data_5Q0R # _model_server_result.job_id LEl8HAjXqvbHNtcV9kz5lw _model_server_result.datetime_utc '2024-10-12 16:32:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5q0r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5Q0R # _exptl.entry_id 5Q0R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 503.588 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N,1-dibenzyl-6-[(2-fluorophenyl)sulfonyl]-4,5,6,7-tetrahydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5Q0R _cell.length_a 94.03 _cell.length_b 94.03 _cell.length_c 47.36 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Q0R _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H26 F N3 O3 S' _chem_comp.formula_weight 503.588 _chem_comp.id 9LG _chem_comp.mon_nstd_flag . _chem_comp.name N,1-dibenzyl-6-[(2-fluorophenyl)sulfonyl]-4,5,6,7-tetrahydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C30 C29 9LG doub 1 n y C30 C24 9LG sing 2 n y C29 C21 9LG sing 3 n y C24 C16 9LG doub 4 n y C21 C6 9LG doub 5 n y C16 C6 9LG sing 6 n y C16 F20 9LG sing 7 n n C6 S1 9LG sing 8 n n O12 S1 9LG doub 9 n n O11 S1 9LG doub 10 n n S1 N5 9LG sing 11 n n N5 C15 9LG sing 12 n n N5 C9 9LG sing 13 n n C15 C17 9LG sing 14 n n C9 C3 9LG sing 15 n n C17 C7 9LG sing 16 n n C3 C7 9LG doub 17 n y C3 N2 9LG sing 18 n y C7 C8 9LG sing 19 n y C26 C32 9LG doub 20 n y C26 C22 9LG sing 21 n y C32 C36 9LG sing 22 n y C13 N2 9LG sing 23 n n C13 C22 9LG sing 24 n n N2 C4 9LG sing 25 n y C22 C25 9LG doub 26 n y C8 C4 9LG doub 27 n y C36 C31 9LG doub 28 n y C4 C10 9LG sing 29 n n C25 C31 9LG sing 30 n y C10 O18 9LG doub 31 n n C10 N14 9LG sing 32 n n N14 C19 9LG sing 33 n n C19 C23 9LG sing 34 n n C27 C23 9LG doub 35 n y C27 C33 9LG sing 36 n y C23 C28 9LG sing 37 n y C33 C35 9LG doub 38 n y C28 C34 9LG doub 39 n y C35 C34 9LG sing 40 n y C8 H1 9LG sing 41 n n C13 H2 9LG sing 42 n n C13 H3 9LG sing 43 n n C15 H4 9LG sing 44 n n C15 H5 9LG sing 45 n n C17 H6 9LG sing 46 n n C17 H7 9LG sing 47 n n C21 H8 9LG sing 48 n n C24 H9 9LG sing 49 n n C26 H10 9LG sing 50 n n C28 H11 9LG sing 51 n n C30 H12 9LG sing 52 n n C29 H13 9LG sing 53 n n N14 H14 9LG sing 54 n n C19 H15 9LG sing 55 n n C19 H16 9LG sing 56 n n C27 H17 9LG sing 57 n n C33 H18 9LG sing 58 n n C35 H19 9LG sing 59 n n C34 H20 9LG sing 60 n n C25 H21 9LG sing 61 n n C31 H22 9LG sing 62 n n C36 H23 9LG sing 63 n n C32 H24 9LG sing 64 n n C9 H25 9LG sing 65 n n C9 H26 9LG sing 66 n n # _atom_sites.entry_id 5Q0R _atom_sites.fract_transf_matrix[1][1] 0.010635 _atom_sites.fract_transf_matrix[1][2] 0.00614 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01228 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021115 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 9LG A 1 501 501 9LG 9LG . D 4 HOH A 1 601 601 HOH HOH . D 4 HOH A 2 602 602 HOH HOH . D 4 HOH A 3 603 603 HOH HOH . D 4 HOH A 4 604 604 HOH HOH . D 4 HOH A 5 605 605 HOH HOH . D 4 HOH A 6 606 606 HOH HOH . D 4 HOH A 7 607 607 HOH HOH . D 4 HOH A 8 608 608 HOH HOH . D 4 HOH A 9 609 609 HOH HOH . D 4 HOH A 10 610 610 HOH HOH . D 4 HOH A 11 611 611 HOH HOH . D 4 HOH A 12 612 612 HOH HOH . D 4 HOH A 13 613 613 HOH HOH . D 4 HOH A 14 614 614 HOH HOH . D 4 HOH A 15 615 615 HOH HOH . D 4 HOH A 16 616 616 HOH HOH . D 4 HOH A 17 617 617 HOH HOH . D 4 HOH A 18 618 618 HOH HOH . D 4 HOH A 19 619 619 HOH HOH . D 4 HOH A 20 620 620 HOH HOH . D 4 HOH A 21 621 621 HOH HOH . D 4 HOH A 22 622 622 HOH HOH . D 4 HOH A 23 623 623 HOH HOH . D 4 HOH A 24 624 624 HOH HOH . D 4 HOH A 25 625 625 HOH HOH . D 4 HOH A 26 626 626 HOH HOH . D 4 HOH A 27 627 627 HOH HOH . D 4 HOH A 28 628 628 HOH HOH . D 4 HOH A 29 629 629 HOH HOH . D 4 HOH A 30 630 630 HOH HOH . D 4 HOH A 31 631 631 HOH HOH . D 4 HOH A 32 632 632 HOH HOH . D 4 HOH A 33 633 633 HOH HOH . D 4 HOH A 34 634 634 HOH HOH . D 4 HOH A 35 635 635 HOH HOH . D 4 HOH A 36 636 636 HOH HOH . D 4 HOH A 37 637 637 HOH HOH . D 4 HOH A 38 638 638 HOH HOH . D 4 HOH A 39 639 639 HOH HOH . D 4 HOH A 40 640 640 HOH HOH . D 4 HOH A 41 641 641 HOH HOH . D 4 HOH A 42 642 642 HOH HOH . D 4 HOH A 43 643 643 HOH HOH . D 4 HOH A 44 644 644 HOH HOH . D 4 HOH A 45 645 645 HOH HOH . D 4 HOH A 46 646 646 HOH HOH . D 4 HOH A 47 647 647 HOH HOH . D 4 HOH A 48 648 648 HOH HOH . D 4 HOH A 49 649 649 HOH HOH . D 4 HOH A 50 650 650 HOH HOH . D 4 HOH A 51 651 651 HOH HOH . D 4 HOH A 52 652 652 HOH HOH . D 4 HOH A 53 653 653 HOH HOH . D 4 HOH A 54 654 654 HOH HOH . D 4 HOH A 55 655 655 HOH HOH . D 4 HOH A 56 656 656 HOH HOH . D 4 HOH A 57 657 657 HOH HOH . D 4 HOH A 58 658 658 HOH HOH . D 4 HOH A 59 659 659 HOH HOH . D 4 HOH A 60 660 660 HOH HOH . D 4 HOH A 61 661 661 HOH HOH . D 4 HOH A 62 662 662 HOH HOH . D 4 HOH A 63 663 663 HOH HOH . D 4 HOH A 64 664 664 HOH HOH . D 4 HOH A 65 665 665 HOH HOH . D 4 HOH A 66 666 666 HOH HOH . D 4 HOH A 67 667 667 HOH HOH . D 4 HOH A 68 668 668 HOH HOH . D 4 HOH A 69 669 669 HOH HOH . D 4 HOH A 70 670 670 HOH HOH . D 4 HOH A 71 671 671 HOH HOH . D 4 HOH A 72 672 672 HOH HOH . D 4 HOH A 73 673 673 HOH HOH . D 4 HOH A 74 674 674 HOH HOH . D 4 HOH A 75 675 675 HOH HOH . D 4 HOH A 76 676 676 HOH HOH . D 4 HOH A 77 677 677 HOH HOH . D 4 HOH A 78 678 678 HOH HOH . D 4 HOH A 79 679 679 HOH HOH . D 4 HOH A 80 680 680 HOH HOH . D 4 HOH A 81 681 681 HOH HOH . D 4 HOH A 82 682 682 HOH HOH . D 4 HOH A 83 683 683 HOH HOH . D 4 HOH A 84 684 684 HOH HOH . D 4 HOH A 85 685 685 HOH HOH . D 4 HOH A 86 686 686 HOH HOH . D 4 HOH A 87 687 687 HOH HOH . D 4 HOH A 88 688 688 HOH HOH . D 4 HOH A 89 689 689 HOH HOH . D 4 HOH A 90 690 690 HOH HOH . D 4 HOH A 91 691 691 HOH HOH . D 4 HOH A 92 692 692 HOH HOH . D 4 HOH A 93 693 693 HOH HOH . D 4 HOH A 94 694 694 HOH HOH . D 4 HOH A 95 695 695 HOH HOH . D 4 HOH A 96 696 696 HOH HOH . D 4 HOH A 97 697 697 HOH HOH . D 4 HOH A 98 698 698 HOH HOH . D 4 HOH A 99 699 699 HOH HOH . D 4 HOH A 100 700 700 HOH HOH . D 4 HOH A 101 701 701 HOH HOH . E 4 HOH B 1 801 801 HOH HOH . E 4 HOH B 2 802 802 HOH HOH . E 4 HOH B 3 803 803 HOH HOH . E 4 HOH B 4 804 804 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 9LG . . . C 3 31.695 31.17 -0.411 1 40.18 ? C4 9LG 501 A 1 HETATM 2 C C6 9LG . . . C 3 31.751 31.067 -7.336 1 59.25 ? C6 9LG 501 A 1 HETATM 3 C C7 9LG . . . C 3 30.508 31.791 -2.234 1 44.02 ? C7 9LG 501 A 1 HETATM 4 C C8 9LG . . . C 3 30.675 32.013 -0.926 1 41.53 ? C8 9LG 501 A 1 HETATM 5 C C10 9LG . . . C 3 32.238 31.022 0.948 1 39.36 ? C10 9LG 501 A 1 HETATM 6 C C13 9LG . . . C 3 33.186 29.359 -1.552 1 39.19 ? C13 9LG 501 A 1 HETATM 7 C C15 9LG . . . C 3 30.135 32.259 -4.618 1 51.55 ? C15 9LG 501 A 1 HETATM 8 C C17 9LG . . . C 3 29.571 32.417 -3.221 1 48.47 ? C17 9LG 501 A 1 HETATM 9 C C21 9LG . . . C 3 32.696 30.2 -7.876 1 59.68 ? C21 9LG 501 A 1 HETATM 10 C C22 9LG . . . C 3 32.631 28.005 -1.193 1 40.13 ? C22 9LG 501 A 1 HETATM 11 C C24 9LG . . . C 3 33.004 32.962 -8.174 1 61.49 ? C24 9LG 501 A 1 HETATM 12 C C26 9LG . . . C 3 32.186 27.133 -2.182 1 37.18 ? C26 9LG 501 A 1 HETATM 13 C C28 9LG . . . C 3 33.282 32.111 5.104 1 45.05 ? C28 9LG 501 A 1 HETATM 14 F F20 9LG . . . C 3 31.014 33.287 -6.982 1 61.91 ? F20 9LG 501 A 1 HETATM 15 C C16 9LG . . . C 3 31.927 32.436 -7.5 1 61.39 ? C16 9LG 501 A 1 HETATM 16 C C30 9LG . . . C 3 33.94 32.088 -8.706 1 61.3 ? C30 9LG 501 A 1 HETATM 17 C C29 9LG . . . C 3 33.787 30.721 -8.56 1 60.33 ? C29 9LG 501 A 1 HETATM 18 S S1 9LG . . . C 3 30.372 30.354 -6.473 1 57.94 ? S1 9LG 501 A 1 HETATM 19 O O11 9LG . . . C 3 30.565 28.939 -6.49 1 58.97 ? O11 9LG 501 A 1 HETATM 20 O O12 9LG . . . C 3 29.177 30.911 -7.026 1 58.24 ? O12 9LG 501 A 1 HETATM 21 N N5 9LG . . . C 3 30.426 30.821 -4.901 1 52.28 ? N5 9LG 501 A 1 HETATM 22 O O18 9LG . . . C 3 33.394 30.662 1.155 1 41.17 ? O18 9LG 501 A 1 HETATM 23 N N14 9LG . . . C 3 31.371 31.305 1.935 1 41.85 ? N14 9LG 501 A 1 HETATM 24 C C19 9LG . . . C 3 31.712 31.208 3.36 1 44.22 ? C19 9LG 501 A 1 HETATM 25 C C23 9LG . . . C 3 32.449 32.355 4.014 1 45.22 ? C23 9LG 501 A 1 HETATM 26 C C27 9LG . . . C 3 32.315 33.665 3.562 1 45.79 ? C27 9LG 501 A 1 HETATM 27 C C33 9LG . . . C 3 33.002 34.705 4.18 1 44.56 ? C33 9LG 501 A 1 HETATM 28 C C35 9LG . . . C 3 33.828 34.451 5.26 1 44.9 ? C35 9LG 501 A 1 HETATM 29 C C34 9LG . . . C 3 33.971 33.154 5.724 1 45.04 ? C34 9LG 501 A 1 HETATM 30 N N2 9LG . . . C 3 32.161 30.398 -1.482 1 40.61 ? N2 9LG 501 A 1 HETATM 31 C C25 9LG . . . C 3 32.545 27.604 0.139 1 43.72 ? C25 9LG 501 A 1 HETATM 32 C C31 9LG . . . C 3 32.029 26.355 0.472 1 43.34 ? C31 9LG 501 A 1 HETATM 33 C C36 9LG . . . C 3 31.592 25.498 -0.518 1 40.98 ? C36 9LG 501 A 1 HETATM 34 C C32 9LG . . . C 3 31.672 25.888 -1.847 1 38.47 ? C32 9LG 501 A 1 HETATM 35 C C3 9LG . . . C 3 31.394 30.798 -2.654 1 43.29 ? C3 9LG 501 A 1 HETATM 36 C C9 9LG . . . C 3 31.521 30.266 -4.054 1 46.73 ? C9 9LG 501 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #