data_5Q10 # _model_server_result.job_id UrPV-MMKk-qb6VxXjO7CAA _model_server_result.datetime_utc '2024-11-04 20:06:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5q10 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5Q10 # _exptl.entry_id 5Q10 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.067 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-(acetylamino)phenyl]-4-chloro-N-[(1S)-1-cyclohexyl-2-(cyclohexylamino)-2-oxoethyl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5Q10 _cell.length_a 93.957 _cell.length_b 93.957 _cell.length_c 48.02 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Q10 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H36 Cl N3 O3' _chem_comp.formula_weight 510.067 _chem_comp.id 9M4 _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-(acetylamino)phenyl]-4-chloro-N-[(1S)-1-cyclohexyl-2-(cyclohexylamino)-2-oxoethyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C23 9M4 sing 1 n n C22 C21 9M4 sing 2 n n C23 C24 9M4 sing 3 n n C21 C11 9M4 sing 4 n n C17 C16 9M4 sing 5 n n C17 C18 9M4 sing 6 n n C16 C15 9M4 sing 7 n n C24 C25 9M4 sing 8 n n C18 C19 9M4 sing 9 n n C11 C25 9M4 sing 10 n n C11 C10 9M4 sing 11 n n C15 N14 9M4 sing 12 n n C15 C20 9M4 sing 13 n n O13 C12 9M4 doub 14 n n N14 C12 9M4 sing 15 n n C12 C10 9M4 sing 16 n n C10 N9 9M4 sing 17 n n C19 C20 9M4 sing 18 n n O36 C34 9M4 doub 19 n n C35 C34 9M4 sing 20 n n C34 N33 9M4 sing 21 n n N9 C26 9M4 sing 22 n n N9 C1 9M4 sing 23 n n C27 C26 9M4 doub 24 n y C27 C28 9M4 sing 25 n y C26 C31 9M4 sing 26 n y N33 C28 9M4 sing 27 n n O32 C1 9M4 doub 28 n n C28 C29 9M4 doub 29 n y C1 C2 9M4 sing 30 n n C31 C30 9M4 doub 31 n y C29 C30 9M4 sing 32 n y C2 C7 9M4 doub 33 n y C2 C3 9M4 sing 34 n y C7 C6 9M4 sing 35 n y C3 C4 9M4 doub 36 n y C6 C5 9M4 doub 37 n y C4 C5 9M4 sing 38 n y C5 CL8 9M4 sing 39 n n C4 H1 9M4 sing 40 n n C6 H2 9M4 sing 41 n n C7 H3 9M4 sing 42 n n C10 H4 9M4 sing 43 n n C15 H5 9M4 sing 44 n n C17 H6 9M4 sing 45 n n C17 H7 9M4 sing 46 n n C20 H8 9M4 sing 47 n n C20 H9 9M4 sing 48 n n C21 H10 9M4 sing 49 n n C21 H11 9M4 sing 50 n n C22 H12 9M4 sing 51 n n C22 H13 9M4 sing 52 n n C24 H14 9M4 sing 53 n n C24 H15 9M4 sing 54 n n C3 H16 9M4 sing 55 n n C11 H17 9M4 sing 56 n n C23 H18 9M4 sing 57 n n C23 H19 9M4 sing 58 n n C25 H20 9M4 sing 59 n n C25 H21 9M4 sing 60 n n N14 H22 9M4 sing 61 n n C16 H23 9M4 sing 62 n n C16 H24 9M4 sing 63 n n C18 H25 9M4 sing 64 n n C18 H26 9M4 sing 65 n n C19 H27 9M4 sing 66 n n C19 H28 9M4 sing 67 n n C27 H29 9M4 sing 68 n n C29 H30 9M4 sing 69 n n C30 H31 9M4 sing 70 n n C31 H32 9M4 sing 71 n n N33 H33 9M4 sing 72 n n C35 H34 9M4 sing 73 n n C35 H35 9M4 sing 74 n n C35 H36 9M4 sing 75 n n # _atom_sites.entry_id 5Q10 _atom_sites.fract_transf_matrix[1][1] 0.010643 _atom_sites.fract_transf_matrix[1][2] 0.006145 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01229 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020825 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 9M4 A 1 501 501 9M4 9M4 . D 4 HOH A 1 601 601 HOH HOH . D 4 HOH A 2 602 602 HOH HOH . D 4 HOH A 3 603 603 HOH HOH . D 4 HOH A 4 604 604 HOH HOH . D 4 HOH A 5 605 605 HOH HOH . D 4 HOH A 6 606 606 HOH HOH . D 4 HOH A 7 607 607 HOH HOH . D 4 HOH A 8 608 608 HOH HOH . D 4 HOH A 9 609 609 HOH HOH . D 4 HOH A 10 610 610 HOH HOH . D 4 HOH A 11 611 611 HOH HOH . D 4 HOH A 12 612 612 HOH HOH . D 4 HOH A 13 613 613 HOH HOH . D 4 HOH A 14 614 614 HOH HOH . D 4 HOH A 15 615 615 HOH HOH . D 4 HOH A 16 616 616 HOH HOH . D 4 HOH A 17 617 617 HOH HOH . D 4 HOH A 18 618 618 HOH HOH . D 4 HOH A 19 619 619 HOH HOH . D 4 HOH A 20 620 620 HOH HOH . D 4 HOH A 21 621 621 HOH HOH . D 4 HOH A 22 622 622 HOH HOH . D 4 HOH A 23 623 623 HOH HOH . D 4 HOH A 24 624 624 HOH HOH . D 4 HOH A 25 625 625 HOH HOH . D 4 HOH A 26 626 626 HOH HOH . D 4 HOH A 27 627 627 HOH HOH . D 4 HOH A 28 628 628 HOH HOH . D 4 HOH A 29 629 629 HOH HOH . D 4 HOH A 30 630 630 HOH HOH . D 4 HOH A 31 631 631 HOH HOH . D 4 HOH A 32 632 632 HOH HOH . D 4 HOH A 33 633 633 HOH HOH . D 4 HOH A 34 634 634 HOH HOH . D 4 HOH A 35 635 635 HOH HOH . D 4 HOH A 36 636 636 HOH HOH . D 4 HOH A 37 637 637 HOH HOH . D 4 HOH A 38 638 638 HOH HOH . D 4 HOH A 39 639 639 HOH HOH . D 4 HOH A 40 640 640 HOH HOH . D 4 HOH A 41 641 641 HOH HOH . D 4 HOH A 42 642 642 HOH HOH . D 4 HOH A 43 643 643 HOH HOH . D 4 HOH A 44 644 644 HOH HOH . D 4 HOH A 45 645 645 HOH HOH . D 4 HOH A 46 646 646 HOH HOH . D 4 HOH A 47 647 647 HOH HOH . D 4 HOH A 48 648 648 HOH HOH . D 4 HOH A 49 649 649 HOH HOH . D 4 HOH A 50 650 650 HOH HOH . D 4 HOH A 51 651 651 HOH HOH . D 4 HOH A 52 652 652 HOH HOH . D 4 HOH A 53 653 653 HOH HOH . D 4 HOH A 54 654 654 HOH HOH . D 4 HOH A 55 655 655 HOH HOH . D 4 HOH A 56 656 656 HOH HOH . D 4 HOH A 57 657 657 HOH HOH . D 4 HOH A 58 658 658 HOH HOH . D 4 HOH A 59 659 659 HOH HOH . D 4 HOH A 60 660 660 HOH HOH . D 4 HOH A 61 661 661 HOH HOH . D 4 HOH A 62 662 662 HOH HOH . D 4 HOH A 63 663 663 HOH HOH . D 4 HOH A 64 664 664 HOH HOH . D 4 HOH A 65 665 665 HOH HOH . D 4 HOH A 66 666 666 HOH HOH . D 4 HOH A 67 667 667 HOH HOH . D 4 HOH A 68 668 668 HOH HOH . D 4 HOH A 69 669 669 HOH HOH . D 4 HOH A 70 670 670 HOH HOH . D 4 HOH A 71 671 671 HOH HOH . D 4 HOH A 72 672 672 HOH HOH . D 4 HOH A 73 673 673 HOH HOH . D 4 HOH A 74 674 674 HOH HOH . D 4 HOH A 75 675 675 HOH HOH . D 4 HOH A 76 676 676 HOH HOH . D 4 HOH A 77 677 677 HOH HOH . D 4 HOH A 78 678 678 HOH HOH . D 4 HOH A 79 679 679 HOH HOH . D 4 HOH A 80 680 680 HOH HOH . D 4 HOH A 81 681 681 HOH HOH . E 4 HOH B 1 801 801 HOH HOH . E 4 HOH B 2 802 802 HOH HOH . E 4 HOH B 3 803 803 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 9M4 . . . C 3 31.185 30.699 -2.148 1 53.64 ? C4 9M4 501 A 1 HETATM 2 C C5 9M4 . . . C 3 32.465 30.66 -1.637 1 54.44 ? C5 9M4 501 A 1 HETATM 3 C C6 9M4 . . . C 3 33.548 30.322 -2.427 1 53.38 ? C6 9M4 501 A 1 HETATM 4 C C7 9M4 . . . C 3 33.34 30.016 -3.764 1 52.71 ? C7 9M4 501 A 1 HETATM 5 C C10 9M4 . . . C 3 31.129 30.255 -8.105 1 51.08 ? C10 9M4 501 A 1 HETATM 6 C C15 9M4 . . . C 3 29.56 26.725 -8.443 1 53.04 ? C15 9M4 501 A 1 HETATM 7 C C17 9M4 . . . C 3 28.448 25.165 -10.09 1 52.13 ? C17 9M4 501 A 1 HETATM 8 C C20 9M4 . . . C 3 29.994 25.542 -7.583 1 53.39 ? C20 9M4 501 A 1 HETATM 9 C C21 9M4 . . . C 3 32.173 29.658 -10.327 1 48.56 ? C21 9M4 501 A 1 HETATM 10 C C22 9M4 . . . C 3 33.461 29.316 -11.054 1 48.51 ? C22 9M4 501 A 1 HETATM 11 C C24 9M4 . . . C 3 34.712 30.918 -9.522 1 49.12 ? C24 9M4 501 A 1 HETATM 12 C C26 9M4 . . . C 3 30.827 31.926 -6.27 1 48.81 ? C26 9M4 501 A 1 HETATM 13 C C28 9M4 . . . C 3 29.002 33.513 -6.09 1 47.26 ? C28 9M4 501 A 1 HETATM 14 C C1 9M4 . . . C 3 31.873 29.705 -5.771 1 52.77 ? C1 9M4 501 A 1 HETATM 15 O O32 9M4 . . . C 3 32.253 28.607 -6.152 1 52.57 ? O32 9M4 501 A 1 HETATM 16 C C2 9M4 . . . C 3 32.052 30.048 -4.315 1 52.9 ? C2 9M4 501 A 1 HETATM 17 C C3 9M4 . . . C 3 30.98 30.391 -3.486 1 53.4 ? C3 9M4 501 A 1 HETATM 18 CL CL8 9M4 . . . C 3 32.72 31.045 0.039 1 55.74 ? CL8 9M4 501 A 1 HETATM 19 N N9 9M4 . . . C 3 31.29 30.626 -6.662 1 51.31 ? N9 9M4 501 A 1 HETATM 20 C C11 9M4 . . . C 3 32.434 29.976 -8.854 1 49.67 ? C11 9M4 501 A 1 HETATM 21 C C23 9M4 . . . C 3 34.455 30.467 -10.986 1 48.69 ? C23 9M4 501 A 1 HETATM 22 C C25 9M4 . . . C 3 33.394 31.173 -8.762 1 49.6 ? C25 9M4 501 A 1 HETATM 23 C C12 9M4 . . . C 3 30.04 29.149 -8.269 1 53.34 ? C12 9M4 501 A 1 HETATM 24 O O13 9M4 . . . C 3 28.861 29.464 -8.373 1 55.81 ? O13 9M4 501 A 1 HETATM 25 N N14 9M4 . . . C 3 30.467 27.87 -8.29 1 53.6 ? N14 9M4 501 A 1 HETATM 26 C C16 9M4 . . . C 3 29.453 26.313 -9.909 1 51.94 ? C16 9M4 501 A 1 HETATM 27 C C18 9M4 . . . C 3 28.821 23.953 -9.234 1 52.3 ? C18 9M4 501 A 1 HETATM 28 C C19 9M4 . . . C 3 29.005 24.35 -7.738 1 52.49 ? C19 9M4 501 A 1 HETATM 29 C C27 9M4 . . . C 3 29.477 32.256 -6.456 1 47.49 ? C27 9M4 501 A 1 HETATM 30 C C29 9M4 . . . C 3 29.88 34.445 -5.539 1 48.38 ? C29 9M4 501 A 1 HETATM 31 C C30 9M4 . . . C 3 31.22 34.119 -5.358 1 48.55 ? C30 9M4 501 A 1 HETATM 32 C C31 9M4 . . . C 3 31.7 32.868 -5.723 1 48.39 ? C31 9M4 501 A 1 HETATM 33 N N33 9M4 . . . C 3 27.637 33.874 -6.263 1 46.62 ? N33 9M4 501 A 1 HETATM 34 C C34 9M4 . . . C 3 26.608 33.131 -6.768 1 47.92 ? C34 9M4 501 A 1 HETATM 35 O O36 9M4 . . . C 3 26.742 31.976 -7.163 1 49.91 ? O36 9M4 501 A 1 HETATM 36 C C35 9M4 . . . C 3 25.283 33.831 -6.807 1 47.35 ? C35 9M4 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 36 #