data_5QCK # _model_server_result.job_id f8z1QHKzrh2VVX1xuuCtfQ _model_server_result.datetime_utc '2024-10-10 17:12:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qck # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5QCK # _exptl.entry_id 5QCK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 542.973 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[[(2~{S},3~{R})-1-[(~{E})-3-[5-chloranyl-2-(1,2,3,4-tetrazol-1-yl)phenyl]prop-2-enoyl]-3-phenyl-pyrrolidin-2-yl]carbonylamino]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QCK _cell.length_a 79.49 _cell.length_b 79.49 _cell.length_c 106.6 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QCK _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 42 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf3 A SG CYS 158 A CYS 168 1_555 A SG CYS 173 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf4 A SG CYS 184 A CYS 191 1_555 A SG CYS 212 A CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? # _chem_comp.formula 'C28 H23 Cl N6 O4' _chem_comp.formula_weight 542.973 _chem_comp.id BUV _chem_comp.mon_nstd_flag . _chem_comp.name '4-[[(2~{S},3~{R})-1-[(~{E})-3-[5-chloranyl-2-(1,2,3,4-tetrazol-1-yl)phenyl]prop-2-enoyl]-3-phenyl-pyrrolidin-2-yl]carbonylamino]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5QCK _atom_sites.fract_transf_matrix[1][1] 0.01258 _atom_sites.fract_transf_matrix[1][2] 0.007263 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014526 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009381 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BUV A 1 301 1 BUV LG1 . C 3 SO4 A 1 302 2 SO4 SO4 . D 4 EDO A 1 303 4 EDO EDO . E 4 EDO A 1 304 11 EDO EDO . F 4 EDO A 1 305 13 EDO EDO . G 5 HOH A 1 401 4 HOH HOH . G 5 HOH A 2 402 34 HOH HOH . G 5 HOH A 3 403 12 HOH HOH . G 5 HOH A 4 404 37 HOH HOH . G 5 HOH A 5 405 16 HOH HOH . G 5 HOH A 6 406 18 HOH HOH . G 5 HOH A 7 407 28 HOH HOH . G 5 HOH A 8 408 25 HOH HOH . G 5 HOH A 9 409 2 HOH HOH . G 5 HOH A 10 410 1 HOH HOH . G 5 HOH A 11 411 11 HOH HOH . G 5 HOH A 12 412 39 HOH HOH . G 5 HOH A 13 413 8 HOH HOH . G 5 HOH A 14 414 36 HOH HOH . G 5 HOH A 15 415 7 HOH HOH . G 5 HOH A 16 416 14 HOH HOH . G 5 HOH A 17 417 22 HOH HOH . G 5 HOH A 18 418 31 HOH HOH . G 5 HOH A 19 419 24 HOH HOH . G 5 HOH A 20 420 38 HOH HOH . G 5 HOH A 21 421 20 HOH HOH . G 5 HOH A 22 422 33 HOH HOH . G 5 HOH A 23 423 3 HOH HOH . G 5 HOH A 24 424 10 HOH HOH . G 5 HOH A 25 425 35 HOH HOH . G 5 HOH A 26 426 9 HOH HOH . G 5 HOH A 27 427 13 HOH HOH . G 5 HOH A 28 428 26 HOH HOH . G 5 HOH A 29 429 29 HOH HOH . G 5 HOH A 30 430 23 HOH HOH . G 5 HOH A 31 431 27 HOH HOH . G 5 HOH A 32 432 21 HOH HOH . G 5 HOH A 33 433 15 HOH HOH . G 5 HOH A 34 434 5 HOH HOH . G 5 HOH A 35 435 6 HOH HOH . G 5 HOH A 36 436 32 HOH HOH . G 5 HOH A 37 437 30 HOH HOH . G 5 HOH A 38 438 19 HOH HOH . G 5 HOH A 39 439 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N14 BUV . . . B 2 40.156 -15.659 26.752 1 75.55 ? N14 BUV 301 A 1 HETATM 2 C C18 BUV . . . B 2 40.384 -21.422 29.182 1 65.39 ? C18 BUV 301 A 1 HETATM 3 C C15 BUV . . . B 2 39.214 -19.259 29.342 1 66.14 ? C15 BUV 301 A 1 HETATM 4 C C19 BUV . . . B 2 40.213 -22.647 28.232 1 66.23 ? C19 BUV 301 A 1 HETATM 5 C C20 BUV . . . B 2 38.94 -22.305 27.439 1 63.28 ? C20 BUV 301 A 1 HETATM 6 C C21 BUV . . . B 2 38.925 -20.797 27.366 1 63.4 ? C21 BUV 301 A 1 HETATM 7 C C22 BUV . . . B 2 41.851 -20.987 29.142 1 73.71 ? C22 BUV 301 A 1 HETATM 8 C C23 BUV . . . B 2 40.258 -24.045 28.806 1 68.27 ? C23 BUV 301 A 1 HETATM 9 C C24 BUV . . . B 2 40.507 -24.286 30.151 1 67.21 ? C24 BUV 301 A 1 HETATM 10 C C11 BUV . . . B 2 38.933 -15.197 25.016 1 72.75 ? C11 BUV 301 A 1 HETATM 11 C C34 BUV . . . B 2 46.709 -21.563 31.041 1 89.71 ? C34 BUV 301 A 1 HETATM 12 C C27 BUV . . . B 2 40.266 -26.424 28.421 1 73.26 ? C27 BUV 301 A 1 HETATM 13 C C33 BUV . . . B 2 46.283 -21.048 29.814 1 87.97 ? C33 BUV 301 A 1 HETATM 14 CL CL1 BUV . . . B 2 34.206 -14.452 29.869 1 66.26 ? CL1 BUV 301 A 1 HETATM 15 C C2 BUV . . . B 2 37.129 -13.852 27.212 1 65.22 ? C2 BUV 301 A 1 HETATM 16 C C3 BUV . . . B 2 35.998 -13.681 27.994 1 67.42 ? C3 BUV 301 A 1 HETATM 17 C C4 BUV . . . B 2 35.63 -14.675 28.878 1 65.77 ? C4 BUV 301 A 1 HETATM 18 C C5 BUV . . . B 2 36.374 -15.831 29.014 1 61.09 ? C5 BUV 301 A 1 HETATM 19 C C6 BUV . . . B 2 37.543 -15.996 28.261 1 61.59 ? C6 BUV 301 A 1 HETATM 20 C C7 BUV . . . B 2 37.887 -15.016 27.312 1 65.94 ? C7 BUV 301 A 1 HETATM 21 N N8 BUV . . . B 2 38.929 -15.24 26.355 1 72.38 ? N8 BUV 301 A 1 HETATM 22 C C9 BUV . . . B 2 38.458 -17.063 28.672 1 61.3 ? C9 BUV 301 A 1 HETATM 23 C C10 BUV . . . B 2 38.207 -18.341 28.77 1 65.27 ? C10 BUV 301 A 1 HETATM 24 N N12 BUV . . . B 2 40.093 -15.591 24.566 1 74.29 ? N12 BUV 301 A 1 HETATM 25 N N13 BUV . . . B 2 40.837 -15.871 25.669 1 74.56 ? N13 BUV 301 A 1 HETATM 26 O O16 BUV . . . B 2 39.817 -19.002 30.384 1 66.23 ? O16 BUV 301 A 1 HETATM 27 N N17 BUV . . . B 2 39.48 -20.408 28.663 1 63.15 ? N17 BUV 301 A 1 HETATM 28 C C25 BUV . . . B 2 40.638 -25.577 30.621 1 71.48 ? C25 BUV 301 A 1 HETATM 29 C C26 BUV . . . B 2 40.527 -26.648 29.756 1 74.84 ? C26 BUV 301 A 1 HETATM 30 C C28 BUV . . . B 2 40.128 -25.132 27.948 1 71.33 ? C28 BUV 301 A 1 HETATM 31 O O29 BUV . . . B 2 42.31 -20.399 28.166 1 75.83 ? O29 BUV 301 A 1 HETATM 32 N N30 BUV . . . B 2 42.572 -21.389 30.219 1 79.16 ? N30 BUV 301 A 1 HETATM 33 C C31 BUV . . . B 2 43.977 -21.402 30.425 1 83.02 ? C31 BUV 301 A 1 HETATM 34 C C32 BUV . . . B 2 44.933 -20.972 29.506 1 85.8 ? C32 BUV 301 A 1 HETATM 35 C C35 BUV . . . B 2 45.744 -21.978 31.956 1 87.12 ? C35 BUV 301 A 1 HETATM 36 C C36 BUV . . . B 2 44.396 -21.901 31.654 1 83.79 ? C36 BUV 301 A 1 HETATM 37 C C37 BUV . . . B 2 48.163 -21.683 31.38 1 92.51 ? C37 BUV 301 A 1 HETATM 38 O O38 BUV . . . B 2 48.545 -22.236 32.418 1 93.31 ? O38 BUV 301 A 1 HETATM 39 O O39 BUV . . . B 2 48.989 -21.212 30.484 1 93.62 ? O39 BUV 301 A 1 HETATM 40 H H46 BUV . . . B 2 40.058 -21.626 30.199 0 65.35 ? H46 BUV 301 A 1 HETATM 41 H H47 BUV . . . B 2 41.032 -22.636 27.514 0 66.26 ? H47 BUV 301 A 1 HETATM 42 H H48 BUV . . . B 2 38.994 -22.744 26.444 0 63.29 ? H48 BUV 301 A 1 HETATM 43 H H49 BUV . . . B 2 38.028 -22.708 27.867 0 63.29 ? H49 BUV 301 A 1 HETATM 44 H H51 BUV . . . B 2 37.914 -20.426 27.203 0 63.43 ? H51 BUV 301 A 1 HETATM 45 H H50 BUV . . . B 2 39.521 -20.425 26.535 0 63.43 ? H50 BUV 301 A 1 HETATM 46 H H52 BUV . . . B 2 40.601 -23.489 30.885 0 67.17 ? H52 BUV 301 A 1 HETATM 47 H H45 BUV . . . B 2 38.12 -14.848 24.384 0 72.83 ? H45 BUV 301 A 1 HETATM 48 H H55 BUV . . . B 2 40.17 -27.26 27.73 0 73.29 ? H55 BUV 301 A 1 HETATM 49 H H59 BUV . . . B 2 46.986 -20.703 29.058 0 87.97 ? H59 BUV 301 A 1 HETATM 50 H H40 BUV . . . B 2 37.409 -13.031 26.556 0 65.14 ? H40 BUV 301 A 1 HETATM 51 H H41 BUV . . . B 2 35.404 -12.772 27.916 0 67.31 ? H41 BUV 301 A 1 HETATM 52 H H42 BUV . . . B 2 36.051 -16.623 29.688 0 61.09 ? H42 BUV 301 A 1 HETATM 53 H H43 BUV . . . B 2 39.436 -16.686 28.963 0 61.31 ? H43 BUV 301 A 1 HETATM 54 H H44 BUV . . . B 2 37.247 -18.764 28.479 0 65.33 ? H44 BUV 301 A 1 HETATM 55 H H53 BUV . . . B 2 40.8 -25.739 31.685 0 71.44 ? H53 BUV 301 A 1 HETATM 56 H H54 BUV . . . B 2 40.668 -27.665 30.119 0 74.83 ? H54 BUV 301 A 1 HETATM 57 H H56 BUV . . . B 2 39.911 -24.996 26.89 0 71.39 ? H56 BUV 301 A 1 HETATM 58 H H57 BUV . . . B 2 42.048 -21.708 31.027 0 79.1 ? H57 BUV 301 A 1 HETATM 59 H H58 BUV . . . B 2 44.688 -20.57 28.525 0 85.81 ? H58 BUV 301 A 1 HETATM 60 H H60 BUV . . . B 2 46.038 -22.373 32.928 0 87.16 ? H60 BUV 301 A 1 HETATM 61 H H61 BUV . . . B 2 43.69 -22.242 32.41 0 83.88 ? H61 BUV 301 A 1 HETATM 62 H H62 BUV . . . B 2 49.938 -21.317 30.758 0 93.55 ? H62 BUV 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 62 #