data_5Q0T # _model_server_result.job_id ROJ1dp7w4464CUk9ZdYWHw _model_server_result.datetime_utc '2024-11-25 21:01:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5q0t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5Q0T # _exptl.entry_id 5Q0T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 429.556 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-phenyl-N-(propan-2-yl)-6-[(thiophen-2-yl)sulfonyl]-4,5,6,7-tetrahydro-1H-pyrrolo[2,3-c]pyridine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5Q0T _cell.length_a 93.94 _cell.length_b 93.94 _cell.length_c 47.67 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Q0T _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H23 N3 O3 S2' _chem_comp.formula_weight 429.556 _chem_comp.id 9LM _chem_comp.mon_nstd_flag . _chem_comp.name 2-phenyl-N-(propan-2-yl)-6-[(thiophen-2-yl)sulfonyl]-4,5,6,7-tetrahydro-1H-pyrrolo[2,3-c]pyridine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C14 9LM doub 1 n y C13 C12 9LM sing 2 n y C14 C15 9LM sing 3 n y C12 C11 9LM doub 4 n y C15 C10 9LM doub 5 n y C11 C10 9LM sing 6 n y C10 C4 9LM sing 7 n n C29 C27 9LM sing 8 n n C28 C27 9LM sing 9 n n C27 N26 9LM sing 10 n n C4 C3 9LM doub 11 n y C4 N5 9LM sing 12 n y N26 C24 9LM sing 13 n n C3 C2 9LM sing 14 n y C24 N5 9LM sing 15 n n C24 O25 9LM doub 16 n n N5 C1 9LM sing 17 n y C2 C1 9LM doub 18 n y C2 C8 9LM sing 19 n n C1 C9 9LM sing 20 n n C8 C7 9LM sing 21 n n C9 N6 9LM sing 22 n n C7 N6 9LM sing 23 n n N6 S16 9LM sing 24 n n O17 S16 9LM doub 25 n n S16 O18 9LM doub 26 n n S16 C19 9LM sing 27 n n C19 C20 9LM doub 28 n y C19 S23 9LM sing 29 n y C20 C21 9LM sing 30 n y S23 C22 9LM sing 31 n y C21 C22 9LM doub 32 n y C7 H1 9LM sing 33 n n C7 H2 9LM sing 34 n n C8 H3 9LM sing 35 n n C8 H4 9LM sing 36 n n C13 H5 9LM sing 37 n n C15 H6 9LM sing 38 n n C20 H7 9LM sing 39 n n C21 H8 9LM sing 40 n n C22 H9 9LM sing 41 n n C28 H10 9LM sing 42 n n C28 H11 9LM sing 43 n n C28 H12 9LM sing 44 n n C27 H13 9LM sing 45 n n C29 H14 9LM sing 46 n n C29 H15 9LM sing 47 n n C29 H16 9LM sing 48 n n N26 H17 9LM sing 49 n n C9 H18 9LM sing 50 n n C9 H19 9LM sing 51 n n C3 H20 9LM sing 52 n n C11 H21 9LM sing 53 n n C12 H22 9LM sing 54 n n C14 H23 9LM sing 55 n n # _atom_sites.entry_id 5Q0T _atom_sites.fract_transf_matrix[1][1] 0.010645 _atom_sites.fract_transf_matrix[1][2] 0.006146 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012292 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020978 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 9LM A 1 501 501 9LM 9LM . D 4 HOH A 1 601 601 HOH HOH . D 4 HOH A 2 602 602 HOH HOH . D 4 HOH A 3 603 603 HOH HOH . D 4 HOH A 4 604 604 HOH HOH . D 4 HOH A 5 605 605 HOH HOH . D 4 HOH A 6 606 606 HOH HOH . D 4 HOH A 7 607 607 HOH HOH . D 4 HOH A 8 608 608 HOH HOH . D 4 HOH A 9 609 609 HOH HOH . D 4 HOH A 10 610 610 HOH HOH . D 4 HOH A 11 611 611 HOH HOH . D 4 HOH A 12 612 612 HOH HOH . D 4 HOH A 13 613 613 HOH HOH . D 4 HOH A 14 614 614 HOH HOH . D 4 HOH A 15 615 615 HOH HOH . D 4 HOH A 16 616 616 HOH HOH . D 4 HOH A 17 617 617 HOH HOH . D 4 HOH A 18 618 618 HOH HOH . D 4 HOH A 19 619 619 HOH HOH . D 4 HOH A 20 620 620 HOH HOH . D 4 HOH A 21 621 621 HOH HOH . D 4 HOH A 22 622 622 HOH HOH . D 4 HOH A 23 623 623 HOH HOH . D 4 HOH A 24 624 624 HOH HOH . D 4 HOH A 25 625 625 HOH HOH . D 4 HOH A 26 626 626 HOH HOH . D 4 HOH A 27 627 627 HOH HOH . D 4 HOH A 28 628 628 HOH HOH . D 4 HOH A 29 629 629 HOH HOH . D 4 HOH A 30 630 630 HOH HOH . D 4 HOH A 31 631 631 HOH HOH . D 4 HOH A 32 632 632 HOH HOH . D 4 HOH A 33 633 633 HOH HOH . D 4 HOH A 34 634 634 HOH HOH . D 4 HOH A 35 635 635 HOH HOH . D 4 HOH A 36 636 636 HOH HOH . D 4 HOH A 37 637 637 HOH HOH . D 4 HOH A 38 638 638 HOH HOH . E 4 HOH B 1 801 801 HOH HOH . E 4 HOH B 2 802 802 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 9LM . . . C 3 42.676 11.739 0.883 1 56.23 ? C4 9LM 501 A 1 HETATM 2 C C7 9LM . . . C 3 42.262 9.484 4.688 1 62.41 ? C7 9LM 501 A 1 HETATM 3 C C8 9LM . . . C 3 43.516 9.637 3.842 1 60.47 ? C8 9LM 501 A 1 HETATM 4 C C10 9LM . . . C 3 42.692 12.232 -0.514 1 53.67 ? C10 9LM 501 A 1 HETATM 5 C C13 9LM . . . C 3 42.731 13.104 -3.163 1 53.01 ? C13 9LM 501 A 1 HETATM 6 C C15 9LM . . . C 3 42.765 11.317 -1.562 1 55.08 ? C15 9LM 501 A 1 HETATM 7 C C20 9LM . . . C 3 41.816 13 8.239 1 61.39 ? C20 9LM 501 A 1 HETATM 8 C C21 9LM . . . C 3 42.837 13.601 9.009 1 63.34 ? C21 9LM 501 A 1 HETATM 9 C C22 9LM . . . C 3 43.946 12.862 9.126 1 67.05 ? C22 9LM 501 A 1 HETATM 10 C C24 9LM . . . C 3 40.945 13.43 1.881 1 56.6 ? C24 9LM 501 A 1 HETATM 11 C C28 9LM . . . C 3 39.635 15.642 0.113 1 45.86 ? C28 9LM 501 A 1 HETATM 12 C C27 9LM . . . C 3 38.992 14.427 0.748 1 47.83 ? C27 9LM 501 A 1 HETATM 13 C C29 9LM . . . C 3 37.844 13.907 -0.085 1 48.78 ? C29 9LM 501 A 1 HETATM 14 N N26 9LM . . . C 3 39.992 13.366 0.929 1 52.29 ? N26 9LM 501 A 1 HETATM 15 O O25 9LM . . . C 3 41.08 14.346 2.682 1 57.11 ? O25 9LM 501 A 1 HETATM 16 N N5 9LM . . . C 3 41.858 12.316 1.942 1 56.82 ? N5 9LM 501 A 1 HETATM 17 C C1 9LM . . . C 3 42.114 11.587 3.101 1 58 ? C1 9LM 501 A 1 HETATM 18 C C9 9LM . . . C 3 41.492 11.832 4.435 1 59.34 ? C9 9LM 501 A 1 HETATM 19 N N6 9LM . . . C 3 41.952 10.767 5.35 1 62.28 ? N6 9LM 501 A 1 HETATM 20 C C2 9LM . . . C 3 43.027 10.607 2.803 1 59.15 ? C2 9LM 501 A 1 HETATM 21 C C3 9LM . . . C 3 43.366 10.71 1.427 1 57.7 ? C3 9LM 501 A 1 HETATM 22 C C11 9LM . . . C 3 42.64 13.591 -0.816 1 52.81 ? C11 9LM 501 A 1 HETATM 23 C C12 9LM . . . C 3 42.657 14.019 -2.134 1 53.27 ? C12 9LM 501 A 1 HETATM 24 C C14 9LM . . . C 3 42.784 11.754 -2.877 1 55.63 ? C14 9LM 501 A 1 HETATM 25 S S16 9LM . . . C 3 41.269 10.719 6.815 1 63.28 ? S16 9LM 501 A 1 HETATM 26 O O17 9LM . . . C 3 39.969 11.295 6.694 1 61.02 ? O17 9LM 501 A 1 HETATM 27 O O18 9LM . . . C 3 41.406 9.385 7.307 1 65.67 ? O18 9LM 501 A 1 HETATM 28 C C19 9LM . . . C 3 42.227 11.774 7.796 1 66.26 ? C19 9LM 501 A 1 HETATM 29 S S23 9LM . . . C 3 43.816 11.376 8.303 1 72.9 ? S23 9LM 501 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #