data_5P8Z # _model_server_result.job_id AT1bnmRf6lZsFQaWahmx9Q _model_server_result.datetime_utc '2024-11-25 18:33:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5p8z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5P8Z # _exptl.entry_id 5P8Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5P8Z _cell.length_a 49.897 _cell.length_b 54.136 _cell.length_c 81.231 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5P8Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 141 A ASP 141 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc2 A OD2 ASP 169 A ASP 169 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc3 A OD1 ASN 170 A ASN 170 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc4 B MG MG . A MG 301 1_555 F O15 766 . A 766 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc5 B MG MG . A MG 301 1_555 F O16 766 . A 766 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc6 B MG MG . A MG 301 1_555 I O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5P8Z _atom_sites.fract_transf_matrix[1][1] 0.020041 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012311 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 1 MG MG . C 3 CL A 1 302 1 CL CL . D 3 CL A 1 303 1 CL CL . E 4 SO4 A 1 304 1 SO4 SO4 . F 5 766 A 1 305 1 766 LIG . G 6 NHE A 1 306 1 NHE NHE . H 7 D1D A 1 307 1 D1D DTS . I 8 HOH A 1 401 250 HOH HOH . I 8 HOH A 2 402 252 HOH HOH . I 8 HOH A 3 403 48 HOH HOH . I 8 HOH A 4 404 92 HOH HOH . I 8 HOH A 5 405 109 HOH HOH . I 8 HOH A 6 406 138 HOH HOH . I 8 HOH A 7 407 18 HOH HOH . I 8 HOH A 8 408 222 HOH HOH . I 8 HOH A 9 409 220 HOH HOH . I 8 HOH A 10 410 45 HOH HOH . I 8 HOH A 11 411 33 HOH HOH . I 8 HOH A 12 412 116 HOH HOH . I 8 HOH A 13 413 170 HOH HOH . I 8 HOH A 14 414 118 HOH HOH . I 8 HOH A 15 415 150 HOH HOH . I 8 HOH A 16 416 60 HOH HOH . I 8 HOH A 17 417 161 HOH HOH . I 8 HOH A 18 418 157 HOH HOH . I 8 HOH A 19 419 68 HOH HOH . I 8 HOH A 20 420 142 HOH HOH . I 8 HOH A 21 421 183 HOH HOH . I 8 HOH A 22 422 103 HOH HOH . I 8 HOH A 23 423 166 HOH HOH . I 8 HOH A 24 424 191 HOH HOH . I 8 HOH A 25 425 201 HOH HOH . I 8 HOH A 26 426 135 HOH HOH . I 8 HOH A 27 427 164 HOH HOH . I 8 HOH A 28 428 42 HOH HOH . I 8 HOH A 29 429 175 HOH HOH . I 8 HOH A 30 430 105 HOH HOH . I 8 HOH A 31 431 233 HOH HOH . I 8 HOH A 32 432 147 HOH HOH . I 8 HOH A 33 433 28 HOH HOH . I 8 HOH A 34 434 75 HOH HOH . I 8 HOH A 35 435 80 HOH HOH . I 8 HOH A 36 436 29 HOH HOH . I 8 HOH A 37 437 31 HOH HOH . I 8 HOH A 38 438 163 HOH HOH . I 8 HOH A 39 439 179 HOH HOH . I 8 HOH A 40 440 54 HOH HOH . I 8 HOH A 41 441 153 HOH HOH . I 8 HOH A 42 442 197 HOH HOH . I 8 HOH A 43 443 196 HOH HOH . I 8 HOH A 44 444 96 HOH HOH . I 8 HOH A 45 445 229 HOH HOH . I 8 HOH A 46 446 25 HOH HOH . I 8 HOH A 47 447 194 HOH HOH . I 8 HOH A 48 448 112 HOH HOH . I 8 HOH A 49 449 58 HOH HOH . I 8 HOH A 50 450 26 HOH HOH . I 8 HOH A 51 451 171 HOH HOH . I 8 HOH A 52 452 146 HOH HOH . I 8 HOH A 53 453 3 HOH HOH . I 8 HOH A 54 454 110 HOH HOH . I 8 HOH A 55 455 97 HOH HOH . I 8 HOH A 56 456 55 HOH HOH . I 8 HOH A 57 457 27 HOH HOH . I 8 HOH A 58 458 9 HOH HOH . I 8 HOH A 59 459 13 HOH HOH . I 8 HOH A 60 460 53 HOH HOH . I 8 HOH A 61 461 158 HOH HOH . I 8 HOH A 62 462 209 HOH HOH . I 8 HOH A 63 463 23 HOH HOH . I 8 HOH A 64 464 36 HOH HOH . I 8 HOH A 65 465 8 HOH HOH . I 8 HOH A 66 466 35 HOH HOH . I 8 HOH A 67 467 7 HOH HOH . I 8 HOH A 68 468 69 HOH HOH . I 8 HOH A 69 469 219 HOH HOH . I 8 HOH A 70 470 160 HOH HOH . I 8 HOH A 71 471 59 HOH HOH . I 8 HOH A 72 472 50 HOH HOH . I 8 HOH A 73 473 17 HOH HOH . I 8 HOH A 74 474 22 HOH HOH . I 8 HOH A 75 475 37 HOH HOH . I 8 HOH A 76 476 6 HOH HOH . I 8 HOH A 77 477 152 HOH HOH . I 8 HOH A 78 478 185 HOH HOH . I 8 HOH A 79 479 41 HOH HOH . I 8 HOH A 80 480 113 HOH HOH . I 8 HOH A 81 481 159 HOH HOH . I 8 HOH A 82 482 115 HOH HOH . I 8 HOH A 83 483 234 HOH HOH . I 8 HOH A 84 484 76 HOH HOH . I 8 HOH A 85 485 14 HOH HOH . I 8 HOH A 86 486 61 HOH HOH . I 8 HOH A 87 487 145 HOH HOH . I 8 HOH A 88 488 173 HOH HOH . I 8 HOH A 89 489 199 HOH HOH . I 8 HOH A 90 490 188 HOH HOH . I 8 HOH A 91 491 104 HOH HOH . I 8 HOH A 92 492 10 HOH HOH . I 8 HOH A 93 493 190 HOH HOH . I 8 HOH A 94 494 181 HOH HOH . I 8 HOH A 95 495 21 HOH HOH . I 8 HOH A 96 496 192 HOH HOH . I 8 HOH A 97 497 89 HOH HOH . I 8 HOH A 98 498 63 HOH HOH . I 8 HOH A 99 499 78 HOH HOH . I 8 HOH A 100 500 34 HOH HOH . I 8 HOH A 101 501 67 HOH HOH . I 8 HOH A 102 502 144 HOH HOH . I 8 HOH A 103 503 56 HOH HOH . I 8 HOH A 104 504 198 HOH HOH . I 8 HOH A 105 505 15 HOH HOH . I 8 HOH A 106 506 5 HOH HOH . I 8 HOH A 107 507 51 HOH HOH . I 8 HOH A 108 508 2 HOH HOH . I 8 HOH A 109 509 227 HOH HOH . I 8 HOH A 110 510 84 HOH HOH . I 8 HOH A 111 511 19 HOH HOH . I 8 HOH A 112 512 47 HOH HOH . I 8 HOH A 113 513 218 HOH HOH . I 8 HOH A 114 514 119 HOH HOH . I 8 HOH A 115 515 178 HOH HOH . I 8 HOH A 116 516 81 HOH HOH . I 8 HOH A 117 517 106 HOH HOH . I 8 HOH A 118 518 99 HOH HOH . I 8 HOH A 119 519 225 HOH HOH . I 8 HOH A 120 520 208 HOH HOH . I 8 HOH A 121 521 117 HOH HOH . I 8 HOH A 122 522 100 HOH HOH . I 8 HOH A 123 523 32 HOH HOH . I 8 HOH A 124 524 244 HOH HOH . I 8 HOH A 125 525 30 HOH HOH . I 8 HOH A 126 526 62 HOH HOH . I 8 HOH A 127 527 12 HOH HOH . I 8 HOH A 128 528 169 HOH HOH . I 8 HOH A 129 529 172 HOH HOH . I 8 HOH A 130 530 226 HOH HOH . I 8 HOH A 131 531 73 HOH HOH . I 8 HOH A 132 532 156 HOH HOH . I 8 HOH A 133 533 254 HOH HOH . I 8 HOH A 134 534 130 HOH HOH . I 8 HOH A 135 535 65 HOH HOH . I 8 HOH A 136 536 86 HOH HOH . I 8 HOH A 137 537 90 HOH HOH . I 8 HOH A 138 538 82 HOH HOH . I 8 HOH A 139 539 83 HOH HOH . I 8 HOH A 140 540 221 HOH HOH . I 8 HOH A 141 541 93 HOH HOH . I 8 HOH A 142 542 87 HOH HOH . I 8 HOH A 143 543 88 HOH HOH . I 8 HOH A 144 544 102 HOH HOH . I 8 HOH A 145 545 77 HOH HOH . I 8 HOH A 146 546 128 HOH HOH . I 8 HOH A 147 547 74 HOH HOH . I 8 HOH A 148 548 180 HOH HOH . I 8 HOH A 149 549 114 HOH HOH . I 8 HOH A 150 550 39 HOH HOH . I 8 HOH A 151 551 256 HOH HOH . I 8 HOH A 152 552 149 HOH HOH . I 8 HOH A 153 553 71 HOH HOH . I 8 HOH A 154 554 255 HOH HOH . I 8 HOH A 155 555 46 HOH HOH . I 8 HOH A 156 556 189 HOH HOH . I 8 HOH A 157 557 40 HOH HOH . I 8 HOH A 158 558 241 HOH HOH . I 8 HOH A 159 559 57 HOH HOH . I 8 HOH A 160 560 228 HOH HOH . I 8 HOH A 161 561 20 HOH HOH . I 8 HOH A 162 562 79 HOH HOH . I 8 HOH A 163 563 236 HOH HOH . I 8 HOH A 164 564 43 HOH HOH . I 8 HOH A 165 565 11 HOH HOH . I 8 HOH A 166 566 176 HOH HOH . I 8 HOH A 167 567 245 HOH HOH . I 8 HOH A 168 568 186 HOH HOH . I 8 HOH A 169 569 85 HOH HOH . I 8 HOH A 170 570 24 HOH HOH . I 8 HOH A 171 571 44 HOH HOH . I 8 HOH A 172 572 132 HOH HOH . I 8 HOH A 173 573 95 HOH HOH . I 8 HOH A 174 574 70 HOH HOH . I 8 HOH A 175 575 107 HOH HOH . I 8 HOH A 176 576 257 HOH HOH . I 8 HOH A 177 577 243 HOH HOH . I 8 HOH A 178 578 174 HOH HOH . I 8 HOH A 179 579 4 HOH HOH . I 8 HOH A 180 580 108 HOH HOH . I 8 HOH A 181 581 136 HOH HOH . I 8 HOH A 182 582 91 HOH HOH . I 8 HOH A 183 583 205 HOH HOH . I 8 HOH A 184 584 251 HOH HOH . I 8 HOH A 185 585 216 HOH HOH . I 8 HOH A 186 586 141 HOH HOH . I 8 HOH A 187 587 253 HOH HOH . I 8 HOH A 188 588 231 HOH HOH . I 8 HOH A 189 589 134 HOH HOH . I 8 HOH A 190 590 64 HOH HOH . I 8 HOH A 191 591 204 HOH HOH . I 8 HOH A 192 592 167 HOH HOH . I 8 HOH A 193 593 123 HOH HOH . I 8 HOH A 194 594 249 HOH HOH . I 8 HOH A 195 595 126 HOH HOH . I 8 HOH A 196 596 177 HOH HOH . I 8 HOH A 197 597 223 HOH HOH . I 8 HOH A 198 598 203 HOH HOH . I 8 HOH A 199 599 111 HOH HOH . I 8 HOH A 200 600 165 HOH HOH . I 8 HOH A 201 601 182 HOH HOH . I 8 HOH A 202 602 202 HOH HOH . I 8 HOH A 203 603 49 HOH HOH . I 8 HOH A 204 604 206 HOH HOH . I 8 HOH A 205 605 131 HOH HOH . I 8 HOH A 206 606 247 HOH HOH . I 8 HOH A 207 607 139 HOH HOH . I 8 HOH A 208 608 133 HOH HOH . I 8 HOH A 209 609 200 HOH HOH . I 8 HOH A 210 610 248 HOH HOH . I 8 HOH A 211 611 122 HOH HOH . I 8 HOH A 212 612 154 HOH HOH . I 8 HOH A 213 613 148 HOH HOH . I 8 HOH A 214 614 210 HOH HOH . I 8 HOH A 215 615 238 HOH HOH . I 8 HOH A 216 616 143 HOH HOH . I 8 HOH A 217 617 66 HOH HOH . I 8 HOH A 218 618 52 HOH HOH . I 8 HOH A 219 619 94 HOH HOH . I 8 HOH A 220 620 215 HOH HOH . I 8 HOH A 221 621 230 HOH HOH . I 8 HOH A 222 622 72 HOH HOH . I 8 HOH A 223 623 127 HOH HOH . I 8 HOH A 224 624 232 HOH HOH . I 8 HOH A 225 625 162 HOH HOH . I 8 HOH A 226 626 140 HOH HOH . I 8 HOH A 227 627 214 HOH HOH . I 8 HOH A 228 628 168 HOH HOH . I 8 HOH A 229 629 195 HOH HOH . I 8 HOH A 230 630 124 HOH HOH . I 8 HOH A 231 631 187 HOH HOH . I 8 HOH A 232 632 207 HOH HOH . I 8 HOH A 233 633 120 HOH HOH . I 8 HOH A 234 634 224 HOH HOH . I 8 HOH A 235 635 98 HOH HOH . I 8 HOH A 236 636 212 HOH HOH . I 8 HOH A 237 637 242 HOH HOH . I 8 HOH A 238 638 239 HOH HOH . I 8 HOH A 239 639 193 HOH HOH . I 8 HOH A 240 640 240 HOH HOH . I 8 HOH A 241 641 184 HOH HOH . I 8 HOH A 242 642 211 HOH HOH . I 8 HOH A 243 643 217 HOH HOH . I 8 HOH A 244 644 151 HOH HOH . I 8 HOH A 245 645 101 HOH HOH . I 8 HOH A 246 646 235 HOH HOH . I 8 HOH A 247 647 16 HOH HOH . I 8 HOH A 248 648 38 HOH HOH . I 8 HOH A 249 649 125 HOH HOH . I 8 HOH A 250 650 246 HOH HOH . I 8 HOH A 251 651 121 HOH HOH . I 8 HOH A 252 652 1 HOH HOH . I 8 HOH A 253 653 129 HOH HOH . I 8 HOH A 254 654 237 HOH HOH . I 8 HOH A 255 655 155 HOH HOH . I 8 HOH A 256 656 213 HOH HOH . I 8 HOH A 257 657 137 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 2.902 _atom_site.Cartn_y 11.429 _atom_site.Cartn_z 28.177 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6.02 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #