data_5PGZ # _model_server_result.job_id MfWyAsczS6hulOhtpT8zvg _model_server_result.datetime_utc '2024-12-22 07:03:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5pgz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 5PGZ # _exptl.entry_id 5PGZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5PGZ _cell.length_a 96.6 _cell.length_b 96.6 _cell.length_c 217.4 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5PGZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 J N N ? 4 K N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 426 n n S O2 SO4 doub 427 n n S O3 SO4 sing 428 n n S O4 SO4 sing 429 n n # _atom_sites.entry_id 5PGZ _atom_sites.fract_transf_matrix[1][1] 0.010352 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010352 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 301 301 NAP NAP . D 3 8KG A 1 302 302 8KG LG1 . E 4 SO4 A 1 303 1 SO4 SO4 . F 4 SO4 A 1 304 3 SO4 SO4 . G 4 SO4 A 1 305 5 SO4 SO4 . H 2 NAP B 1 301 301 NAP NAP . I 3 8KG B 1 302 302 8KG LG1 . J 4 SO4 B 1 303 2 SO4 SO4 . K 4 SO4 B 1 304 4 SO4 SO4 . L 5 HOH A 1 401 13 HOH HOH . L 5 HOH A 2 402 15 HOH HOH . L 5 HOH A 3 403 27 HOH HOH . L 5 HOH A 4 404 10 HOH HOH . L 5 HOH A 5 405 18 HOH HOH . L 5 HOH A 6 406 5 HOH HOH . L 5 HOH A 7 407 11 HOH HOH . L 5 HOH A 8 408 12 HOH HOH . L 5 HOH A 9 409 17 HOH HOH . L 5 HOH A 10 410 21 HOH HOH . L 5 HOH A 11 411 4 HOH HOH . L 5 HOH A 12 412 16 HOH HOH . L 5 HOH A 13 413 26 HOH HOH . L 5 HOH A 14 414 14 HOH HOH . M 5 HOH B 1 401 19 HOH HOH . M 5 HOH B 2 402 30 HOH HOH . M 5 HOH B 3 403 28 HOH HOH . M 5 HOH B 4 404 29 HOH HOH . M 5 HOH B 5 405 2 HOH HOH . M 5 HOH B 6 406 9 HOH HOH . M 5 HOH B 7 407 23 HOH HOH . M 5 HOH B 8 408 24 HOH HOH . M 5 HOH B 9 409 6 HOH HOH . M 5 HOH B 10 410 7 HOH HOH . M 5 HOH B 11 411 22 HOH HOH . M 5 HOH B 12 412 1 HOH HOH . M 5 HOH B 13 413 8 HOH HOH . M 5 HOH B 14 414 3 HOH HOH . M 5 HOH B 15 415 25 HOH HOH . M 5 HOH B 16 416 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 4 87.712 44.84 46.306 1 50.35 ? S SO4 303 A 1 HETATM 2 O O1 SO4 . . . E 4 88.408 44.319 45.142 1 51.6 ? O1 SO4 303 A 1 HETATM 3 O O2 SO4 . . . E 4 86.317 44.474 46.214 1 50.82 ? O2 SO4 303 A 1 HETATM 4 O O3 SO4 . . . E 4 87.888 46.301 46.39 1 48.29 ? O3 SO4 303 A 1 HETATM 5 O O4 SO4 . . . E 4 88.248 44.191 47.494 1 53.85 ? O4 SO4 303 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #