data_5Q0M
#
_model_server_result.job_id            trl1xWwUKBut68w657cMwQ 
_model_server_result.datetime_utc      '2024-10-18 04:22:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5q0m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    5Q0M 
#
_exptl.entry_id    5Q0M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              539.703 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-{[(3beta,5beta,14beta,17alpha)-3-hydroxy-24-oxocholan-24-yl]amino}benzene-1,3-dicarboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5Q0M 
_cell.length_a            93.562 
_cell.length_b            93.562 
_cell.length_c            45.59 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5Q0M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C32 H45 N O6' 
_chem_comp.formula_weight    539.703 
_chem_comp.id                9L1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-{[(3beta,5beta,14beta,17alpha)-3-hydroxy-24-oxocholan-24-yl]amino}benzene-1,3-dicarboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O38 C36 9L1 sing 1 n n 
C36 C34 9L1 sing 2 n n 
C36 C33 9L1 sing 3 n n 
C34 C29 9L1 sing 4 n n 
C33 C28 9L1 sing 5 n n 
C29 C24 9L1 sing 6 n n 
C28 C26 9L1 sing 7 n n 
C28 C24 9L1 sing 8 n n 
C26 C19 9L1 sing 9 n n 
C24 C30 9L1 sing 10 n n 
C24 C18 9L1 sing 11 n n 
C19 C15 9L1 sing 12 n n 
C18 C15 9L1 sing 13 n n 
C18 C25 9L1 sing 14 n n 
C15 C14 9L1 sing 15 n n 
C25 C21 9L1 sing 16 n n 
C14 C17 9L1 sing 17 n n 
C14 C16 9L1 sing 18 n n 
C21 C16 9L1 sing 19 n n 
C17 C23 9L1 sing 20 n n 
C16 C20 9L1 sing 21 n n 
C16 C22 9L1 sing 22 n n 
C20 C23 9L1 sing 23 n n 
C20 C27 9L1 sing 24 n n 
C32 C27 9L1 sing 25 n n 
C27 C31 9L1 sing 26 n n 
C31 C35 9L1 sing 27 n n 
C35 C37 9L1 sing 28 n n 
O39 C37 9L1 doub 29 n n 
C37 N7 9L1 sing 30 n n 
N7 C3 9L1 sing 31 n n 
C3 C4 9L1 doub 32 n y 
C3 C2 9L1 sing 33 n y 
C4 C5 9L1 sing 34 n y 
O10 C8 9L1 doub 35 n n 
C2 C1 9L1 doub 36 n y 
C5 C8 9L1 sing 37 n n 
C5 C6 9L1 doub 38 n y 
C8 O9 9L1 sing 39 n n 
C1 C6 9L1 sing 40 n y 
C1 C11 9L1 sing 41 n n 
O12 C11 9L1 doub 42 n n 
C11 O13 9L1 sing 43 n n 
C4 H1 9L1 sing 44 n n 
C6 H2 9L1 sing 45 n n 
C15 H3 9L1 sing 46 n n 
C17 H4 9L1 sing 47 n n 
C17 H5 9L1 sing 48 n n 
C20 H6 9L1 sing 49 n n 
C21 H7 9L1 sing 50 n n 
C21 H8 9L1 sing 51 n n 
C22 H9 9L1 sing 52 n n 
C22 H10 9L1 sing 53 n n 
C22 H11 9L1 sing 54 n n 
C26 H12 9L1 sing 55 n n 
C26 H13 9L1 sing 56 n n 
C28 H14 9L1 sing 57 n n 
C14 H15 9L1 sing 58 n n 
C18 H16 9L1 sing 59 n n 
C19 H17 9L1 sing 60 n n 
C19 H18 9L1 sing 61 n n 
C2 H19 9L1 sing 62 n n 
C23 H20 9L1 sing 63 n n 
C23 H21 9L1 sing 64 n n 
C25 H22 9L1 sing 65 n n 
C25 H23 9L1 sing 66 n n 
C27 H24 9L1 sing 67 n n 
C29 H25 9L1 sing 68 n n 
C29 H26 9L1 sing 69 n n 
C30 H27 9L1 sing 70 n n 
C30 H28 9L1 sing 71 n n 
C30 H29 9L1 sing 72 n n 
C31 H30 9L1 sing 73 n n 
C31 H31 9L1 sing 74 n n 
C32 H32 9L1 sing 75 n n 
C32 H33 9L1 sing 76 n n 
C32 H34 9L1 sing 77 n n 
C33 H35 9L1 sing 78 n n 
C33 H36 9L1 sing 79 n n 
C34 H37 9L1 sing 80 n n 
C34 H38 9L1 sing 81 n n 
C35 H39 9L1 sing 82 n n 
C35 H40 9L1 sing 83 n n 
C36 H41 9L1 sing 84 n n 
N7 H42 9L1 sing 85 n n 
O13 H43 9L1 sing 86 n n 
O38 H44 9L1 sing 87 n n 
O9 H45 9L1 sing 88 n n 
#
_atom_sites.entry_id                     5Q0M 
_atom_sites.fract_transf_matrix[1][1]    0.010688 
_atom_sites.fract_transf_matrix[1][2]    0.006171 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012342 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021935 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 9L1 A 1 501 501 9L1 9L1 . 
D 4 HOH A 1 601 601 HOH HOH . 
D 4 HOH A 2 602 602 HOH HOH . 
D 4 HOH A 3 603 603 HOH HOH . 
D 4 HOH A 4 604 604 HOH HOH . 
D 4 HOH A 5 605 605 HOH HOH . 
D 4 HOH A 6 606 606 HOH HOH . 
D 4 HOH A 7 607 607 HOH HOH . 
D 4 HOH A 8 608 608 HOH HOH . 
D 4 HOH A 9 609 609 HOH HOH . 
D 4 HOH A 10 610 610 HOH HOH . 
D 4 HOH A 11 611 611 HOH HOH . 
D 4 HOH A 12 612 612 HOH HOH . 
D 4 HOH A 13 613 613 HOH HOH . 
D 4 HOH A 14 614 614 HOH HOH . 
D 4 HOH A 15 615 615 HOH HOH . 
D 4 HOH A 16 616 616 HOH HOH . 
D 4 HOH A 17 617 617 HOH HOH . 
D 4 HOH A 18 618 618 HOH HOH . 
D 4 HOH A 19 619 619 HOH HOH . 
D 4 HOH A 20 620 620 HOH HOH . 
D 4 HOH A 21 621 621 HOH HOH . 
D 4 HOH A 22 622 622 HOH HOH . 
D 4 HOH A 23 623 623 HOH HOH . 
D 4 HOH A 24 624 624 HOH HOH . 
D 4 HOH A 25 625 625 HOH HOH . 
D 4 HOH A 26 626 626 HOH HOH . 
D 4 HOH A 27 627 627 HOH HOH . 
D 4 HOH A 28 628 628 HOH HOH . 
D 4 HOH A 29 629 629 HOH HOH . 
D 4 HOH A 30 630 630 HOH HOH . 
D 4 HOH A 31 631 631 HOH HOH . 
D 4 HOH A 32 632 632 HOH HOH . 
D 4 HOH A 33 633 633 HOH HOH . 
D 4 HOH A 34 634 634 HOH HOH . 
D 4 HOH A 35 635 635 HOH HOH . 
D 4 HOH A 36 636 636 HOH HOH . 
D 4 HOH A 37 637 637 HOH HOH . 
D 4 HOH A 38 638 638 HOH HOH . 
E 4 HOH B 1 801 801 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 9L1 . . . C 3 -3.395 43.392 3.419 1 73.19 ? C4 9L1 501 A 1 
HETATM 2 C C5 9L1 . . . C 3 -2.229 43.535 4.169 1 78.81 ? C5 9L1 501 A 1 
HETATM 3 C C6 9L1 . . . C 3 -1.986 44.727 4.845 1 79.01 ? C6 9L1 501 A 1 
HETATM 4 C C8 9L1 . . . C 3 -1.241 42.42 4.25 1 87.34 ? C8 9L1 501 A 1 
HETATM 5 C C15 9L1 . . . C 3 -11.267 41.061 -4.651 1 46.64 ? C15 9L1 501 A 1 
HETATM 6 C C17 9L1 . . . C 3 -9.547 40.311 -2.836 1 49.88 ? C17 9L1 501 A 1 
HETATM 7 C C20 9L1 . . . C 3 -9.187 42.548 -1.937 1 45.83 ? C20 9L1 501 A 1 
HETATM 8 C C21 9L1 . . . C 3 -11.06 43.699 -3.393 1 41.37 ? C21 9L1 501 A 1 
HETATM 9 C C22 9L1 . . . C 3 -11.539 41.903 -1.772 1 25.54 ? C22 9L1 501 A 1 
HETATM 10 C C24 9L1 . . . C 3 -12.622 42.021 -6.606 1 46.79 ? C24 9L1 501 A 1 
HETATM 11 C C26 9L1 . . . C 3 -11.862 39.608 -6.655 1 52.5 ? C26 9L1 501 A 1 
HETATM 12 C C28 9L1 . . . C 3 -12.112 40.845 -7.48 1 55.06 ? C28 9L1 501 A 1 
HETATM 13 C C1 9L1 . . . C 3 -2.906 45.77 4.774 1 81.56 ? C1 9L1 501 A 1 
HETATM 14 C C11 9L1 . . . C 3 -2.652 47.053 5.484 1 84.16 ? C11 9L1 501 A 1 
HETATM 15 C C14 9L1 . . . C 3 -10.148 41.417 -3.701 1 45.71 ? C14 9L1 501 A 1 
HETATM 16 C C16 9L1 . . . C 3 -10.472 42.488 -2.731 1 37.76 ? C16 9L1 501 A 1 
HETATM 17 C C18 9L1 . . . C 3 -11.6 42.3 -5.468 1 40.93 ? C18 9L1 501 A 1 
HETATM 18 C C19 9L1 . . . C 3 -10.849 39.899 -5.556 1 47.34 ? C19 9L1 501 A 1 
HETATM 19 C C2 9L1 . . . C 3 -4.065 45.618 4.022 1 75.71 ? C2 9L1 501 A 1 
HETATM 20 C C23 9L1 . . . C 3 -8.788 41.073 -1.753 1 46.41 ? C23 9L1 501 A 1 
HETATM 21 C C25 9L1 . . . C 3 -12.018 43.429 -4.562 1 40.58 ? C25 9L1 501 A 1 
HETATM 22 C C27 9L1 . . . C 3 -9.092 43.33 -0.605 1 48.2 ? C27 9L1 501 A 1 
HETATM 23 C C29 9L1 . . . C 3 -12.786 43.252 -7.513 1 37.75 ? C29 9L1 501 A 1 
HETATM 24 C C3 9L1 . . . C 3 -4.316 44.436 3.345 1 69.99 ? C3 9L1 501 A 1 
HETATM 25 C C30 9L1 . . . C 3 -13.996 41.67 -6.019 1 40.74 ? C30 9L1 501 A 1 
HETATM 26 C C31 9L1 . . . C 3 -7.628 43.287 -0.122 1 45.06 ? C31 9L1 501 A 1 
HETATM 27 C C32 9L1 . . . C 3 -9.559 44.763 -0.699 1 61.99 ? C32 9L1 501 A 1 
HETATM 28 C C33 9L1 . . . C 3 -10.891 41.209 -8.317 1 53.55 ? C33 9L1 501 A 1 
HETATM 29 C C34 9L1 . . . C 3 -11.535 43.596 -8.32 1 51.35 ? C34 9L1 501 A 1 
HETATM 30 C C35 9L1 . . . C 3 -7.419 43.848 1.276 1 56.37 ? C35 9L1 501 A 1 
HETATM 31 C C36 9L1 . . . C 3 -11.121 42.427 -9.175 1 56.07 ? C36 9L1 501 A 1 
HETATM 32 C C37 9L1 . . . C 3 -6.095 43.456 1.882 1 69.45 ? C37 9L1 501 A 1 
HETATM 33 N N7 9L1 . . . C 3 -5.535 44.43 2.625 1 69.2 ? N7 9L1 501 A 1 
HETATM 34 O O10 9L1 . . . C 3 -1.536 41.364 3.54 1 91.23 ? O10 9L1 501 A 1 
HETATM 35 O O12 9L1 . . . C 3 -3.374 48.03 5.312 1 85.9 ? O12 9L1 501 A 1 
HETATM 36 O O13 9L1 . . . C 3 -1.631 47.039 6.306 1 85.05 ? O13 9L1 501 A 1 
HETATM 37 O O38 9L1 . . . C 3 -9.933 42.729 -9.915 1 48.46 ? O38 9L1 501 A 1 
HETATM 38 O O39 9L1 . . . C 3 -5.596 42.345 1.697 1 76.66 ? O39 9L1 501 A 1 
HETATM 39 O O9 9L1 . . . C 3 -0.232 42.503 4.94 1 91.72 ? O9 9L1 501 A 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           39 
#