data_5QCO # _model_server_result.job_id 9RDNNYl8TgvGldb-ScB5tg _model_server_result.datetime_utc '2024-12-21 15:51:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 5QCO # _exptl.entry_id 5QCO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 569.734 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-19-acetyl-4-[(1R)-1-hydroxy-2-({1-[3-(propan-2-yl)phenyl]cyclopropyl}amino)ethyl]-11-oxa-3,16-diazatricyclo[15.3.1.1~6,10~]docosa-1(21),6(22),7,9,17,19-hexaen-2-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.16 _cell.angle_gamma 90 _cell.entry_id 5QCO _cell.length_a 81.339 _cell.length_b 103.108 _cell.length_c 99.839 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 171 A CYS 155 1_555 A SG CYS 375 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 233 A CYS 217 1_555 A SG CYS 398 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 A SG CYS 285 A CYS 269 1_555 A SG CYS 335 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 B SG CYS 171 B CYS 155 1_555 B SG CYS 375 B CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf5 B SG CYS 233 B CYS 217 1_555 B SG CYS 398 B CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf6 B SG CYS 285 B CYS 269 1_555 B SG CYS 335 B CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf7 C SG CYS 171 C CYS 155 1_555 C SG CYS 375 C CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf8 C SG CYS 233 C CYS 217 1_555 C SG CYS 398 C CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf9 C SG CYS 285 C CYS 269 1_555 C SG CYS 335 C CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C35 H43 N3 O4' _chem_comp.formula_weight 569.734 _chem_comp.id E4A _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-19-acetyl-4-[(1R)-1-hydroxy-2-({1-[3-(propan-2-yl)phenyl]cyclopropyl}amino)ethyl]-11-oxa-3,16-diazatricyclo[15.3.1.1~6,10~]docosa-1(21),6(22),7,9,17,19-hexaen-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C78 C76 E4A sing 83 n n C76 C82 E4A sing 84 n n C76 C69 E4A sing 85 n n C70 C69 E4A doub 86 n y C70 C72 E4A sing 87 n y C69 C67 E4A sing 88 n y C72 C74 E4A doub 89 n y C67 C66 E4A doub 90 n y C74 C66 E4A sing 91 n y C66 C59 E4A sing 92 n n C60 C59 E4A sing 93 n n C60 C63 E4A sing 94 n n C59 C63 E4A sing 95 n n C59 N57 E4A sing 96 n n N57 C54 E4A sing 97 n n O52 C50 E4A sing 98 n n C54 C50 E4A sing 99 n n O49 C48 E4A doub 100 n n C50 C3 E4A sing 101 n n C3 C5 E4A sing 102 n n C3 N1 E4A sing 103 n n O43 C42 E4A doub 104 n n C48 N1 E4A sing 105 n n C48 C36 E4A sing 106 n n C16 C14 E4A doub 107 n y C16 C8 E4A sing 108 n y C5 C8 E4A sing 109 n n C37 C36 E4A doub 110 n y C37 C39 E4A sing 111 n y C14 C12 E4A sing 112 n y C42 C39 E4A sing 113 n n C42 C44 E4A sing 114 n n C8 C9 E4A doub 115 n y C36 C34 E4A sing 116 n y C39 C40 E4A doub 117 n y C12 C11 E4A doub 118 n y C9 C11 E4A sing 119 n y C34 C33 E4A doub 120 n y C40 C33 E4A sing 121 n y C11 O18 E4A sing 122 n n C33 N31 E4A sing 123 n n O18 C19 E4A sing 124 n n N31 C28 E4A sing 125 n n C19 C22 E4A sing 126 n n C28 C25 E4A sing 127 n n C25 C22 E4A sing 128 n n C3 H1 E4A sing 129 n n C5 H2 E4A sing 130 n n C5 H3 E4A sing 131 n n C12 H4 E4A sing 132 n n C14 H5 E4A sing 133 n n C16 H6 E4A sing 134 n n C19 H7 E4A sing 135 n n C19 H8 E4A sing 136 n n C22 H9 E4A sing 137 n n C22 H10 E4A sing 138 n n C25 H11 E4A sing 139 n n C25 H12 E4A sing 140 n n C28 H13 E4A sing 141 n n C28 H14 E4A sing 142 n n C34 H15 E4A sing 143 n n C37 H16 E4A sing 144 n n C40 H17 E4A sing 145 n n C44 H18 E4A sing 146 n n C44 H19 E4A sing 147 n n C44 H20 E4A sing 148 n n C50 H21 E4A sing 149 n n C54 H22 E4A sing 150 n n C54 H23 E4A sing 151 n n C60 H24 E4A sing 152 n n C60 H25 E4A sing 153 n n C63 H26 E4A sing 154 n n C63 H27 E4A sing 155 n n C67 H28 E4A sing 156 n n C70 H29 E4A sing 157 n n C72 H30 E4A sing 158 n n C74 H31 E4A sing 159 n n C76 H32 E4A sing 160 n n C78 H33 E4A sing 161 n n C78 H34 E4A sing 162 n n C78 H35 E4A sing 163 n n C82 H36 E4A sing 164 n n C82 H37 E4A sing 165 n n C82 H38 E4A sing 166 n n C9 H39 E4A sing 167 n n N1 H40 E4A sing 168 n n N31 H41 E4A sing 169 n n N57 H42 E4A sing 170 n n O52 H44 E4A sing 171 n n # _atom_sites.entry_id 5QCO _atom_sites.fract_transf_matrix[1][1] 0.012294 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003331 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009699 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 E4A A 1 401 401 E4A E4A . E 2 E4A B 1 401 401 E4A E4A . F 2 E4A C 1 401 401 E4A E4A . G 3 HOH A 1 501 501 HOH HOH . G 3 HOH A 2 502 502 HOH HOH . G 3 HOH A 3 503 503 HOH HOH . G 3 HOH A 4 504 504 HOH HOH . G 3 HOH A 5 505 505 HOH HOH . G 3 HOH A 6 506 506 HOH HOH . H 3 HOH B 1 501 501 HOH HOH . H 3 HOH B 2 502 502 HOH HOH . H 3 HOH B 3 503 503 HOH HOH . H 3 HOH B 4 504 504 HOH HOH . I 3 HOH C 1 501 501 HOH HOH . I 3 HOH C 2 502 502 HOH HOH . I 3 HOH C 3 503 503 HOH HOH . I 3 HOH C 4 504 504 HOH HOH . I 3 HOH C 5 505 505 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 E4A . . . F 2 7.98 -43.145 46.965 1 53.93 ? C3 E4A 401 C 1 HETATM 2 C C5 E4A . . . F 2 6.82 -43.981 46.394 1 50.67 ? C5 E4A 401 C 1 HETATM 3 C C8 E4A . . . F 2 5.469 -43.689 47.012 1 62.44 ? C8 E4A 401 C 1 HETATM 4 C C11 E4A . . . F 2 3.341 -42.56 46.928 1 67.1 ? C11 E4A 401 C 1 HETATM 5 C C12 E4A . . . F 2 2.971 -43.119 48.137 1 63.52 ? C12 E4A 401 C 1 HETATM 6 C C14 E4A . . . F 2 3.853 -43.972 48.775 1 71.06 ? C14 E4A 401 C 1 HETATM 7 C C16 E4A . . . F 2 5.092 -44.251 48.22 1 68.35 ? C16 E4A 401 C 1 HETATM 8 C C19 E4A . . . F 2 2.51 -40.359 46.574 1 71.08 ? C19 E4A 401 C 1 HETATM 9 C C22 E4A . . . F 2 2.091 -39.583 45.364 1 64.61 ? C22 E4A 401 C 1 HETATM 10 C C25 E4A . . . F 2 3.101 -38.504 45.077 1 69.09 ? C25 E4A 401 C 1 HETATM 11 C C28 E4A . . . F 2 3.546 -37.813 46.323 1 63.39 ? C28 E4A 401 C 1 HETATM 12 C C33 E4A . . . F 2 5.802 -37.983 47.321 1 62 ? C33 E4A 401 C 1 HETATM 13 C C34 E4A . . . F 2 6.308 -39.28 47.312 1 58.19 ? C34 E4A 401 C 1 HETATM 14 C C36 E4A . . . F 2 7.175 -39.706 48.312 1 61.29 ? C36 E4A 401 C 1 HETATM 15 C C37 E4A . . . F 2 7.506 -38.843 49.351 1 64.07 ? C37 E4A 401 C 1 HETATM 16 C C39 E4A . . . F 2 6.994 -37.549 49.371 1 67.14 ? C39 E4A 401 C 1 HETATM 17 C C40 E4A . . . F 2 6.142 -37.124 48.356 1 58.65 ? C40 E4A 401 C 1 HETATM 18 C C42 E4A . . . F 2 7.375 -36.612 50.465 1 77.96 ? C42 E4A 401 C 1 HETATM 19 C C44 E4A . . . F 2 7.481 -35.151 50.173 0.5 80.01 ? C44 E4A 401 C 1 HETATM 20 C C48 E4A . . . F 2 7.69 -41.109 48.264 1 60.56 ? C48 E4A 401 C 1 HETATM 21 C C50 E4A . . . F 2 9.245 -43.285 46.125 1 60.59 ? C50 E4A 401 C 1 HETATM 22 C C54 E4A . . . F 2 10.385 -42.539 46.819 1 60.96 ? C54 E4A 401 C 1 HETATM 23 C C59 E4A . . . F 2 12.812 -42.697 47.215 1 53.99 ? C59 E4A 401 C 1 HETATM 24 C C60 E4A . . . F 2 14.185 -42.681 46.548 1 53.51 ? C60 E4A 401 C 1 HETATM 25 C C63 E4A . . . F 2 13.518 -41.365 46.823 1 43.31 ? C63 E4A 401 C 1 HETATM 26 C C66 E4A . . . F 2 12.952 -43.635 48.426 1 54.18 ? C66 E4A 401 C 1 HETATM 27 C C67 E4A . . . F 2 13.068 -45.004 48.191 1 43.7 ? C67 E4A 401 C 1 HETATM 28 C C69 E4A . . . F 2 13.198 -45.905 49.248 1 47.09 ? C69 E4A 401 C 1 HETATM 29 C C70 E4A . . . F 2 13.192 -45.417 50.546 1 47.23 ? C70 E4A 401 C 1 HETATM 30 C C72 E4A . . . F 2 13.078 -44.058 50.791 1 48.12 ? C72 E4A 401 C 1 HETATM 31 C C74 E4A . . . F 2 12.962 -43.17 49.735 1 52.5 ? C74 E4A 401 C 1 HETATM 32 C C76 E4A . . . F 2 13.301 -47.425 49.008 1 56.27 ? C76 E4A 401 C 1 HETATM 33 C C78 E4A . . . F 2 11.924 -48.081 48.995 0.5 55.69 ? C78 E4A 401 C 1 HETATM 34 C C82 E4A . . . F 2 14.04 -47.788 47.724 0.5 58.36 ? C82 E4A 401 C 1 HETATM 35 C C9 E4A . . . F 2 4.575 -42.842 46.364 1 72.39 ? C9 E4A 401 C 1 HETATM 36 N N1 E4A . . . F 2 7.576 -41.754 47.1 1 52.71 ? N1 E4A 401 C 1 HETATM 37 N N31 E4A . . . F 2 4.96 -37.563 46.307 1 63.48 ? N31 E4A 401 C 1 HETATM 38 N N57 E4A . . . F 2 11.688 -42.997 46.321 1 56.52 ? N57 E4A 401 C 1 HETATM 39 O O18 E4A . . . F 2 2.536 -41.733 46.209 1 68.14 ? O18 E4A 401 C 1 HETATM 40 O O43 E4A . . . F 2 7.627 -37.038 51.579 0.5 90.72 ? O43 E4A 401 C 1 HETATM 41 O O49 E4A . . . F 2 8.185 -41.642 49.254 1 65.68 ? O49 E4A 401 C 1 HETATM 42 O O52 E4A . . . F 2 9.581 -44.671 46.006 1 55.93 ? O52 E4A 401 C 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 42 #