data_5OYE # _model_server_result.job_id idUIPckkp7MCkkI1h8Ec6w _model_server_result.datetime_utc '2024-11-13 04:11:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5oye # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":503}' # _entry.id 5OYE # _exptl.entry_id 5OYE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5OYE _cell.length_a 55.343 _cell.length_b 95.83 _cell.length_c 157.208 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OYE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,L 1 1 B,D,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 I N N ? 4 J N N ? 4 K N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 BGC BGC C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BGC BGC C1 O1 . O4 HO4 . sing 3 ? 2 4 3 BGC BGC C1 O1 . O4 HO4 . sing 4 ? 2 5 3 XYS BGC C1 O1 . O6 HO6 . sing 5 ? 2 6 2 XYS BGC C1 O1 . O6 HO6 . sing 6 ? 2 7 6 GAL XYS C1 O1 . O2 HO2 . sing 7 ? 3 2 1 BGC BGC C1 O1 . O4 HO4 . sing 8 ? 3 3 2 BGC BGC C1 O1 . O4 HO4 . sing 9 ? 3 4 3 BGC BGC C1 O1 . O4 HO4 . sing 10 ? 3 5 3 XYS BGC C1 O1 . O6 HO6 . sing 11 ? 3 6 2 XYS BGC C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C BGC 1 C 1 BGC E 1 BGC 2 n C BGC 2 C 2 BGC E 2 BGC 2 n C BGC 3 C 3 BGC E 3 BGC 2 n C BGC 4 C 4 BGC E 4 BGC 2 n C XYS 5 C 5 XYS F 2 XYS 2 n C XYS 6 C 6 XYS F 1 XYS 2 n C GAL 7 C 7 GAL G 2 GAL 3 n D BGC 1 D 1 BGC E 5 BGC 3 n D BGC 2 D 2 BGC E 6 BGC 3 n D BGC 3 D 3 BGC E 7 BGC 3 n D BGC 4 D 4 BGC E 8 BGC 3 n D XYS 5 D 5 XYS F 4 XYS 3 n D XYS 6 D 6 XYS F 3 XYS # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O4 BGC . C BGC 1 1_555 C C1 BGC . C BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale2 C O4 BGC . C BGC 2 1_555 C C1 BGC . C BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.42 ? covale ? covale3 C O6 BGC . C BGC 2 1_555 C C1 XYS . C XYS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale4 C O4 BGC . C BGC 3 1_555 C C1 BGC . C BGC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale5 C O6 BGC . C BGC 3 1_555 C C1 XYS . C XYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale6 C O2 XYS . C XYS 6 1_555 C C1 GAL . C GAL 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale7 D O4 BGC . D BGC 1 1_555 D C1 BGC . D BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale8 D O4 BGC . D BGC 2 1_555 D C1 BGC . D BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale9 D O6 BGC . D BGC 2 1_555 D C1 XYS . D XYS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale10 D O4 BGC . D BGC 3 1_555 D C1 BGC . D BGC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale11 D O6 BGC . D BGC 3 1_555 D C1 XYS . D XYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 325 n n S O2 SO4 doub 326 n n S O3 SO4 sing 327 n n S O4 SO4 sing 328 n n # _atom_sites.entry_id 5OYE _atom_sites.fract_transf_matrix[1][1] 0.018069 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010435 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006361 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 SO4 A 1 501 2 SO4 SO4 . F 4 SO4 A 1 502 5 SO4 SO4 . G 4 SO4 A 1 503 6 SO4 SO4 . H 5 CL A 1 511 1 CL CL . I 4 SO4 B 1 501 1 SO4 SO4 . J 4 SO4 B 1 502 3 SO4 SO4 . K 4 SO4 B 1 503 4 SO4 SO4 . L 6 HOH A 1 601 9 HOH HOH . L 6 HOH A 2 602 100 HOH HOH . L 6 HOH A 3 603 29 HOH HOH . L 6 HOH A 4 604 11 HOH HOH . L 6 HOH A 5 605 32 HOH HOH . L 6 HOH A 6 606 41 HOH HOH . L 6 HOH A 7 607 85 HOH HOH . L 6 HOH A 8 608 20 HOH HOH . L 6 HOH A 9 609 76 HOH HOH . L 6 HOH A 10 610 68 HOH HOH . L 6 HOH A 11 611 43 HOH HOH . L 6 HOH A 12 612 78 HOH HOH . L 6 HOH A 13 613 65 HOH HOH . L 6 HOH A 14 614 14 HOH HOH . L 6 HOH A 15 615 6 HOH HOH . L 6 HOH A 16 616 21 HOH HOH . L 6 HOH A 17 617 40 HOH HOH . L 6 HOH A 18 618 69 HOH HOH . L 6 HOH A 19 619 19 HOH HOH . L 6 HOH A 20 620 12 HOH HOH . L 6 HOH A 21 621 18 HOH HOH . L 6 HOH A 22 622 42 HOH HOH . L 6 HOH A 23 623 31 HOH HOH . L 6 HOH A 24 624 3 HOH HOH . L 6 HOH A 25 625 67 HOH HOH . L 6 HOH A 26 626 23 HOH HOH . L 6 HOH A 27 627 70 HOH HOH . L 6 HOH A 28 628 94 HOH HOH . L 6 HOH A 29 629 17 HOH HOH . L 6 HOH A 30 630 13 HOH HOH . L 6 HOH A 31 631 38 HOH HOH . L 6 HOH A 32 632 15 HOH HOH . L 6 HOH A 33 633 25 HOH HOH . L 6 HOH A 34 634 92 HOH HOH . L 6 HOH A 35 635 89 HOH HOH . L 6 HOH A 36 636 16 HOH HOH . L 6 HOH A 37 637 77 HOH HOH . L 6 HOH A 38 638 98 HOH HOH . L 6 HOH A 39 639 4 HOH HOH . L 6 HOH A 40 640 2 HOH HOH . L 6 HOH A 41 641 30 HOH HOH . L 6 HOH A 42 642 58 HOH HOH . L 6 HOH A 43 643 72 HOH HOH . L 6 HOH A 44 644 97 HOH HOH . L 6 HOH A 45 645 93 HOH HOH . L 6 HOH A 46 646 99 HOH HOH . L 6 HOH A 47 647 71 HOH HOH . M 6 HOH B 1 601 73 HOH HOH . M 6 HOH B 2 602 47 HOH HOH . M 6 HOH B 3 603 33 HOH HOH . M 6 HOH B 4 604 84 HOH HOH . M 6 HOH B 5 605 51 HOH HOH . M 6 HOH B 6 606 39 HOH HOH . M 6 HOH B 7 607 79 HOH HOH . M 6 HOH B 8 608 59 HOH HOH . M 6 HOH B 9 609 34 HOH HOH . M 6 HOH B 10 610 45 HOH HOH . M 6 HOH B 11 611 74 HOH HOH . M 6 HOH B 12 612 86 HOH HOH . M 6 HOH B 13 613 48 HOH HOH . M 6 HOH B 14 614 91 HOH HOH . M 6 HOH B 15 615 10 HOH HOH . M 6 HOH B 16 616 35 HOH HOH . M 6 HOH B 17 617 95 HOH HOH . M 6 HOH B 18 618 66 HOH HOH . M 6 HOH B 19 619 64 HOH HOH . M 6 HOH B 20 620 37 HOH HOH . M 6 HOH B 21 621 49 HOH HOH . M 6 HOH B 22 622 75 HOH HOH . M 6 HOH B 23 623 62 HOH HOH . M 6 HOH B 24 624 8 HOH HOH . M 6 HOH B 25 625 61 HOH HOH . M 6 HOH B 26 626 46 HOH HOH . M 6 HOH B 27 627 44 HOH HOH . M 6 HOH B 28 628 27 HOH HOH . M 6 HOH B 29 629 60 HOH HOH . M 6 HOH B 30 630 88 HOH HOH . M 6 HOH B 31 631 54 HOH HOH . M 6 HOH B 32 632 56 HOH HOH . M 6 HOH B 33 633 36 HOH HOH . M 6 HOH B 34 634 53 HOH HOH . M 6 HOH B 35 635 5 HOH HOH . M 6 HOH B 36 636 22 HOH HOH . M 6 HOH B 37 637 80 HOH HOH . M 6 HOH B 38 638 83 HOH HOH . M 6 HOH B 39 639 55 HOH HOH . M 6 HOH B 40 640 57 HOH HOH . M 6 HOH B 41 641 96 HOH HOH . M 6 HOH B 42 642 81 HOH HOH . M 6 HOH B 43 643 26 HOH HOH . M 6 HOH B 44 644 24 HOH HOH . M 6 HOH B 45 645 90 HOH HOH . M 6 HOH B 46 646 82 HOH HOH . M 6 HOH B 47 647 63 HOH HOH . M 6 HOH B 48 648 87 HOH HOH . M 6 HOH B 49 649 52 HOH HOH . M 6 HOH B 50 650 28 HOH HOH . M 6 HOH B 51 651 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 4 -19.044 111.821 23.897 0.5 67.02 ? S SO4 503 A 1 HETATM 2 O O1 SO4 . . . G 4 -17.969 111.091 23.203 0.5 61.27 ? O1 SO4 503 A 1 HETATM 3 O O2 SO4 . . . G 4 -20.31 111.421 23.273 0.5 70.38 ? O2 SO4 503 A 1 HETATM 4 O O3 SO4 . . . G 4 -19.122 111.436 25.329 0.5 57.98 ? O3 SO4 503 A 1 HETATM 5 O O4 SO4 . . . G 4 -18.849 113.297 23.779 0.5 68.1 ? O4 SO4 503 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #