data_5P9Y # _model_server_result.job_id r283BZKUyto8nBXem7PruA _model_server_result.datetime_utc '2024-11-01 18:26:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5p9y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 5P9Y # _exptl.entry_id 5P9Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5P9Y _cell.length_a 49.967 _cell.length_b 54.212 _cell.length_c 81.524 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5P9Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 G S1 D1D . A D1D 306 1_555 H C5' NHE . A NHE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? covale ? covale2 G C3 D1D . A D1D 306 1_555 H C2' NHE . A NHE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.293 ? covale ? covale3 G C3 D1D . A D1D 306 1_555 H C1' NHE . A NHE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.536 ? covale ? covale4 G C3 D1D . A D1D 306 1_555 H C3' NHE . A NHE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.419 ? covale ? covale5 G C3 D1D . A D1D 306 1_555 H C6' NHE . A NHE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.557 ? covale ? covale6 G C3 D1D . A D1D 306 1_555 H C5' NHE . A NHE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.627 ? covale ? covale7 G C3 D1D . A D1D 306 1_555 H C4' NHE . A NHE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.474 ? covale ? covale8 G C4 D1D . A D1D 306 1_555 H C4' NHE . A NHE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A OD1 ASP 141 A ASP 141 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 A OD2 ASP 169 A ASP 169 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc3 A OD1 ASN 170 A ASN 170 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc4 B MG MG . A MG 301 1_555 C O5 7JP . A 7JP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc5 B MG MG . A MG 301 1_555 J O HOH . A HOH 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 396 n n S O2 SO4 doub 397 n n S O3 SO4 sing 398 n n S O4 SO4 sing 399 n n # _atom_sites.entry_id 5P9Y _atom_sites.fract_transf_matrix[1][1] 0.020013 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018446 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 1 MG MG . C 3 7JP A 1 302 1 7JP LIG . D 4 CL A 1 303 1 CL CL . E 4 CL A 1 304 2 CL CL . F 5 SO4 A 1 305 1 SO4 SO4 . G 6 D1D A 1 306 1 D1D DTS . H 7 NHE A 1 307 1 NHE NHE . I 7 NHE A 1 308 2 NHE NHE . J 8 HOH A 1 401 219 HOH HOH . J 8 HOH A 2 402 183 HOH HOH . J 8 HOH A 3 403 224 HOH HOH . J 8 HOH A 4 404 220 HOH HOH . J 8 HOH A 5 405 177 HOH HOH . J 8 HOH A 6 406 104 HOH HOH . J 8 HOH A 7 407 86 HOH HOH . J 8 HOH A 8 408 196 HOH HOH . J 8 HOH A 9 409 138 HOH HOH . J 8 HOH A 10 410 29 HOH HOH . J 8 HOH A 11 411 33 HOH HOH . J 8 HOH A 12 412 143 HOH HOH . J 8 HOH A 13 413 139 HOH HOH . J 8 HOH A 14 414 103 HOH HOH . J 8 HOH A 15 415 223 HOH HOH . J 8 HOH A 16 416 175 HOH HOH . J 8 HOH A 17 417 172 HOH HOH . J 8 HOH A 18 418 121 HOH HOH . J 8 HOH A 19 419 132 HOH HOH . J 8 HOH A 20 420 166 HOH HOH . J 8 HOH A 21 421 18 HOH HOH . J 8 HOH A 22 422 135 HOH HOH . J 8 HOH A 23 423 97 HOH HOH . J 8 HOH A 24 424 56 HOH HOH . J 8 HOH A 25 425 225 HOH HOH . J 8 HOH A 26 426 58 HOH HOH . J 8 HOH A 27 427 148 HOH HOH . J 8 HOH A 28 428 41 HOH HOH . J 8 HOH A 29 429 127 HOH HOH . J 8 HOH A 30 430 91 HOH HOH . J 8 HOH A 31 431 96 HOH HOH . J 8 HOH A 32 432 171 HOH HOH . J 8 HOH A 33 433 31 HOH HOH . J 8 HOH A 34 434 9 HOH HOH . J 8 HOH A 35 435 71 HOH HOH . J 8 HOH A 36 436 227 HOH HOH . J 8 HOH A 37 437 44 HOH HOH . J 8 HOH A 38 438 53 HOH HOH . J 8 HOH A 39 439 159 HOH HOH . J 8 HOH A 40 440 21 HOH HOH . J 8 HOH A 41 441 28 HOH HOH . J 8 HOH A 42 442 182 HOH HOH . J 8 HOH A 43 443 129 HOH HOH . J 8 HOH A 44 444 144 HOH HOH . J 8 HOH A 45 445 57 HOH HOH . J 8 HOH A 46 446 101 HOH HOH . J 8 HOH A 47 447 133 HOH HOH . J 8 HOH A 48 448 130 HOH HOH . J 8 HOH A 49 449 118 HOH HOH . J 8 HOH A 50 450 25 HOH HOH . J 8 HOH A 51 451 26 HOH HOH . J 8 HOH A 52 452 35 HOH HOH . J 8 HOH A 53 453 67 HOH HOH . J 8 HOH A 54 454 59 HOH HOH . J 8 HOH A 55 455 77 HOH HOH . J 8 HOH A 56 456 65 HOH HOH . J 8 HOH A 57 457 8 HOH HOH . J 8 HOH A 58 458 145 HOH HOH . J 8 HOH A 59 459 125 HOH HOH . J 8 HOH A 60 460 136 HOH HOH . J 8 HOH A 61 461 202 HOH HOH . J 8 HOH A 62 462 27 HOH HOH . J 8 HOH A 63 463 14 HOH HOH . J 8 HOH A 64 464 7 HOH HOH . J 8 HOH A 65 465 23 HOH HOH . J 8 HOH A 66 466 90 HOH HOH . J 8 HOH A 67 467 37 HOH HOH . J 8 HOH A 68 468 32 HOH HOH . J 8 HOH A 69 469 6 HOH HOH . J 8 HOH A 70 470 141 HOH HOH . J 8 HOH A 71 471 3 HOH HOH . J 8 HOH A 72 472 40 HOH HOH . J 8 HOH A 73 473 80 HOH HOH . J 8 HOH A 74 474 84 HOH HOH . J 8 HOH A 75 475 152 HOH HOH . J 8 HOH A 76 476 124 HOH HOH . J 8 HOH A 77 477 52 HOH HOH . J 8 HOH A 78 478 87 HOH HOH . J 8 HOH A 79 479 12 HOH HOH . J 8 HOH A 80 480 100 HOH HOH . J 8 HOH A 81 481 94 HOH HOH . J 8 HOH A 82 482 13 HOH HOH . J 8 HOH A 83 483 22 HOH HOH . J 8 HOH A 84 484 128 HOH HOH . J 8 HOH A 85 485 126 HOH HOH . J 8 HOH A 86 486 19 HOH HOH . J 8 HOH A 87 487 160 HOH HOH . J 8 HOH A 88 488 16 HOH HOH . J 8 HOH A 89 489 5 HOH HOH . J 8 HOH A 90 490 2 HOH HOH . J 8 HOH A 91 491 72 HOH HOH . J 8 HOH A 92 492 169 HOH HOH . J 8 HOH A 93 493 49 HOH HOH . J 8 HOH A 94 494 184 HOH HOH . J 8 HOH A 95 495 156 HOH HOH . J 8 HOH A 96 496 15 HOH HOH . J 8 HOH A 97 497 61 HOH HOH . J 8 HOH A 98 498 54 HOH HOH . J 8 HOH A 99 499 149 HOH HOH . J 8 HOH A 100 500 161 HOH HOH . J 8 HOH A 101 501 10 HOH HOH . J 8 HOH A 102 502 222 HOH HOH . J 8 HOH A 103 503 178 HOH HOH . J 8 HOH A 104 504 150 HOH HOH . J 8 HOH A 105 505 50 HOH HOH . J 8 HOH A 106 506 131 HOH HOH . J 8 HOH A 107 507 98 HOH HOH . J 8 HOH A 108 508 30 HOH HOH . J 8 HOH A 109 509 46 HOH HOH . J 8 HOH A 110 510 74 HOH HOH . J 8 HOH A 111 511 176 HOH HOH . J 8 HOH A 112 512 167 HOH HOH . J 8 HOH A 113 513 137 HOH HOH . J 8 HOH A 114 514 164 HOH HOH . J 8 HOH A 115 515 95 HOH HOH . J 8 HOH A 116 516 206 HOH HOH . J 8 HOH A 117 517 174 HOH HOH . J 8 HOH A 118 518 147 HOH HOH . J 8 HOH A 119 519 153 HOH HOH . J 8 HOH A 120 520 113 HOH HOH . J 8 HOH A 121 521 81 HOH HOH . J 8 HOH A 122 522 78 HOH HOH . J 8 HOH A 123 523 73 HOH HOH . J 8 HOH A 124 524 83 HOH HOH . J 8 HOH A 125 525 60 HOH HOH . J 8 HOH A 126 526 36 HOH HOH . J 8 HOH A 127 527 20 HOH HOH . J 8 HOH A 128 528 17 HOH HOH . J 8 HOH A 129 529 70 HOH HOH . J 8 HOH A 130 530 105 HOH HOH . J 8 HOH A 131 531 42 HOH HOH . J 8 HOH A 132 532 142 HOH HOH . J 8 HOH A 133 533 85 HOH HOH . J 8 HOH A 134 534 204 HOH HOH . J 8 HOH A 135 535 79 HOH HOH . J 8 HOH A 136 536 34 HOH HOH . J 8 HOH A 137 537 123 HOH HOH . J 8 HOH A 138 538 38 HOH HOH . J 8 HOH A 139 539 102 HOH HOH . J 8 HOH A 140 540 75 HOH HOH . J 8 HOH A 141 541 207 HOH HOH . J 8 HOH A 142 542 45 HOH HOH . J 8 HOH A 143 543 55 HOH HOH . J 8 HOH A 144 544 163 HOH HOH . J 8 HOH A 145 545 180 HOH HOH . J 8 HOH A 146 546 205 HOH HOH . J 8 HOH A 147 547 69 HOH HOH . J 8 HOH A 148 548 63 HOH HOH . J 8 HOH A 149 549 68 HOH HOH . J 8 HOH A 150 550 76 HOH HOH . J 8 HOH A 151 551 11 HOH HOH . J 8 HOH A 152 552 93 HOH HOH . J 8 HOH A 153 553 39 HOH HOH . J 8 HOH A 154 554 140 HOH HOH . J 8 HOH A 155 555 151 HOH HOH . J 8 HOH A 156 556 195 HOH HOH . J 8 HOH A 157 557 43 HOH HOH . J 8 HOH A 158 558 99 HOH HOH . J 8 HOH A 159 559 89 HOH HOH . J 8 HOH A 160 560 146 HOH HOH . J 8 HOH A 161 561 201 HOH HOH . J 8 HOH A 162 562 24 HOH HOH . J 8 HOH A 163 563 82 HOH HOH . J 8 HOH A 164 564 120 HOH HOH . J 8 HOH A 165 565 198 HOH HOH . J 8 HOH A 166 566 226 HOH HOH . J 8 HOH A 167 567 4 HOH HOH . J 8 HOH A 168 568 194 HOH HOH . J 8 HOH A 169 569 111 HOH HOH . J 8 HOH A 170 570 210 HOH HOH . J 8 HOH A 171 571 107 HOH HOH . J 8 HOH A 172 572 62 HOH HOH . J 8 HOH A 173 573 211 HOH HOH . J 8 HOH A 174 574 216 HOH HOH . J 8 HOH A 175 575 116 HOH HOH . J 8 HOH A 176 576 109 HOH HOH . J 8 HOH A 177 577 48 HOH HOH . J 8 HOH A 178 578 154 HOH HOH . J 8 HOH A 179 579 117 HOH HOH . J 8 HOH A 180 580 134 HOH HOH . J 8 HOH A 181 581 199 HOH HOH . J 8 HOH A 182 582 115 HOH HOH . J 8 HOH A 183 583 88 HOH HOH . J 8 HOH A 184 584 173 HOH HOH . J 8 HOH A 185 585 229 HOH HOH . J 8 HOH A 186 586 200 HOH HOH . J 8 HOH A 187 587 108 HOH HOH . J 8 HOH A 188 588 181 HOH HOH . J 8 HOH A 189 589 51 HOH HOH . J 8 HOH A 190 590 168 HOH HOH . J 8 HOH A 191 591 165 HOH HOH . J 8 HOH A 192 592 162 HOH HOH . J 8 HOH A 193 593 122 HOH HOH . J 8 HOH A 194 594 64 HOH HOH . J 8 HOH A 195 595 112 HOH HOH . J 8 HOH A 196 596 185 HOH HOH . J 8 HOH A 197 597 106 HOH HOH . J 8 HOH A 198 598 203 HOH HOH . J 8 HOH A 199 599 92 HOH HOH . J 8 HOH A 200 600 186 HOH HOH . J 8 HOH A 201 601 193 HOH HOH . J 8 HOH A 202 602 155 HOH HOH . J 8 HOH A 203 603 191 HOH HOH . J 8 HOH A 204 604 228 HOH HOH . J 8 HOH A 205 605 221 HOH HOH . J 8 HOH A 206 606 157 HOH HOH . J 8 HOH A 207 607 170 HOH HOH . J 8 HOH A 208 608 110 HOH HOH . J 8 HOH A 209 609 212 HOH HOH . J 8 HOH A 210 610 208 HOH HOH . J 8 HOH A 211 611 190 HOH HOH . J 8 HOH A 212 612 1 HOH HOH . J 8 HOH A 213 613 114 HOH HOH . J 8 HOH A 214 614 213 HOH HOH . J 8 HOH A 215 615 179 HOH HOH . J 8 HOH A 216 616 188 HOH HOH . J 8 HOH A 217 617 158 HOH HOH . J 8 HOH A 218 618 192 HOH HOH . J 8 HOH A 219 619 197 HOH HOH . J 8 HOH A 220 620 217 HOH HOH . J 8 HOH A 221 621 189 HOH HOH . J 8 HOH A 222 622 215 HOH HOH . J 8 HOH A 223 623 209 HOH HOH . J 8 HOH A 224 624 187 HOH HOH . J 8 HOH A 225 625 218 HOH HOH . J 8 HOH A 226 626 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 5 12.405 -13.292 32.982 1 36.03 ? S SO4 305 A 1 HETATM 2 O O1 SO4 . . . F 5 12.649 -13.141 31.499 1 51.19 ? O1 SO4 305 A 1 HETATM 3 O O2 SO4 . . . F 5 11.284 -14.218 33.322 1 46.05 ? O2 SO4 305 A 1 HETATM 4 O O3 SO4 . . . F 5 12.068 -11.969 33.565 1 28.04 ? O3 SO4 305 A 1 HETATM 5 O O4 SO4 . . . F 5 13.614 -13.756 33.698 1 41.71 ? O4 SO4 305 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #