data_5Q0E
#
_model_server_result.job_id            MrG2UOwibNkLx6EiCS1nGQ 
_model_server_result.datetime_utc      '2025-01-16 05:49:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5q0e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":316}' 
#
_entry.id    5Q0E 
#
_exptl.entry_id    5Q0E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    15 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5Q0E 
_cell.length_a            78.8 
_cell.length_b            78.8 
_cell.length_c            106 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5Q0E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 29 A CYS 42 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf3 A SG CYS 158 A CYS 168 1_555 A SG CYS 173 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf4 A SG CYS 184 A CYS 191 1_555 A SG CYS 212 A CYS 219 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 160 n n 
C1 C2 EDO sing 161 n n 
C1 H11 EDO sing 162 n n 
C1 H12 EDO sing 163 n n 
O1 HO1 EDO sing 164 n n 
C2 O2 EDO sing 165 n n 
C2 H21 EDO sing 166 n n 
C2 H22 EDO sing 167 n n 
O2 HO2 EDO sing 168 n n 
#
_atom_sites.entry_id                     5Q0E 
_atom_sites.fract_transf_matrix[1][1]    0.01269 
_atom_sites.fract_transf_matrix[1][2]    0.007327 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014654 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009434 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 9FD A 1 301 1 9FD LG1 . 
C 3 SO4 A 1 302 1 SO4 SO4 . 
D 3 SO4 A 1 303 2 SO4 SO4 . 
E 4 EDO A 1 304 3 EDO EDO . 
F 4 EDO A 1 305 4 EDO EDO . 
G 4 EDO A 1 306 7 EDO EDO . 
H 4 EDO A 1 307 9 EDO EDO . 
I 4 EDO A 1 308 10 EDO EDO . 
J 4 EDO A 1 309 11 EDO EDO . 
K 4 EDO A 1 310 13 EDO EDO . 
L 4 EDO A 1 311 14 EDO EDO . 
M 4 EDO A 1 312 15 EDO EDO . 
N 4 EDO A 1 313 16 EDO EDO . 
O 4 EDO A 1 314 17 EDO EDO . 
P 4 EDO A 1 315 18 EDO EDO . 
Q 4 EDO A 1 316 19 EDO EDO . 
R 4 EDO A 1 317 20 EDO EDO . 
S 4 EDO A 1 318 21 EDO EDO . 
T 5 HOH A 1 401 84 HOH HOH . 
T 5 HOH A 2 402 27 HOH HOH . 
T 5 HOH A 3 403 114 HOH HOH . 
T 5 HOH A 4 404 86 HOH HOH . 
T 5 HOH A 5 405 57 HOH HOH . 
T 5 HOH A 6 406 121 HOH HOH . 
T 5 HOH A 7 407 21 HOH HOH . 
T 5 HOH A 8 408 162 HOH HOH . 
T 5 HOH A 9 409 153 HOH HOH . 
T 5 HOH A 10 410 54 HOH HOH . 
T 5 HOH A 11 411 106 HOH HOH . 
T 5 HOH A 12 412 151 HOH HOH . 
T 5 HOH A 13 413 49 HOH HOH . 
T 5 HOH A 14 414 113 HOH HOH . 
T 5 HOH A 15 415 152 HOH HOH . 
T 5 HOH A 16 416 81 HOH HOH . 
T 5 HOH A 17 417 155 HOH HOH . 
T 5 HOH A 18 418 35 HOH HOH . 
T 5 HOH A 19 419 85 HOH HOH . 
T 5 HOH A 20 420 10 HOH HOH . 
T 5 HOH A 21 421 15 HOH HOH . 
T 5 HOH A 22 422 30 HOH HOH . 
T 5 HOH A 23 423 142 HOH HOH . 
T 5 HOH A 24 424 58 HOH HOH . 
T 5 HOH A 25 425 68 HOH HOH . 
T 5 HOH A 26 426 29 HOH HOH . 
T 5 HOH A 27 427 43 HOH HOH . 
T 5 HOH A 28 428 83 HOH HOH . 
T 5 HOH A 29 429 20 HOH HOH . 
T 5 HOH A 30 430 7 HOH HOH . 
T 5 HOH A 31 431 26 HOH HOH . 
T 5 HOH A 32 432 182 HOH HOH . 
T 5 HOH A 33 433 70 HOH HOH . 
T 5 HOH A 34 434 65 HOH HOH . 
T 5 HOH A 35 435 129 HOH HOH . 
T 5 HOH A 36 436 130 HOH HOH . 
T 5 HOH A 37 437 87 HOH HOH . 
T 5 HOH A 38 438 9 HOH HOH . 
T 5 HOH A 39 439 25 HOH HOH . 
T 5 HOH A 40 440 37 HOH HOH . 
T 5 HOH A 41 441 42 HOH HOH . 
T 5 HOH A 42 442 97 HOH HOH . 
T 5 HOH A 43 443 118 HOH HOH . 
T 5 HOH A 44 444 17 HOH HOH . 
T 5 HOH A 45 445 89 HOH HOH . 
T 5 HOH A 46 446 39 HOH HOH . 
T 5 HOH A 47 447 154 HOH HOH . 
T 5 HOH A 48 448 185 HOH HOH . 
T 5 HOH A 49 449 96 HOH HOH . 
T 5 HOH A 50 450 2 HOH HOH . 
T 5 HOH A 51 451 180 HOH HOH . 
T 5 HOH A 52 452 6 HOH HOH . 
T 5 HOH A 53 453 82 HOH HOH . 
T 5 HOH A 54 454 63 HOH HOH . 
T 5 HOH A 55 455 181 HOH HOH . 
T 5 HOH A 56 456 31 HOH HOH . 
T 5 HOH A 57 457 171 HOH HOH . 
T 5 HOH A 58 458 102 HOH HOH . 
T 5 HOH A 59 459 91 HOH HOH . 
T 5 HOH A 60 460 53 HOH HOH . 
T 5 HOH A 61 461 19 HOH HOH . 
T 5 HOH A 62 462 189 HOH HOH . 
T 5 HOH A 63 463 108 HOH HOH . 
T 5 HOH A 64 464 128 HOH HOH . 
T 5 HOH A 65 465 146 HOH HOH . 
T 5 HOH A 66 466 73 HOH HOH . 
T 5 HOH A 67 467 150 HOH HOH . 
T 5 HOH A 68 468 140 HOH HOH . 
T 5 HOH A 69 469 104 HOH HOH . 
T 5 HOH A 70 470 23 HOH HOH . 
T 5 HOH A 71 471 122 HOH HOH . 
T 5 HOH A 72 472 175 HOH HOH . 
T 5 HOH A 73 473 137 HOH HOH . 
T 5 HOH A 74 474 117 HOH HOH . 
T 5 HOH A 75 475 55 HOH HOH . 
T 5 HOH A 76 476 13 HOH HOH . 
T 5 HOH A 77 477 3 HOH HOH . 
T 5 HOH A 78 478 72 HOH HOH . 
T 5 HOH A 79 479 191 HOH HOH . 
T 5 HOH A 80 480 61 HOH HOH . 
T 5 HOH A 81 481 88 HOH HOH . 
T 5 HOH A 82 482 69 HOH HOH . 
T 5 HOH A 83 483 187 HOH HOH . 
T 5 HOH A 84 484 5 HOH HOH . 
T 5 HOH A 85 485 161 HOH HOH . 
T 5 HOH A 86 486 79 HOH HOH . 
T 5 HOH A 87 487 14 HOH HOH . 
T 5 HOH A 88 488 28 HOH HOH . 
T 5 HOH A 89 489 115 HOH HOH . 
T 5 HOH A 90 490 45 HOH HOH . 
T 5 HOH A 91 491 34 HOH HOH . 
T 5 HOH A 92 492 163 HOH HOH . 
T 5 HOH A 93 493 4 HOH HOH . 
T 5 HOH A 94 494 139 HOH HOH . 
T 5 HOH A 95 495 188 HOH HOH . 
T 5 HOH A 96 496 112 HOH HOH . 
T 5 HOH A 97 497 167 HOH HOH . 
T 5 HOH A 98 498 176 HOH HOH . 
T 5 HOH A 99 499 190 HOH HOH . 
T 5 HOH A 100 500 179 HOH HOH . 
T 5 HOH A 101 501 11 HOH HOH . 
T 5 HOH A 102 502 107 HOH HOH . 
T 5 HOH A 103 503 56 HOH HOH . 
T 5 HOH A 104 504 77 HOH HOH . 
T 5 HOH A 105 505 103 HOH HOH . 
T 5 HOH A 106 506 66 HOH HOH . 
T 5 HOH A 107 507 92 HOH HOH . 
T 5 HOH A 108 508 174 HOH HOH . 
T 5 HOH A 109 509 116 HOH HOH . 
T 5 HOH A 110 510 40 HOH HOH . 
T 5 HOH A 111 511 158 HOH HOH . 
T 5 HOH A 112 512 132 HOH HOH . 
T 5 HOH A 113 513 98 HOH HOH . 
T 5 HOH A 114 514 133 HOH HOH . 
T 5 HOH A 115 515 184 HOH HOH . 
T 5 HOH A 116 516 67 HOH HOH . 
T 5 HOH A 117 517 80 HOH HOH . 
T 5 HOH A 118 518 47 HOH HOH . 
T 5 HOH A 119 519 22 HOH HOH . 
T 5 HOH A 120 520 172 HOH HOH . 
T 5 HOH A 121 521 52 HOH HOH . 
T 5 HOH A 122 522 60 HOH HOH . 
T 5 HOH A 123 523 24 HOH HOH . 
T 5 HOH A 124 524 12 HOH HOH . 
T 5 HOH A 125 525 105 HOH HOH . 
T 5 HOH A 126 526 36 HOH HOH . 
T 5 HOH A 127 527 94 HOH HOH . 
T 5 HOH A 128 528 143 HOH HOH . 
T 5 HOH A 129 529 136 HOH HOH . 
T 5 HOH A 130 530 71 HOH HOH . 
T 5 HOH A 131 531 74 HOH HOH . 
T 5 HOH A 132 532 95 HOH HOH . 
T 5 HOH A 133 533 44 HOH HOH . 
T 5 HOH A 134 534 119 HOH HOH . 
T 5 HOH A 135 535 170 HOH HOH . 
T 5 HOH A 136 536 111 HOH HOH . 
T 5 HOH A 137 537 134 HOH HOH . 
T 5 HOH A 138 538 160 HOH HOH . 
T 5 HOH A 139 539 126 HOH HOH . 
T 5 HOH A 140 540 90 HOH HOH . 
T 5 HOH A 141 541 41 HOH HOH . 
T 5 HOH A 142 542 125 HOH HOH . 
T 5 HOH A 143 543 46 HOH HOH . 
T 5 HOH A 144 544 33 HOH HOH . 
T 5 HOH A 145 545 141 HOH HOH . 
T 5 HOH A 146 546 157 HOH HOH . 
T 5 HOH A 147 547 32 HOH HOH . 
T 5 HOH A 148 548 101 HOH HOH . 
T 5 HOH A 149 549 8 HOH HOH . 
T 5 HOH A 150 550 75 HOH HOH . 
T 5 HOH A 151 551 48 HOH HOH . 
T 5 HOH A 152 552 120 HOH HOH . 
T 5 HOH A 153 553 147 HOH HOH . 
T 5 HOH A 154 554 99 HOH HOH . 
T 5 HOH A 155 555 164 HOH HOH . 
T 5 HOH A 156 556 173 HOH HOH . 
T 5 HOH A 157 557 110 HOH HOH . 
T 5 HOH A 158 558 50 HOH HOH . 
T 5 HOH A 159 559 76 HOH HOH . 
T 5 HOH A 160 560 78 HOH HOH . 
T 5 HOH A 161 561 138 HOH HOH . 
T 5 HOH A 162 562 123 HOH HOH . 
T 5 HOH A 163 563 197 HOH HOH . 
T 5 HOH A 164 564 51 HOH HOH . 
T 5 HOH A 165 565 196 HOH HOH . 
T 5 HOH A 166 566 100 HOH HOH . 
T 5 HOH A 167 567 16 HOH HOH . 
T 5 HOH A 168 568 38 HOH HOH . 
T 5 HOH A 169 569 193 HOH HOH . 
T 5 HOH A 170 570 156 HOH HOH . 
T 5 HOH A 171 571 62 HOH HOH . 
T 5 HOH A 172 572 109 HOH HOH . 
T 5 HOH A 173 573 18 HOH HOH . 
T 5 HOH A 174 574 59 HOH HOH . 
T 5 HOH A 175 575 169 HOH HOH . 
T 5 HOH A 176 576 177 HOH HOH . 
T 5 HOH A 177 577 183 HOH HOH . 
T 5 HOH A 178 578 165 HOH HOH . 
T 5 HOH A 179 579 135 HOH HOH . 
T 5 HOH A 180 580 93 HOH HOH . 
T 5 HOH A 181 581 149 HOH HOH . 
T 5 HOH A 182 582 168 HOH HOH . 
T 5 HOH A 183 583 1 HOH HOH . 
T 5 HOH A 184 584 124 HOH HOH . 
T 5 HOH A 185 585 145 HOH HOH . 
T 5 HOH A 186 586 195 HOH HOH . 
T 5 HOH A 187 587 194 HOH HOH . 
T 5 HOH A 188 588 192 HOH HOH . 
T 5 HOH A 189 589 186 HOH HOH . 
T 5 HOH A 190 590 131 HOH HOH . 
T 5 HOH A 191 591 159 HOH HOH . 
T 5 HOH A 192 592 148 HOH HOH . 
T 5 HOH A 193 593 127 HOH HOH . 
T 5 HOH A 194 594 178 HOH HOH . 
T 5 HOH A 195 595 166 HOH HOH . 
T 5 HOH A 196 596 64 HOH HOH . 
T 5 HOH A 197 597 144 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . Q 4 42.21 -23.275 23.989 1 70.78 ? C1 EDO 316 A 1 
HETATM 2 O O1 EDO . . . Q 4 40.831 -23.415 24.282 1 71.59 ? O1 EDO 316 A 1 
HETATM 3 C C2 EDO . . . Q 4 43.041 -24.302 24.779 1 69.37 ? C2 EDO 316 A 1 
HETATM 4 O O2 EDO . . . Q 4 44.39 -23.872 24.774 1 69.33 ? O2 EDO 316 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#