data_5QE6 # _model_server_result.job_id Fdb54lPN5Apc4c0w07IlSw _model_server_result.datetime_utc '2024-11-22 00:39:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qe6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5QE6 # _exptl.entry_id 5QE6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QE6 _cell.length_a 89.579 _cell.length_b 89.579 _cell.length_c 106.221 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QE6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 367 n n C C2 TRS sing 368 n n C C3 TRS sing 369 n n C N TRS sing 370 n n C1 O1 TRS sing 371 n n C1 H11 TRS sing 372 n n C1 H12 TRS sing 373 n n C2 O2 TRS sing 374 n n C2 H21 TRS sing 375 n n C2 H22 TRS sing 376 n n C3 O3 TRS sing 377 n n C3 H31 TRS sing 378 n n C3 H32 TRS sing 379 n n N HN1 TRS sing 380 n n N HN2 TRS sing 381 n n N HN3 TRS sing 382 n n O1 HO1 TRS sing 383 n n O2 HO2 TRS sing 384 n n O3 HO3 TRS sing 385 n n # _atom_sites.entry_id 5QE6 _atom_sites.fract_transf_matrix[1][1] 0.011163 _atom_sites.fract_transf_matrix[1][2] 0.006445 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01289 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009414 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JHA A 1 401 1 JHA LIG . C 3 TRS A 1 402 500 TRS TRS . D 4 HOH A 1 501 172 HOH HOH . D 4 HOH A 2 502 175 HOH HOH . D 4 HOH A 3 503 99 HOH HOH . D 4 HOH A 4 504 209 HOH HOH . D 4 HOH A 5 505 184 HOH HOH . D 4 HOH A 6 506 123 HOH HOH . D 4 HOH A 7 507 144 HOH HOH . D 4 HOH A 8 508 24 HOH HOH . D 4 HOH A 9 509 204 HOH HOH . D 4 HOH A 10 510 179 HOH HOH . D 4 HOH A 11 511 197 HOH HOH . D 4 HOH A 12 512 114 HOH HOH . D 4 HOH A 13 513 91 HOH HOH . D 4 HOH A 14 514 138 HOH HOH . D 4 HOH A 15 515 221 HOH HOH . D 4 HOH A 16 516 92 HOH HOH . D 4 HOH A 17 517 150 HOH HOH . D 4 HOH A 18 518 53 HOH HOH . D 4 HOH A 19 519 141 HOH HOH . D 4 HOH A 20 520 77 HOH HOH . D 4 HOH A 21 521 176 HOH HOH . D 4 HOH A 22 522 213 HOH HOH . D 4 HOH A 23 523 174 HOH HOH . D 4 HOH A 24 524 52 HOH HOH . D 4 HOH A 25 525 37 HOH HOH . D 4 HOH A 26 526 19 HOH HOH . D 4 HOH A 27 527 20 HOH HOH . D 4 HOH A 28 528 104 HOH HOH . D 4 HOH A 29 529 17 HOH HOH . D 4 HOH A 30 530 97 HOH HOH . D 4 HOH A 31 531 23 HOH HOH . D 4 HOH A 32 532 226 HOH HOH . D 4 HOH A 33 533 13 HOH HOH . D 4 HOH A 34 534 64 HOH HOH . D 4 HOH A 35 535 167 HOH HOH . D 4 HOH A 36 536 90 HOH HOH . D 4 HOH A 37 537 59 HOH HOH . D 4 HOH A 38 538 89 HOH HOH . D 4 HOH A 39 539 217 HOH HOH . D 4 HOH A 40 540 41 HOH HOH . D 4 HOH A 41 541 51 HOH HOH . D 4 HOH A 42 542 38 HOH HOH . D 4 HOH A 43 543 103 HOH HOH . D 4 HOH A 44 544 1 HOH HOH . D 4 HOH A 45 545 113 HOH HOH . D 4 HOH A 46 546 50 HOH HOH . D 4 HOH A 47 547 62 HOH HOH . D 4 HOH A 48 548 4 HOH HOH . D 4 HOH A 49 549 108 HOH HOH . D 4 HOH A 50 550 81 HOH HOH . D 4 HOH A 51 551 165 HOH HOH . D 4 HOH A 52 552 30 HOH HOH . D 4 HOH A 53 553 85 HOH HOH . D 4 HOH A 54 554 126 HOH HOH . D 4 HOH A 55 555 3 HOH HOH . D 4 HOH A 56 556 11 HOH HOH . D 4 HOH A 57 557 215 HOH HOH . D 4 HOH A 58 558 149 HOH HOH . D 4 HOH A 59 559 6 HOH HOH . D 4 HOH A 60 560 8 HOH HOH . D 4 HOH A 61 561 39 HOH HOH . D 4 HOH A 62 562 25 HOH HOH . D 4 HOH A 63 563 102 HOH HOH . D 4 HOH A 64 564 177 HOH HOH . D 4 HOH A 65 565 132 HOH HOH . D 4 HOH A 66 566 121 HOH HOH . D 4 HOH A 67 567 128 HOH HOH . D 4 HOH A 68 568 119 HOH HOH . D 4 HOH A 69 569 10 HOH HOH . D 4 HOH A 70 570 22 HOH HOH . D 4 HOH A 71 571 72 HOH HOH . D 4 HOH A 72 572 29 HOH HOH . D 4 HOH A 73 573 220 HOH HOH . D 4 HOH A 74 574 161 HOH HOH . D 4 HOH A 75 575 71 HOH HOH . D 4 HOH A 76 576 5 HOH HOH . D 4 HOH A 77 577 14 HOH HOH . D 4 HOH A 78 578 127 HOH HOH . D 4 HOH A 79 579 196 HOH HOH . D 4 HOH A 80 580 182 HOH HOH . D 4 HOH A 81 581 211 HOH HOH . D 4 HOH A 82 582 111 HOH HOH . D 4 HOH A 83 583 70 HOH HOH . D 4 HOH A 84 584 48 HOH HOH . D 4 HOH A 85 585 35 HOH HOH . D 4 HOH A 86 586 12 HOH HOH . D 4 HOH A 87 587 40 HOH HOH . D 4 HOH A 88 588 68 HOH HOH . D 4 HOH A 89 589 206 HOH HOH . D 4 HOH A 90 590 198 HOH HOH . D 4 HOH A 91 591 88 HOH HOH . D 4 HOH A 92 592 7 HOH HOH . D 4 HOH A 93 593 105 HOH HOH . D 4 HOH A 94 594 63 HOH HOH . D 4 HOH A 95 595 2 HOH HOH . D 4 HOH A 96 596 162 HOH HOH . D 4 HOH A 97 597 26 HOH HOH . D 4 HOH A 98 598 55 HOH HOH . D 4 HOH A 99 599 16 HOH HOH . D 4 HOH A 100 600 9 HOH HOH . D 4 HOH A 101 601 79 HOH HOH . D 4 HOH A 102 602 49 HOH HOH . D 4 HOH A 103 603 66 HOH HOH . D 4 HOH A 104 604 42 HOH HOH . D 4 HOH A 105 605 200 HOH HOH . D 4 HOH A 106 606 36 HOH HOH . D 4 HOH A 107 607 101 HOH HOH . D 4 HOH A 108 608 130 HOH HOH . D 4 HOH A 109 609 83 HOH HOH . D 4 HOH A 110 610 18 HOH HOH . D 4 HOH A 111 611 146 HOH HOH . D 4 HOH A 112 612 54 HOH HOH . D 4 HOH A 113 613 43 HOH HOH . D 4 HOH A 114 614 153 HOH HOH . D 4 HOH A 115 615 87 HOH HOH . D 4 HOH A 116 616 86 HOH HOH . D 4 HOH A 117 617 47 HOH HOH . D 4 HOH A 118 618 192 HOH HOH . D 4 HOH A 119 619 32 HOH HOH . D 4 HOH A 120 620 95 HOH HOH . D 4 HOH A 121 621 31 HOH HOH . D 4 HOH A 122 622 74 HOH HOH . D 4 HOH A 123 623 84 HOH HOH . D 4 HOH A 124 624 96 HOH HOH . D 4 HOH A 125 625 223 HOH HOH . D 4 HOH A 126 626 169 HOH HOH . D 4 HOH A 127 627 73 HOH HOH . D 4 HOH A 128 628 173 HOH HOH . D 4 HOH A 129 629 76 HOH HOH . D 4 HOH A 130 630 21 HOH HOH . D 4 HOH A 131 631 69 HOH HOH . D 4 HOH A 132 632 225 HOH HOH . D 4 HOH A 133 633 61 HOH HOH . D 4 HOH A 134 634 187 HOH HOH . D 4 HOH A 135 635 58 HOH HOH . D 4 HOH A 136 636 60 HOH HOH . D 4 HOH A 137 637 34 HOH HOH . D 4 HOH A 138 638 157 HOH HOH . D 4 HOH A 139 639 115 HOH HOH . D 4 HOH A 140 640 94 HOH HOH . D 4 HOH A 141 641 227 HOH HOH . D 4 HOH A 142 642 136 HOH HOH . D 4 HOH A 143 643 178 HOH HOH . D 4 HOH A 144 644 131 HOH HOH . D 4 HOH A 145 645 98 HOH HOH . D 4 HOH A 146 646 75 HOH HOH . D 4 HOH A 147 647 205 HOH HOH . D 4 HOH A 148 648 15 HOH HOH . D 4 HOH A 149 649 185 HOH HOH . D 4 HOH A 150 650 222 HOH HOH . D 4 HOH A 151 651 210 HOH HOH . D 4 HOH A 152 652 133 HOH HOH . D 4 HOH A 153 653 180 HOH HOH . D 4 HOH A 154 654 45 HOH HOH . D 4 HOH A 155 655 46 HOH HOH . D 4 HOH A 156 656 214 HOH HOH . D 4 HOH A 157 657 106 HOH HOH . D 4 HOH A 158 658 155 HOH HOH . D 4 HOH A 159 659 80 HOH HOH . D 4 HOH A 160 660 139 HOH HOH . D 4 HOH A 161 661 188 HOH HOH . D 4 HOH A 162 662 33 HOH HOH . D 4 HOH A 163 663 159 HOH HOH . D 4 HOH A 164 664 219 HOH HOH . D 4 HOH A 165 665 163 HOH HOH . D 4 HOH A 166 666 27 HOH HOH . D 4 HOH A 167 667 168 HOH HOH . D 4 HOH A 168 668 44 HOH HOH . D 4 HOH A 169 669 183 HOH HOH . D 4 HOH A 170 670 207 HOH HOH . D 4 HOH A 171 671 135 HOH HOH . D 4 HOH A 172 672 142 HOH HOH . D 4 HOH A 173 673 154 HOH HOH . D 4 HOH A 174 674 171 HOH HOH . D 4 HOH A 175 675 122 HOH HOH . D 4 HOH A 176 676 67 HOH HOH . D 4 HOH A 177 677 190 HOH HOH . D 4 HOH A 178 678 112 HOH HOH . D 4 HOH A 179 679 110 HOH HOH . D 4 HOH A 180 680 181 HOH HOH . D 4 HOH A 181 681 212 HOH HOH . D 4 HOH A 182 682 137 HOH HOH . D 4 HOH A 183 683 194 HOH HOH . D 4 HOH A 184 684 129 HOH HOH . D 4 HOH A 185 685 199 HOH HOH . D 4 HOH A 186 686 216 HOH HOH . D 4 HOH A 187 687 186 HOH HOH . D 4 HOH A 188 688 143 HOH HOH . D 4 HOH A 189 689 195 HOH HOH . D 4 HOH A 190 690 116 HOH HOH . D 4 HOH A 191 691 117 HOH HOH . D 4 HOH A 192 692 228 HOH HOH . D 4 HOH A 193 693 134 HOH HOH . D 4 HOH A 194 694 93 HOH HOH . D 4 HOH A 195 695 193 HOH HOH . D 4 HOH A 196 696 107 HOH HOH . D 4 HOH A 197 697 201 HOH HOH . D 4 HOH A 198 698 166 HOH HOH . D 4 HOH A 199 699 164 HOH HOH . D 4 HOH A 200 700 65 HOH HOH . D 4 HOH A 201 701 28 HOH HOH . D 4 HOH A 202 702 151 HOH HOH . D 4 HOH A 203 703 224 HOH HOH . D 4 HOH A 204 704 158 HOH HOH . D 4 HOH A 205 705 208 HOH HOH . D 4 HOH A 206 706 100 HOH HOH . D 4 HOH A 207 707 218 HOH HOH . D 4 HOH A 208 708 120 HOH HOH . D 4 HOH A 209 709 78 HOH HOH . D 4 HOH A 210 710 160 HOH HOH . D 4 HOH A 211 711 148 HOH HOH . D 4 HOH A 212 712 125 HOH HOH . D 4 HOH A 213 713 170 HOH HOH . D 4 HOH A 214 714 56 HOH HOH . D 4 HOH A 215 715 156 HOH HOH . D 4 HOH A 216 716 147 HOH HOH . D 4 HOH A 217 717 109 HOH HOH . D 4 HOH A 218 718 57 HOH HOH . D 4 HOH A 219 719 145 HOH HOH . D 4 HOH A 220 720 118 HOH HOH . D 4 HOH A 221 721 124 HOH HOH . D 4 HOH A 222 722 191 HOH HOH . D 4 HOH A 223 723 152 HOH HOH . D 4 HOH A 224 724 140 HOH HOH . D 4 HOH A 225 725 82 HOH HOH . D 4 HOH A 226 726 202 HOH HOH . D 4 HOH A 227 727 203 HOH HOH . D 4 HOH A 228 728 189 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 3 21.043 -40.67 -22.521 1 50.28 ? C TRS 402 A 1 HETATM 2 C C1 TRS . . . C 3 20.513 -39.595 -21.592 1 53.2 ? C1 TRS 402 A 1 HETATM 3 C C2 TRS . . . C 3 20.418 -40.571 -23.876 1 75.77 ? C2 TRS 402 A 1 HETATM 4 C C3 TRS . . . C 3 20.785 -42.037 -21.969 1 66.08 ? C3 TRS 402 A 1 HETATM 5 N N TRS . . . C 3 22.505 -40.487 -22.656 1 78.95 ? N TRS 402 A 1 HETATM 6 O O1 TRS . . . C 3 21.608 -38.761 -21.246 1 75.13 ? O1 TRS 402 A 1 HETATM 7 O O2 TRS . . . C 3 20.713 -39.257 -24.327 1 77.46 ? O2 TRS 402 A 1 HETATM 8 O O3 TRS . . . C 3 21.369 -41.993 -20.739 1 33.74 ? O3 TRS 402 A 1 HETATM 9 H H11 TRS . . . C 3 20.089 -40.061 -20.7 1 63.84 ? H11 TRS 402 A 1 HETATM 10 H H12 TRS . . . C 3 19.74 -39.02 -22.105 1 63.84 ? H12 TRS 402 A 1 HETATM 11 H H21 TRS . . . C 3 19.342 -40.735 -23.793 1 90.93 ? H21 TRS 402 A 1 HETATM 12 H H22 TRS . . . C 3 20.852 -41.328 -24.533 1 90.93 ? H22 TRS 402 A 1 HETATM 13 H H31 TRS . . . C 3 19.72 -42.248 -21.859 1 79.3 ? H31 TRS 402 A 1 HETATM 14 H H32 TRS . . . C 3 21.253 -42.823 -22.566 1 79.3 ? H32 TRS 402 A 1 HETATM 15 H HN1 TRS . . . C 3 22.951 -40.583 -21.729 1 94.74 ? HN1 TRS 402 A 1 HETATM 16 H HN2 TRS . . . C 3 22.884 -41.203 -23.297 1 94.74 ? HN2 TRS 402 A 1 HETATM 17 H HN3 TRS . . . C 3 22.701 -39.547 -23.037 1 94.74 ? HN3 TRS 402 A 1 HETATM 18 H HO1 TRS . . . C 3 21.305 -38.061 -20.652 1 90.15 ? HO1 TRS 402 A 1 HETATM 19 H HO2 TRS . . . C 3 20.334 -39.125 -25.207 1 92.95 ? HO2 TRS 402 A 1 HETATM 20 H HO3 TRS . . . C 3 21.761 -41.12 -20.6 1 40.48 ? HO3 TRS 402 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #