data_5P21 # _model_server_result.job_id sjd9VpTpp2Jp96u7lGg0Mw _model_server_result.datetime_utc '2024-11-02 16:23:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5p21 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":168}' # _entry.id 5P21 # _exptl.entry_id 5P21 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5P21 _cell.length_a 40.3 _cell.length_b 40.3 _cell.length_c 162.2 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5P21 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc2 A OG1 THR 35 A THR 35 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc3 C O2G GNP . A GNP 167 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc4 C O2B GNP . A GNP 167 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc5 B MG MG . A MG 168 1_555 D O HOH . A HOH 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc6 B MG MG . A MG 168 1_555 D O HOH . A HOH 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5P21 _atom_sites.fract_transf_matrix[1][1] 0.024814 _atom_sites.fract_transf_matrix[1][2] 0.014326 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028653 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006165 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 168 168 MG MG . C 3 GNP A 1 167 167 GNP GNP . D 4 HOH A 1 169 169 HOH HOH . D 4 HOH A 2 170 170 HOH HOH . D 4 HOH A 3 171 171 HOH HOH . D 4 HOH A 4 172 172 HOH HOH . D 4 HOH A 5 173 173 HOH HOH . D 4 HOH A 6 174 174 HOH HOH . D 4 HOH A 7 175 175 HOH HOH . D 4 HOH A 8 176 176 HOH HOH . D 4 HOH A 9 177 177 HOH HOH . D 4 HOH A 10 178 178 HOH HOH . D 4 HOH A 11 179 179 HOH HOH . D 4 HOH A 12 180 180 HOH HOH . D 4 HOH A 13 181 181 HOH HOH . D 4 HOH A 14 182 182 HOH HOH . D 4 HOH A 15 183 183 HOH HOH . D 4 HOH A 16 184 184 HOH HOH . D 4 HOH A 17 185 185 HOH HOH . D 4 HOH A 18 186 186 HOH HOH . D 4 HOH A 19 187 187 HOH HOH . D 4 HOH A 20 188 188 HOH HOH . D 4 HOH A 21 189 189 HOH HOH . D 4 HOH A 22 190 190 HOH HOH . D 4 HOH A 23 191 191 HOH HOH . D 4 HOH A 24 193 193 HOH HOH . D 4 HOH A 25 194 194 HOH HOH . D 4 HOH A 26 195 195 HOH HOH . D 4 HOH A 27 196 196 HOH HOH . D 4 HOH A 28 197 197 HOH HOH . D 4 HOH A 29 198 198 HOH HOH . D 4 HOH A 30 200 200 HOH HOH . D 4 HOH A 31 201 201 HOH HOH . D 4 HOH A 32 202 202 HOH HOH . D 4 HOH A 33 203 203 HOH HOH . D 4 HOH A 34 204 204 HOH HOH . D 4 HOH A 35 205 205 HOH HOH . D 4 HOH A 36 206 206 HOH HOH . D 4 HOH A 37 207 207 HOH HOH . D 4 HOH A 38 208 208 HOH HOH . D 4 HOH A 39 209 209 HOH HOH . D 4 HOH A 40 210 210 HOH HOH . D 4 HOH A 41 212 212 HOH HOH . D 4 HOH A 42 213 213 HOH HOH . D 4 HOH A 43 214 214 HOH HOH . D 4 HOH A 44 215 215 HOH HOH . D 4 HOH A 45 216 216 HOH HOH . D 4 HOH A 46 217 217 HOH HOH . D 4 HOH A 47 218 218 HOH HOH . D 4 HOH A 48 219 219 HOH HOH . D 4 HOH A 49 220 220 HOH HOH . D 4 HOH A 50 221 221 HOH HOH . D 4 HOH A 51 222 222 HOH HOH . D 4 HOH A 52 223 223 HOH HOH . D 4 HOH A 53 224 224 HOH HOH . D 4 HOH A 54 225 225 HOH HOH . D 4 HOH A 55 227 227 HOH HOH . D 4 HOH A 56 228 228 HOH HOH . D 4 HOH A 57 229 229 HOH HOH . D 4 HOH A 58 230 230 HOH HOH . D 4 HOH A 59 231 231 HOH HOH . D 4 HOH A 60 232 232 HOH HOH . D 4 HOH A 61 233 233 HOH HOH . D 4 HOH A 62 234 234 HOH HOH . D 4 HOH A 63 235 235 HOH HOH . D 4 HOH A 64 236 236 HOH HOH . D 4 HOH A 65 237 237 HOH HOH . D 4 HOH A 66 238 238 HOH HOH . D 4 HOH A 67 240 240 HOH HOH . D 4 HOH A 68 241 241 HOH HOH . D 4 HOH A 69 242 242 HOH HOH . D 4 HOH A 70 243 243 HOH HOH . D 4 HOH A 71 244 244 HOH HOH . D 4 HOH A 72 245 245 HOH HOH . D 4 HOH A 73 246 246 HOH HOH . D 4 HOH A 74 247 247 HOH HOH . D 4 HOH A 75 248 248 HOH HOH . D 4 HOH A 76 249 249 HOH HOH . D 4 HOH A 77 250 250 HOH HOH . D 4 HOH A 78 252 252 HOH HOH . D 4 HOH A 79 253 253 HOH HOH . D 4 HOH A 80 254 254 HOH HOH . D 4 HOH A 81 255 255 HOH HOH . D 4 HOH A 82 256 256 HOH HOH . D 4 HOH A 83 257 257 HOH HOH . D 4 HOH A 84 258 258 HOH HOH . D 4 HOH A 85 259 259 HOH HOH . D 4 HOH A 86 260 260 HOH HOH . D 4 HOH A 87 261 261 HOH HOH . D 4 HOH A 88 262 262 HOH HOH . D 4 HOH A 89 263 263 HOH HOH . D 4 HOH A 90 264 264 HOH HOH . D 4 HOH A 91 265 265 HOH HOH . D 4 HOH A 92 266 266 HOH HOH . D 4 HOH A 93 267 267 HOH HOH . D 4 HOH A 94 268 268 HOH HOH . D 4 HOH A 95 269 269 HOH HOH . D 4 HOH A 96 270 270 HOH HOH . D 4 HOH A 97 271 271 HOH HOH . D 4 HOH A 98 272 272 HOH HOH . D 4 HOH A 99 273 273 HOH HOH . D 4 HOH A 100 274 274 HOH HOH . D 4 HOH A 101 275 275 HOH HOH . D 4 HOH A 102 276 276 HOH HOH . D 4 HOH A 103 277 277 HOH HOH . D 4 HOH A 104 278 278 HOH HOH . D 4 HOH A 105 279 279 HOH HOH . D 4 HOH A 106 281 281 HOH HOH . D 4 HOH A 107 282 282 HOH HOH . D 4 HOH A 108 283 283 HOH HOH . D 4 HOH A 109 284 284 HOH HOH . D 4 HOH A 110 285 285 HOH HOH . D 4 HOH A 111 286 286 HOH HOH . D 4 HOH A 112 287 287 HOH HOH . D 4 HOH A 113 288 288 HOH HOH . D 4 HOH A 114 289 289 HOH HOH . D 4 HOH A 115 290 290 HOH HOH . D 4 HOH A 116 291 291 HOH HOH . D 4 HOH A 117 292 292 HOH HOH . D 4 HOH A 118 293 293 HOH HOH . D 4 HOH A 119 294 294 HOH HOH . D 4 HOH A 120 296 296 HOH HOH . D 4 HOH A 121 297 297 HOH HOH . D 4 HOH A 122 300 300 HOH HOH . D 4 HOH A 123 301 301 HOH HOH . D 4 HOH A 124 303 303 HOH HOH . D 4 HOH A 125 304 304 HOH HOH . D 4 HOH A 126 305 305 HOH HOH . D 4 HOH A 127 306 306 HOH HOH . D 4 HOH A 128 307 307 HOH HOH . D 4 HOH A 129 309 309 HOH HOH . D 4 HOH A 130 311 311 HOH HOH . D 4 HOH A 131 312 312 HOH HOH . D 4 HOH A 132 315 315 HOH HOH . D 4 HOH A 133 316 316 HOH HOH . D 4 HOH A 134 317 317 HOH HOH . D 4 HOH A 135 318 318 HOH HOH . D 4 HOH A 136 319 319 HOH HOH . D 4 HOH A 137 320 320 HOH HOH . D 4 HOH A 138 321 321 HOH HOH . D 4 HOH A 139 322 322 HOH HOH . D 4 HOH A 140 324 324 HOH HOH . D 4 HOH A 141 325 325 HOH HOH . D 4 HOH A 142 326 326 HOH HOH . D 4 HOH A 143 327 327 HOH HOH . D 4 HOH A 144 330 330 HOH HOH . D 4 HOH A 145 331 331 HOH HOH . D 4 HOH A 146 332 332 HOH HOH . D 4 HOH A 147 333 333 HOH HOH . D 4 HOH A 148 334 334 HOH HOH . D 4 HOH A 149 335 335 HOH HOH . D 4 HOH A 150 336 336 HOH HOH . D 4 HOH A 151 339 339 HOH HOH . D 4 HOH A 152 340 340 HOH HOH . D 4 HOH A 153 341 341 HOH HOH . D 4 HOH A 154 342 342 HOH HOH . D 4 HOH A 155 343 343 HOH HOH . D 4 HOH A 156 344 344 HOH HOH . D 4 HOH A 157 345 345 HOH HOH . D 4 HOH A 158 346 346 HOH HOH . D 4 HOH A 159 347 347 HOH HOH . D 4 HOH A 160 348 348 HOH HOH . D 4 HOH A 161 349 349 HOH HOH . D 4 HOH A 162 350 350 HOH HOH . D 4 HOH A 163 351 351 HOH HOH . D 4 HOH A 164 352 352 HOH HOH . D 4 HOH A 165 353 353 HOH HOH . D 4 HOH A 166 354 354 HOH HOH . D 4 HOH A 167 356 356 HOH HOH . D 4 HOH A 168 358 358 HOH HOH . D 4 HOH A 169 359 359 HOH HOH . D 4 HOH A 170 360 360 HOH HOH . D 4 HOH A 171 361 361 HOH HOH . D 4 HOH A 172 362 362 HOH HOH . D 4 HOH A 173 364 364 HOH HOH . D 4 HOH A 174 366 366 HOH HOH . D 4 HOH A 175 367 367 HOH HOH . D 4 HOH A 176 369 369 HOH HOH . D 4 HOH A 177 370 370 HOH HOH . D 4 HOH A 178 371 371 HOH HOH . D 4 HOH A 179 372 372 HOH HOH . D 4 HOH A 180 373 373 HOH HOH . D 4 HOH A 181 374 374 HOH HOH . D 4 HOH A 182 376 376 HOH HOH . D 4 HOH A 183 378 378 HOH HOH . D 4 HOH A 184 379 379 HOH HOH . D 4 HOH A 185 380 380 HOH HOH . D 4 HOH A 186 381 381 HOH HOH . D 4 HOH A 187 382 382 HOH HOH . D 4 HOH A 188 383 383 HOH HOH . D 4 HOH A 189 384 384 HOH HOH . D 4 HOH A 190 385 385 HOH HOH . D 4 HOH A 191 386 386 HOH HOH . D 4 HOH A 192 387 387 HOH HOH . D 4 HOH A 193 388 388 HOH HOH . D 4 HOH A 194 389 389 HOH HOH . D 4 HOH A 195 390 390 HOH HOH . D 4 HOH A 196 392 392 HOH HOH . D 4 HOH A 197 394 394 HOH HOH . D 4 HOH A 198 395 395 HOH HOH . D 4 HOH A 199 396 396 HOH HOH . D 4 HOH A 200 397 397 HOH HOH . D 4 HOH A 201 398 398 HOH HOH . D 4 HOH A 202 399 399 HOH HOH . D 4 HOH A 203 400 400 HOH HOH . D 4 HOH A 204 401 401 HOH HOH . D 4 HOH A 205 402 402 HOH HOH . D 4 HOH A 206 403 403 HOH HOH . D 4 HOH A 207 404 404 HOH HOH . D 4 HOH A 208 405 405 HOH HOH . D 4 HOH A 209 406 406 HOH HOH . D 4 HOH A 210 407 407 HOH HOH . D 4 HOH A 211 408 408 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.771 _atom_site.Cartn_y 33.86 _atom_site.Cartn_z 19.213 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 168 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #