data_5PNT # _model_server_result.job_id nF8hi3Fkx_w7MQDvgqk0pw _model_server_result.datetime_utc '2024-11-16 15:57:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5pnt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":0}' # _entry.id 5PNT # _exptl.entry_id 5PNT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5PNT _cell.length_a 34.1 _cell.length_b 56.6 _cell.length_c 97.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5PNT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 218 n n O1 C6 MES sing 219 n n C2 C3 MES sing 220 n n C2 H21 MES sing 221 n n C2 H22 MES sing 222 n n C3 N4 MES sing 223 n n C3 H31 MES sing 224 n n C3 H32 MES sing 225 n n N4 C5 MES sing 226 n n N4 C7 MES sing 227 n n N4 HN4 MES sing 228 n n C5 C6 MES sing 229 n n C5 H51 MES sing 230 n n C5 H52 MES sing 231 n n C6 H61 MES sing 232 n n C6 H62 MES sing 233 n n C7 C8 MES sing 234 n n C7 H71 MES sing 235 n n C7 H72 MES sing 236 n n C8 S MES sing 237 n n C8 H81 MES sing 238 n n C8 H82 MES sing 239 n n S O1S MES doub 240 n n S O2S MES doub 241 n n S O3S MES sing 242 n n # _atom_sites.entry_id 5PNT _atom_sites.fract_transf_matrix[1][1] 0.029326 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017668 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010277 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MES A 1 0 0 MES MES . C 3 HOH A 1 158 1 HOH HOH . C 3 HOH A 2 159 2 HOH HOH . C 3 HOH A 3 160 3 HOH HOH . C 3 HOH A 4 161 4 HOH HOH . C 3 HOH A 5 162 5 HOH HOH . C 3 HOH A 6 163 6 HOH HOH . C 3 HOH A 7 164 7 HOH HOH . C 3 HOH A 8 165 8 HOH HOH . C 3 HOH A 9 166 10 HOH HOH . C 3 HOH A 10 167 11 HOH HOH . C 3 HOH A 11 168 12 HOH HOH . C 3 HOH A 12 169 13 HOH HOH . C 3 HOH A 13 170 14 HOH HOH . C 3 HOH A 14 171 15 HOH HOH . C 3 HOH A 15 172 16 HOH HOH . C 3 HOH A 16 173 17 HOH HOH . C 3 HOH A 17 174 18 HOH HOH . C 3 HOH A 18 175 19 HOH HOH . C 3 HOH A 19 176 20 HOH HOH . C 3 HOH A 20 177 21 HOH HOH . C 3 HOH A 21 178 23 HOH HOH . C 3 HOH A 22 179 24 HOH HOH . C 3 HOH A 23 180 25 HOH HOH . C 3 HOH A 24 181 26 HOH HOH . C 3 HOH A 25 182 27 HOH HOH . C 3 HOH A 26 183 28 HOH HOH . C 3 HOH A 27 184 29 HOH HOH . C 3 HOH A 28 185 30 HOH HOH . C 3 HOH A 29 186 31 HOH HOH . C 3 HOH A 30 187 33 HOH HOH . C 3 HOH A 31 188 34 HOH HOH . C 3 HOH A 32 189 35 HOH HOH . C 3 HOH A 33 190 37 HOH HOH . C 3 HOH A 34 191 38 HOH HOH . C 3 HOH A 35 192 39 HOH HOH . C 3 HOH A 36 193 40 HOH HOH . C 3 HOH A 37 194 41 HOH HOH . C 3 HOH A 38 195 42 HOH HOH . C 3 HOH A 39 196 44 HOH HOH . C 3 HOH A 40 197 45 HOH HOH . C 3 HOH A 41 198 46 HOH HOH . C 3 HOH A 42 199 47 HOH HOH . C 3 HOH A 43 200 48 HOH HOH . C 3 HOH A 44 201 49 HOH HOH . C 3 HOH A 45 202 50 HOH HOH . C 3 HOH A 46 203 52 HOH HOH . C 3 HOH A 47 204 54 HOH HOH . C 3 HOH A 48 205 55 HOH HOH . C 3 HOH A 49 206 56 HOH HOH . C 3 HOH A 50 207 57 HOH HOH . C 3 HOH A 51 208 58 HOH HOH . C 3 HOH A 52 209 59 HOH HOH . C 3 HOH A 53 210 61 HOH HOH . C 3 HOH A 54 211 62 HOH HOH . C 3 HOH A 55 212 64 HOH HOH . C 3 HOH A 56 213 65 HOH HOH . C 3 HOH A 57 214 66 HOH HOH . C 3 HOH A 58 215 67 HOH HOH . C 3 HOH A 59 216 68 HOH HOH . C 3 HOH A 60 217 69 HOH HOH . C 3 HOH A 61 218 71 HOH HOH . C 3 HOH A 62 219 73 HOH HOH . C 3 HOH A 63 220 74 HOH HOH . C 3 HOH A 64 221 76 HOH HOH . C 3 HOH A 65 222 77 HOH HOH . C 3 HOH A 66 223 78 HOH HOH . C 3 HOH A 67 224 79 HOH HOH . C 3 HOH A 68 225 81 HOH HOH . C 3 HOH A 69 226 82 HOH HOH . C 3 HOH A 70 227 83 HOH HOH . C 3 HOH A 71 228 84 HOH HOH . C 3 HOH A 72 229 85 HOH HOH . C 3 HOH A 73 230 86 HOH HOH . C 3 HOH A 74 231 87 HOH HOH . C 3 HOH A 75 232 88 HOH HOH . C 3 HOH A 76 233 90 HOH HOH . C 3 HOH A 77 234 91 HOH HOH . C 3 HOH A 78 235 92 HOH HOH . C 3 HOH A 79 236 93 HOH HOH . C 3 HOH A 80 237 94 HOH HOH . C 3 HOH A 81 238 95 HOH HOH . C 3 HOH A 82 239 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . B 2 3.053 14.086 -3.179 1 38.34 ? O1 MES 0 A 1 HETATM 2 C C2 MES . . . B 2 3.856 14.146 -2.004 1 36.05 ? C2 MES 0 A 1 HETATM 3 C C3 MES . . . B 2 3.94 12.847 -1.279 1 32.13 ? C3 MES 0 A 1 HETATM 4 N N4 MES . . . B 2 2.542 12.367 -0.955 1 28.25 ? N4 MES 0 A 1 HETATM 5 C C5 MES . . . B 2 1.704 12.417 -2.119 1 34.79 ? C5 MES 0 A 1 HETATM 6 C C6 MES . . . B 2 1.739 13.827 -2.842 1 37.54 ? C6 MES 0 A 1 HETATM 7 C C7 MES . . . B 2 2.497 10.928 -0.453 1 26.91 ? C7 MES 0 A 1 HETATM 8 C C8 MES . . . B 2 3.547 10.759 0.615 1 25.86 ? C8 MES 0 A 1 HETATM 9 S S MES . . . B 2 3.037 9.6 1.866 1 21.92 ? S MES 0 A 1 HETATM 10 O O1S MES . . . B 2 1.759 10.054 2.301 1 21.72 ? O1S MES 0 A 1 HETATM 11 O O2S MES . . . B 2 4.103 9.721 2.875 1 27.87 ? O2S MES 0 A 1 HETATM 12 O O3S MES . . . B 2 3.004 8.257 1.325 1 20.04 ? O3S MES 0 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 12 #