data_5QCO # _model_server_result.job_id tBGT9DMVfpFo0kyGmyO-Kg _model_server_result.datetime_utc '2024-12-21 16:06:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 5QCO # _exptl.entry_id 5QCO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 569.734 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-19-acetyl-4-[(1R)-1-hydroxy-2-({1-[3-(propan-2-yl)phenyl]cyclopropyl}amino)ethyl]-11-oxa-3,16-diazatricyclo[15.3.1.1~6,10~]docosa-1(21),6(22),7,9,17,19-hexaen-2-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.16 _cell.angle_gamma 90 _cell.entry_id 5QCO _cell.length_a 81.339 _cell.length_b 103.108 _cell.length_c 99.839 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 171 A CYS 155 1_555 A SG CYS 375 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 233 A CYS 217 1_555 A SG CYS 398 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 A SG CYS 285 A CYS 269 1_555 A SG CYS 335 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 B SG CYS 171 B CYS 155 1_555 B SG CYS 375 B CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf5 B SG CYS 233 B CYS 217 1_555 B SG CYS 398 B CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf6 B SG CYS 285 B CYS 269 1_555 B SG CYS 335 B CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf7 C SG CYS 171 C CYS 155 1_555 C SG CYS 375 C CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf8 C SG CYS 233 C CYS 217 1_555 C SG CYS 398 C CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf9 C SG CYS 285 C CYS 269 1_555 C SG CYS 335 C CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C35 H43 N3 O4' _chem_comp.formula_weight 569.734 _chem_comp.id E4A _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-19-acetyl-4-[(1R)-1-hydroxy-2-({1-[3-(propan-2-yl)phenyl]cyclopropyl}amino)ethyl]-11-oxa-3,16-diazatricyclo[15.3.1.1~6,10~]docosa-1(21),6(22),7,9,17,19-hexaen-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C78 C76 E4A sing 83 n n C76 C82 E4A sing 84 n n C76 C69 E4A sing 85 n n C70 C69 E4A doub 86 n y C70 C72 E4A sing 87 n y C69 C67 E4A sing 88 n y C72 C74 E4A doub 89 n y C67 C66 E4A doub 90 n y C74 C66 E4A sing 91 n y C66 C59 E4A sing 92 n n C60 C59 E4A sing 93 n n C60 C63 E4A sing 94 n n C59 C63 E4A sing 95 n n C59 N57 E4A sing 96 n n N57 C54 E4A sing 97 n n O52 C50 E4A sing 98 n n C54 C50 E4A sing 99 n n O49 C48 E4A doub 100 n n C50 C3 E4A sing 101 n n C3 C5 E4A sing 102 n n C3 N1 E4A sing 103 n n O43 C42 E4A doub 104 n n C48 N1 E4A sing 105 n n C48 C36 E4A sing 106 n n C16 C14 E4A doub 107 n y C16 C8 E4A sing 108 n y C5 C8 E4A sing 109 n n C37 C36 E4A doub 110 n y C37 C39 E4A sing 111 n y C14 C12 E4A sing 112 n y C42 C39 E4A sing 113 n n C42 C44 E4A sing 114 n n C8 C9 E4A doub 115 n y C36 C34 E4A sing 116 n y C39 C40 E4A doub 117 n y C12 C11 E4A doub 118 n y C9 C11 E4A sing 119 n y C34 C33 E4A doub 120 n y C40 C33 E4A sing 121 n y C11 O18 E4A sing 122 n n C33 N31 E4A sing 123 n n O18 C19 E4A sing 124 n n N31 C28 E4A sing 125 n n C19 C22 E4A sing 126 n n C28 C25 E4A sing 127 n n C25 C22 E4A sing 128 n n C3 H1 E4A sing 129 n n C5 H2 E4A sing 130 n n C5 H3 E4A sing 131 n n C12 H4 E4A sing 132 n n C14 H5 E4A sing 133 n n C16 H6 E4A sing 134 n n C19 H7 E4A sing 135 n n C19 H8 E4A sing 136 n n C22 H9 E4A sing 137 n n C22 H10 E4A sing 138 n n C25 H11 E4A sing 139 n n C25 H12 E4A sing 140 n n C28 H13 E4A sing 141 n n C28 H14 E4A sing 142 n n C34 H15 E4A sing 143 n n C37 H16 E4A sing 144 n n C40 H17 E4A sing 145 n n C44 H18 E4A sing 146 n n C44 H19 E4A sing 147 n n C44 H20 E4A sing 148 n n C50 H21 E4A sing 149 n n C54 H22 E4A sing 150 n n C54 H23 E4A sing 151 n n C60 H24 E4A sing 152 n n C60 H25 E4A sing 153 n n C63 H26 E4A sing 154 n n C63 H27 E4A sing 155 n n C67 H28 E4A sing 156 n n C70 H29 E4A sing 157 n n C72 H30 E4A sing 158 n n C74 H31 E4A sing 159 n n C76 H32 E4A sing 160 n n C78 H33 E4A sing 161 n n C78 H34 E4A sing 162 n n C78 H35 E4A sing 163 n n C82 H36 E4A sing 164 n n C82 H37 E4A sing 165 n n C82 H38 E4A sing 166 n n C9 H39 E4A sing 167 n n N1 H40 E4A sing 168 n n N31 H41 E4A sing 169 n n N57 H42 E4A sing 170 n n O52 H44 E4A sing 171 n n # _atom_sites.entry_id 5QCO _atom_sites.fract_transf_matrix[1][1] 0.012294 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003331 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009699 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 E4A A 1 401 401 E4A E4A . E 2 E4A B 1 401 401 E4A E4A . F 2 E4A C 1 401 401 E4A E4A . G 3 HOH A 1 501 501 HOH HOH . G 3 HOH A 2 502 502 HOH HOH . G 3 HOH A 3 503 503 HOH HOH . G 3 HOH A 4 504 504 HOH HOH . G 3 HOH A 5 505 505 HOH HOH . G 3 HOH A 6 506 506 HOH HOH . H 3 HOH B 1 501 501 HOH HOH . H 3 HOH B 2 502 502 HOH HOH . H 3 HOH B 3 503 503 HOH HOH . H 3 HOH B 4 504 504 HOH HOH . I 3 HOH C 1 501 501 HOH HOH . I 3 HOH C 2 502 502 HOH HOH . I 3 HOH C 3 503 503 HOH HOH . I 3 HOH C 4 504 504 HOH HOH . I 3 HOH C 5 505 505 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 E4A . . . D 2 31.721 6.399 14.883 1 51.35 ? C3 E4A 401 A 1 HETATM 2 C C5 E4A . . . D 2 32.824 7.235 15.529 1 62.43 ? C5 E4A 401 A 1 HETATM 3 C C8 E4A . . . D 2 32.318 8.492 16.182 1 75.53 ? C8 E4A 401 A 1 HETATM 4 C C11 E4A . . . D 2 31.615 9.677 18.158 1 75.92 ? C11 E4A 401 A 1 HETATM 5 C C12 E4A . . . D 2 31.377 10.816 17.41 1 73.78 ? C12 E4A 401 A 1 HETATM 6 C C14 E4A . . . D 2 31.611 10.785 16.046 1 76.99 ? C14 E4A 401 A 1 HETATM 7 C C16 E4A . . . D 2 32.074 9.633 15.438 1 72.07 ? C16 E4A 401 A 1 HETATM 8 C C19 E4A . . . D 2 30.091 9.771 20.022 1 58.44 ? C19 E4A 401 A 1 HETATM 9 C C22 E4A . . . D 2 30.041 8.95 21.258 1 58.18 ? C22 E4A 401 A 1 HETATM 10 C C25 E4A . . . D 2 29.396 7.632 20.949 1 63.49 ? C25 E4A 401 A 1 HETATM 11 C C28 E4A . . . D 2 27.978 7.821 20.549 1 63.8 ? C28 E4A 401 A 1 HETATM 12 C C33 E4A . . . D 2 27.274 6.666 18.472 1 55.55 ? C33 E4A 401 A 1 HETATM 13 C C34 E4A . . . D 2 28.357 6.698 17.596 1 49.96 ? C34 E4A 401 A 1 HETATM 14 C C36 E4A . . . D 2 28.157 6.649 16.22 1 51.13 ? C36 E4A 401 A 1 HETATM 15 C C37 E4A . . . D 2 26.86 6.577 15.719 1 54.33 ? C37 E4A 401 A 1 HETATM 16 C C39 E4A . . . D 2 25.774 6.547 16.592 1 64.81 ? C39 E4A 401 A 1 HETATM 17 C C40 E4A . . . D 2 25.99 6.59 17.967 1 62.76 ? C40 E4A 401 A 1 HETATM 18 C C42 E4A . . . D 2 24.38 6.449 16.072 1 76.67 ? C42 E4A 401 A 1 HETATM 19 C C44 E4A . . . D 2 23.434 5.469 16.691 0.5 75.61 ? C44 E4A 401 A 1 HETATM 20 C C48 E4A . . . D 2 29.309 6.695 15.26 1 57.85 ? C48 E4A 401 A 1 HETATM 21 C C50 E4A . . . D 2 32.236 4.978 14.646 1 50.14 ? C50 E4A 401 A 1 HETATM 22 C C54 E4A . . . D 2 31.158 4.081 14.046 1 43.84 ? C54 E4A 401 A 1 HETATM 23 C C59 E4A . . . D 2 30.983 2.345 12.29 1 59.25 ? C59 E4A 401 A 1 HETATM 24 C C60 E4A . . . D 2 31.164 0.851 11.974 1 49.24 ? C60 E4A 401 A 1 HETATM 25 C C63 E4A . . . D 2 29.98 1.267 12.802 1 52.22 ? C63 E4A 401 A 1 HETATM 26 C C66 E4A . . . D 2 31.052 3.108 10.966 1 58.12 ? C66 E4A 401 A 1 HETATM 27 C C67 E4A . . . D 2 32.281 3.232 10.325 1 55.78 ? C67 E4A 401 A 1 HETATM 28 C C69 E4A . . . D 2 32.384 3.922 9.119 1 58.9 ? C69 E4A 401 A 1 HETATM 29 C C70 E4A . . . D 2 31.248 4.494 8.577 1 49.41 ? C70 E4A 401 A 1 HETATM 30 C C72 E4A . . . D 2 30.025 4.38 9.211 1 49.93 ? C72 E4A 401 A 1 HETATM 31 C C74 E4A . . . D 2 29.926 3.693 10.404 1 55.7 ? C74 E4A 401 A 1 HETATM 32 C C76 E4A . . . D 2 33.707 4.061 8.37 1 55.47 ? C76 E4A 401 A 1 HETATM 33 C C78 E4A . . . D 2 34.14 5.5 8.289 0.5 53.97 ? C78 E4A 401 A 1 HETATM 34 C C82 E4A . . . D 2 34.826 3.193 8.934 0.5 57.15 ? C82 E4A 401 A 1 HETATM 35 C C9 E4A . . . D 2 32.089 8.521 17.554 1 82.39 ? C9 E4A 401 A 1 HETATM 36 N N1 E4A . . . D 2 30.533 6.394 15.734 1 54.32 ? N1 E4A 401 A 1 HETATM 37 N N31 E4A . . . D 2 27.473 6.682 19.839 1 63.46 ? N31 E4A 401 A 1 HETATM 38 N N57 E4A . . . D 2 31.794 2.942 13.363 1 56.07 ? N57 E4A 401 A 1 HETATM 39 O O18 E4A . . . D 2 31.421 9.671 19.53 1 68.5 ? O18 E4A 401 A 1 HETATM 40 O O43 E4A . . . D 2 24.02 7.148 15.136 0.5 92.51 ? O43 E4A 401 A 1 HETATM 41 O O49 E4A . . . D 2 29.131 6.995 14.082 1 67.9 ? O49 E4A 401 A 1 HETATM 42 O O52 E4A . . . D 2 33.375 5.004 13.784 1 50.6 ? O52 E4A 401 A 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 51 _model_server_stats.query_time_ms 1269 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 42 #