . 
M 6 HOH B 47 647 63 HOH HOH . 
M 6 HOH B 48 648 87 HOH HOH . 
M 6 HOH B 49 649 52 HOH HOH . 
M 6 HOH B 50 650 28 HOH HOH . 
M 6 HOH B 51 651 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . J 4 -8.835 140.363 -1.595 0.5 59.35 ? S SO4 502 B 1 
HETATM 2 O O1 SO4 . . . J 4 -10.198 139.901 -1.884 0.5 70.52 ? O1 SO4 502 B 1 
HETATM 3 O O2 SO4 . . . J 4 -7.937 139.884 -2.661 0.5 71.2 ? O2 SO4 502 B 1 
HETATM 4 O O3 SO4 . . . J 4 -8.394 139.722 -0.353 0.5 59.72 ? O3 SO4 502 B 1 
HETATM 5 O O4 SO4 . . . J 4 -8.865 141.852 -1.562 0.5 52.98 ? O4 SO4 502 B 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           5 
#