data_5PAL # _model_server_result.job_id 98RNr8uhqGb16r5SQINfeQ _model_server_result.datetime_utc '2024-11-14 11:10:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5pal # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":110}' # _entry.id 5PAL # _exptl.entry_id 5PAL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5PAL _cell.length_a 32.12 _cell.length_b 32.12 _cell.length_c 149 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5PAL _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 51 A ASP 51 1_555 C CA CA . A CA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc2 A OD1 ASP 53 A ASP 53 1_555 C CA CA . A CA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc3 A OG SER 55 A SER 55 1_555 C CA CA . A CA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc4 A O PHE 57 A PHE 57 1_555 C CA CA . A CA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc5 A OE1 GLU 59 A GLU 59 1_555 C CA CA . A CA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc6 A OE2 GLU 62 A GLU 62 1_555 C CA CA . A CA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc7 A OE1 GLU 62 A GLU 62 1_555 C CA CA . A CA 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc8 A OD1 ASP 90 A ASP 90 1_555 B CA CA . A CA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc9 A OD1 ASP 92 A ASP 92 1_555 B CA CA . A CA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc10 A OD1 ASP 94 A ASP 94 1_555 B CA CA . A CA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc11 A O LYS 96 A LYS 96 1_555 B CA CA . A CA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc12 A OE1 GLU 101 A GLU 101 1_555 B CA CA . A CA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc13 A OE2 GLU 101 A GLU 101 1_555 B CA CA . A CA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc14 B CA CA . A CA 110 1_555 D O HOH . A HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5PAL _atom_sites.fract_transf_matrix[1][1] 0.031133 _atom_sites.fract_transf_matrix[1][2] 0.017975 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.03595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006711 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 110 110 CA CA . C 2 CA A 1 111 111 CA CA . D 3 HOH A 1 201 201 HOH HOH . D 3 HOH A 2 202 202 HOH HOH . D 3 HOH A 3 203 203 HOH HOH . D 3 HOH A 4 204 204 HOH HOH . D 3 HOH A 5 205 205 HOH HOH . D 3 HOH A 6 206 206 HOH HOH . D 3 HOH A 7 207 207 HOH HOH . D 3 HOH A 8 208 208 HOH HOH . D 3 HOH A 9 209 209 HOH HOH . D 3 HOH A 10 210 210 HOH HOH . D 3 HOH A 11 211 211 HOH HOH . D 3 HOH A 12 212 212 HOH HOH . D 3 HOH A 13 213 213 HOH HOH . D 3 HOH A 14 214 214 HOH HOH . D 3 HOH A 15 215 215 HOH HOH . D 3 HOH A 16 216 216 HOH HOH . D 3 HOH A 17 217 217 HOH HOH . D 3 HOH A 18 218 218 HOH HOH . D 3 HOH A 19 219 219 HOH HOH . D 3 HOH A 20 220 220 HOH HOH . D 3 HOH A 21 221 221 HOH HOH . D 3 HOH A 22 222 222 HOH HOH . D 3 HOH A 23 223 223 HOH HOH . D 3 HOH A 24 224 224 HOH HOH . D 3 HOH A 25 225 225 HOH HOH . D 3 HOH A 26 226 226 HOH HOH . D 3 HOH A 27 227 227 HOH HOH . D 3 HOH A 28 228 228 HOH HOH . D 3 HOH A 29 229 229 HOH HOH . D 3 HOH A 30 230 230 HOH HOH . D 3 HOH A 31 231 231 HOH HOH . D 3 HOH A 32 232 232 HOH HOH . D 3 HOH A 33 233 233 HOH HOH . D 3 HOH A 34 234 234 HOH HOH . D 3 HOH A 35 235 235 HOH HOH . D 3 HOH A 36 236 236 HOH HOH . D 3 HOH A 37 237 237 HOH HOH . D 3 HOH A 38 238 238 HOH HOH . D 3 HOH A 39 239 239 HOH HOH . D 3 HOH A 40 240 240 HOH HOH . D 3 HOH A 41 241 241 HOH HOH . D 3 HOH A 42 242 242 HOH HOH . D 3 HOH A 43 243 243 HOH HOH . D 3 HOH A 44 244 244 HOH HOH . D 3 HOH A 45 245 245 HOH HOH . D 3 HOH A 46 246 246 HOH HOH . D 3 HOH A 47 247 247 HOH HOH . D 3 HOH A 48 248 248 HOH HOH . D 3 HOH A 49 249 249 HOH HOH . D 3 HOH A 50 250 250 HOH HOH . D 3 HOH A 51 251 251 HOH HOH . D 3 HOH A 52 252 252 HOH HOH . D 3 HOH A 53 253 253 HOH HOH . D 3 HOH A 54 254 254 HOH HOH . D 3 HOH A 55 255 255 HOH HOH . D 3 HOH A 56 256 256 HOH HOH . D 3 HOH A 57 257 257 HOH HOH . D 3 HOH A 58 258 258 HOH HOH . D 3 HOH A 59 259 259 HOH HOH . D 3 HOH A 60 260 260 HOH HOH . D 3 HOH A 61 261 261 HOH HOH . D 3 HOH A 62 262 262 HOH HOH . D 3 HOH A 63 263 263 HOH HOH . D 3 HOH A 64 264 264 HOH HOH . D 3 HOH A 65 265 265 HOH HOH . D 3 HOH A 66 266 266 HOH HOH . D 3 HOH A 67 267 267 HOH HOH . D 3 HOH A 68 268 268 HOH HOH . D 3 HOH A 69 269 269 HOH HOH . D 3 HOH A 70 270 270 HOH HOH . D 3 HOH A 71 271 271 HOH HOH . D 3 HOH A 72 272 272 HOH HOH . D 3 HOH A 73 273 273 HOH HOH . D 3 HOH A 74 274 274 HOH HOH . D 3 HOH A 75 275 275 HOH HOH . D 3 HOH A 76 276 276 HOH HOH . D 3 HOH A 77 277 277 HOH HOH . D 3 HOH A 78 278 278 HOH HOH . D 3 HOH A 79 279 279 HOH HOH . D 3 HOH A 80 281 281 HOH HOH . D 3 HOH A 81 282 282 HOH HOH . D 3 HOH A 82 283 283 HOH HOH . D 3 HOH A 83 285 285 HOH HOH . D 3 HOH A 84 287 287 HOH HOH . D 3 HOH A 85 288 288 HOH HOH . D 3 HOH A 86 289 289 HOH HOH . D 3 HOH A 87 291 291 HOH HOH . D 3 HOH A 88 292 292 HOH HOH . D 3 HOH A 89 293 293 HOH HOH . D 3 HOH A 90 294 294 HOH HOH . D 3 HOH A 91 297 297 HOH HOH . D 3 HOH A 92 298 298 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -8.485 _atom_site.Cartn_y 18.639 _atom_site.Cartn_z 1.916 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 110 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #