data_5PA1 # _model_server_result.job_id r7ctaXYhVISlJOAmptcOCg _model_server_result.datetime_utc '2024-11-22 22:16:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5pa1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 5PA1 # _exptl.entry_id 5PA1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5PA1 _cell.length_a 50.047 _cell.length_b 54.205 _cell.length_c 80.932 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5PA1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 F S1 D1D . A D1D 305 1_555 G C3' NHE . A NHE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.619 ? covale ? covale2 F C1 D1D . A D1D 305 1_555 G C2' NHE . A NHE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.606 ? covale ? covale3 F C2 D1D . A D1D 305 1_555 G C3' NHE . A NHE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.638 ? covale ? covale4 F O2 D1D . A D1D 305 1_555 G C2' NHE . A NHE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.509 ? covale ? covale5 F C3 D1D . A D1D 305 1_555 G C1' NHE . A NHE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.627 ? covale ? covale6 F C4 D1D . A D1D 305 1_555 G C4' NHE . A NHE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale7 F S4 D1D . A D1D 305 1_555 G C5' NHE . A NHE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.781 ? covale ? covale8 F S4 D1D . A D1D 305 1_555 G C4' NHE . A NHE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.558 ? metalc ? metalc1 A OD1 ASP 141 A ASP 141 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc2 A OD2 ASP 169 A ASP 169 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc3 A OD1 ASN 170 A ASN 170 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc4 B MG MG . A MG 301 1_555 I O11 7JS . A 7JS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc5 B MG MG . A MG 301 1_555 J O HOH . A HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 414 n n S O2 SO4 doub 415 n n S O3 SO4 sing 416 n n S O4 SO4 sing 417 n n # _atom_sites.entry_id 5PA1 _atom_sites.fract_transf_matrix[1][1] 0.019981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012356 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 1 MG MG . C 3 CL A 1 302 2 CL CL . D 4 SO4 A 1 303 1 SO4 SO4 . E 4 SO4 A 1 304 2 SO4 SO4 . F 5 D1D A 1 305 1 D1D LIG . G 6 NHE A 1 306 1 NHE NNN . H 7 SAH A 1 307 1 SAH SAH . I 8 7JS A 1 308 1 7JS LIG . J 9 HOH A 1 401 233 HOH HOH . J 9 HOH A 2 402 91 HOH HOH . J 9 HOH A 3 403 175 HOH HOH . J 9 HOH A 4 404 178 HOH HOH . J 9 HOH A 5 405 227 HOH HOH . J 9 HOH A 6 406 213 HOH HOH . J 9 HOH A 7 407 193 HOH HOH . J 9 HOH A 8 408 69 HOH HOH . J 9 HOH A 9 409 179 HOH HOH . J 9 HOH A 10 410 12 HOH HOH . J 9 HOH A 11 411 56 HOH HOH . J 9 HOH A 12 412 19 HOH HOH . J 9 HOH A 13 413 192 HOH HOH . J 9 HOH A 14 414 119 HOH HOH . J 9 HOH A 15 415 173 HOH HOH . J 9 HOH A 16 416 96 HOH HOH . J 9 HOH A 17 417 40 HOH HOH . J 9 HOH A 18 418 58 HOH HOH . J 9 HOH A 19 419 152 HOH HOH . J 9 HOH A 20 420 106 HOH HOH . J 9 HOH A 21 421 157 HOH HOH . J 9 HOH A 22 422 160 HOH HOH . J 9 HOH A 23 423 30 HOH HOH . J 9 HOH A 24 424 189 HOH HOH . J 9 HOH A 25 425 77 HOH HOH . J 9 HOH A 26 426 174 HOH HOH . J 9 HOH A 27 427 125 HOH HOH . J 9 HOH A 28 428 66 HOH HOH . J 9 HOH A 29 429 241 HOH HOH . J 9 HOH A 30 430 7 HOH HOH . J 9 HOH A 31 431 28 HOH HOH . J 9 HOH A 32 432 229 HOH HOH . J 9 HOH A 33 433 148 HOH HOH . J 9 HOH A 34 434 95 HOH HOH . J 9 HOH A 35 435 168 HOH HOH . J 9 HOH A 36 436 122 HOH HOH . J 9 HOH A 37 437 49 HOH HOH . J 9 HOH A 38 438 32 HOH HOH . J 9 HOH A 39 439 236 HOH HOH . J 9 HOH A 40 440 154 HOH HOH . J 9 HOH A 41 441 8 HOH HOH . J 9 HOH A 42 442 197 HOH HOH . J 9 HOH A 43 443 169 HOH HOH . J 9 HOH A 44 444 25 HOH HOH . J 9 HOH A 45 445 51 HOH HOH . J 9 HOH A 46 446 230 HOH HOH . J 9 HOH A 47 447 6 HOH HOH . J 9 HOH A 48 448 92 HOH HOH . J 9 HOH A 49 449 57 HOH HOH . J 9 HOH A 50 450 153 HOH HOH . J 9 HOH A 51 451 23 HOH HOH . J 9 HOH A 52 452 109 HOH HOH . J 9 HOH A 53 453 83 HOH HOH . J 9 HOH A 54 454 131 HOH HOH . J 9 HOH A 55 455 187 HOH HOH . J 9 HOH A 56 456 26 HOH HOH . J 9 HOH A 57 457 145 HOH HOH . J 9 HOH A 58 458 24 HOH HOH . J 9 HOH A 59 459 62 HOH HOH . J 9 HOH A 60 460 140 HOH HOH . J 9 HOH A 61 461 31 HOH HOH . J 9 HOH A 62 462 188 HOH HOH . J 9 HOH A 63 463 133 HOH HOH . J 9 HOH A 64 464 116 HOH HOH . J 9 HOH A 65 465 55 HOH HOH . J 9 HOH A 66 466 15 HOH HOH . J 9 HOH A 67 467 64 HOH HOH . J 9 HOH A 68 468 50 HOH HOH . J 9 HOH A 69 469 59 HOH HOH . J 9 HOH A 70 470 165 HOH HOH . J 9 HOH A 71 471 4 HOH HOH . J 9 HOH A 72 472 191 HOH HOH . J 9 HOH A 73 473 186 HOH HOH . J 9 HOH A 74 474 14 HOH HOH . J 9 HOH A 75 475 135 HOH HOH . J 9 HOH A 76 476 2 HOH HOH . J 9 HOH A 77 477 162 HOH HOH . J 9 HOH A 78 478 20 HOH HOH . J 9 HOH A 79 479 13 HOH HOH . J 9 HOH A 80 480 112 HOH HOH . J 9 HOH A 81 481 5 HOH HOH . J 9 HOH A 82 482 127 HOH HOH . J 9 HOH A 83 483 22 HOH HOH . J 9 HOH A 84 484 146 HOH HOH . J 9 HOH A 85 485 60 HOH HOH . J 9 HOH A 86 486 172 HOH HOH . J 9 HOH A 87 487 134 HOH HOH . J 9 HOH A 88 488 130 HOH HOH . J 9 HOH A 89 489 225 HOH HOH . J 9 HOH A 90 490 9 HOH HOH . J 9 HOH A 91 491 36 HOH HOH . J 9 HOH A 92 492 34 HOH HOH . J 9 HOH A 93 493 17 HOH HOH . J 9 HOH A 94 494 39 HOH HOH . J 9 HOH A 95 495 73 HOH HOH . J 9 HOH A 96 496 102 HOH HOH . J 9 HOH A 97 497 118 HOH HOH . J 9 HOH A 98 498 78 HOH HOH . J 9 HOH A 99 499 54 HOH HOH . J 9 HOH A 100 500 16 HOH HOH . J 9 HOH A 101 501 139 HOH HOH . J 9 HOH A 102 502 143 HOH HOH . J 9 HOH A 103 503 141 HOH HOH . J 9 HOH A 104 504 37 HOH HOH . J 9 HOH A 105 505 81 HOH HOH . J 9 HOH A 106 506 100 HOH HOH . J 9 HOH A 107 507 226 HOH HOH . J 9 HOH A 108 508 80 HOH HOH . J 9 HOH A 109 509 29 HOH HOH . J 9 HOH A 110 510 85 HOH HOH . J 9 HOH A 111 511 124 HOH HOH . J 9 HOH A 112 512 46 HOH HOH . J 9 HOH A 113 513 177 HOH HOH . J 9 HOH A 114 514 158 HOH HOH . J 9 HOH A 115 515 132 HOH HOH . J 9 HOH A 116 516 79 HOH HOH . J 9 HOH A 117 517 190 HOH HOH . J 9 HOH A 118 518 86 HOH HOH . J 9 HOH A 119 519 41 HOH HOH . J 9 HOH A 120 520 101 HOH HOH . J 9 HOH A 121 521 35 HOH HOH . J 9 HOH A 122 522 237 HOH HOH . J 9 HOH A 123 523 47 HOH HOH . J 9 HOH A 124 524 147 HOH HOH . J 9 HOH A 125 525 121 HOH HOH . J 9 HOH A 126 526 224 HOH HOH . J 9 HOH A 127 527 144 HOH HOH . J 9 HOH A 128 528 1 HOH HOH . J 9 HOH A 129 529 88 HOH HOH . J 9 HOH A 130 530 126 HOH HOH . J 9 HOH A 131 531 11 HOH HOH . J 9 HOH A 132 532 123 HOH HOH . J 9 HOH A 133 533 70 HOH HOH . J 9 HOH A 134 534 27 HOH HOH . J 9 HOH A 135 535 128 HOH HOH . J 9 HOH A 136 536 18 HOH HOH . J 9 HOH A 137 537 235 HOH HOH . J 9 HOH A 138 538 89 HOH HOH . J 9 HOH A 139 539 44 HOH HOH . J 9 HOH A 140 540 170 HOH HOH . J 9 HOH A 141 541 159 HOH HOH . J 9 HOH A 142 542 194 HOH HOH . J 9 HOH A 143 543 68 HOH HOH . J 9 HOH A 144 544 115 HOH HOH . J 9 HOH A 145 545 171 HOH HOH . J 9 HOH A 146 546 52 HOH HOH . J 9 HOH A 147 547 38 HOH HOH . J 9 HOH A 148 548 71 HOH HOH . J 9 HOH A 149 549 234 HOH HOH . J 9 HOH A 150 550 21 HOH HOH . J 9 HOH A 151 551 10 HOH HOH . J 9 HOH A 152 552 53 HOH HOH . J 9 HOH A 153 553 33 HOH HOH . J 9 HOH A 154 554 76 HOH HOH . J 9 HOH A 155 555 137 HOH HOH . J 9 HOH A 156 556 242 HOH HOH . J 9 HOH A 157 557 163 HOH HOH . J 9 HOH A 158 558 94 HOH HOH . J 9 HOH A 159 559 87 HOH HOH . J 9 HOH A 160 560 108 HOH HOH . J 9 HOH A 161 561 42 HOH HOH . J 9 HOH A 162 562 111 HOH HOH . J 9 HOH A 163 563 84 HOH HOH . J 9 HOH A 164 564 74 HOH HOH . J 9 HOH A 165 565 67 HOH HOH . J 9 HOH A 166 566 151 HOH HOH . J 9 HOH A 167 567 136 HOH HOH . J 9 HOH A 168 568 82 HOH HOH . J 9 HOH A 169 569 156 HOH HOH . J 9 HOH A 170 570 150 HOH HOH . J 9 HOH A 171 571 3 HOH HOH . J 9 HOH A 172 572 120 HOH HOH . J 9 HOH A 173 573 202 HOH HOH . J 9 HOH A 174 574 110 HOH HOH . J 9 HOH A 175 575 167 HOH HOH . J 9 HOH A 176 576 45 HOH HOH . J 9 HOH A 177 577 43 HOH HOH . J 9 HOH A 178 578 138 HOH HOH . J 9 HOH A 179 579 105 HOH HOH . J 9 HOH A 180 580 196 HOH HOH . J 9 HOH A 181 581 231 HOH HOH . J 9 HOH A 182 582 238 HOH HOH . J 9 HOH A 183 583 203 HOH HOH . J 9 HOH A 184 584 129 HOH HOH . J 9 HOH A 185 585 198 HOH HOH . J 9 HOH A 186 586 205 HOH HOH . J 9 HOH A 187 587 176 HOH HOH . J 9 HOH A 188 588 245 HOH HOH . J 9 HOH A 189 589 65 HOH HOH . J 9 HOH A 190 590 209 HOH HOH . J 9 HOH A 191 591 232 HOH HOH . J 9 HOH A 192 592 90 HOH HOH . J 9 HOH A 193 593 161 HOH HOH . J 9 HOH A 194 594 93 HOH HOH . J 9 HOH A 195 595 212 HOH HOH . J 9 HOH A 196 596 195 HOH HOH . J 9 HOH A 197 597 142 HOH HOH . J 9 HOH A 198 598 181 HOH HOH . J 9 HOH A 199 599 75 HOH HOH . J 9 HOH A 200 600 63 HOH HOH . J 9 HOH A 201 601 243 HOH HOH . J 9 HOH A 202 602 182 HOH HOH . J 9 HOH A 203 603 247 HOH HOH . J 9 HOH A 204 604 113 HOH HOH . J 9 HOH A 205 605 201 HOH HOH . J 9 HOH A 206 606 222 HOH HOH . J 9 HOH A 207 607 166 HOH HOH . J 9 HOH A 208 608 149 HOH HOH . J 9 HOH A 209 609 48 HOH HOH . J 9 HOH A 210 610 103 HOH HOH . J 9 HOH A 211 611 107 HOH HOH . J 9 HOH A 212 612 99 HOH HOH . J 9 HOH A 213 613 155 HOH HOH . J 9 HOH A 214 614 117 HOH HOH . J 9 HOH A 215 615 185 HOH HOH . J 9 HOH A 216 616 217 HOH HOH . J 9 HOH A 217 617 184 HOH HOH . J 9 HOH A 218 618 228 HOH HOH . J 9 HOH A 219 619 199 HOH HOH . J 9 HOH A 220 620 200 HOH HOH . J 9 HOH A 221 621 72 HOH HOH . J 9 HOH A 222 622 114 HOH HOH . J 9 HOH A 223 623 183 HOH HOH . J 9 HOH A 224 624 104 HOH HOH . J 9 HOH A 225 625 239 HOH HOH . J 9 HOH A 226 626 211 HOH HOH . J 9 HOH A 227 627 97 HOH HOH . J 9 HOH A 228 628 218 HOH HOH . J 9 HOH A 229 629 246 HOH HOH . J 9 HOH A 230 630 220 HOH HOH . J 9 HOH A 231 631 204 HOH HOH . J 9 HOH A 232 632 214 HOH HOH . J 9 HOH A 233 633 98 HOH HOH . J 9 HOH A 234 634 240 HOH HOH . J 9 HOH A 235 635 219 HOH HOH . J 9 HOH A 236 636 244 HOH HOH . J 9 HOH A 237 637 61 HOH HOH . J 9 HOH A 238 638 208 HOH HOH . J 9 HOH A 239 639 216 HOH HOH . J 9 HOH A 240 640 164 HOH HOH . J 9 HOH A 241 641 215 HOH HOH . J 9 HOH A 242 642 180 HOH HOH . J 9 HOH A 243 643 221 HOH HOH . J 9 HOH A 244 644 206 HOH HOH . J 9 HOH A 245 645 207 HOH HOH . J 9 HOH A 246 646 223 HOH HOH . J 9 HOH A 247 647 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 4 -4.991 12.363 12.825 1 20.14 ? S SO4 304 A 1 HETATM 2 O O1 SO4 . . . E 4 -5.397 11.288 11.892 1 31.63 ? O1 SO4 304 A 1 HETATM 3 O O2 SO4 . . . E 4 -4.511 13.462 12.171 1 27.01 ? O2 SO4 304 A 1 HETATM 4 O O3 SO4 . . . E 4 -3.967 11.875 13.792 1 31.76 ? O3 SO4 304 A 1 HETATM 5 O O4 SO4 . . . E 4 -6.149 12.651 13.791 1 33.44 ? O4 SO4 304 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #