data_5QE8
#
_model_server_result.job_id            vPV454CMl37HajsgNU2fpg 
_model_server_result.datetime_utc      '2024-11-08 00:43:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5qe8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    5QE8 
#
_exptl.entry_id    5QE8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5QE8 
_cell.length_a            89.888 
_cell.length_b            89.888 
_cell.length_c            106.546 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5QE8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 366 n n 
C C2 TRS sing 367 n n 
C C3 TRS sing 368 n n 
C N TRS sing 369 n n 
C1 O1 TRS sing 370 n n 
C1 H11 TRS sing 371 n n 
C1 H12 TRS sing 372 n n 
C2 O2 TRS sing 373 n n 
C2 H21 TRS sing 374 n n 
C2 H22 TRS sing 375 n n 
C3 O3 TRS sing 376 n n 
C3 H31 TRS sing 377 n n 
C3 H32 TRS sing 378 n n 
N HN1 TRS sing 379 n n 
N HN2 TRS sing 380 n n 
N HN3 TRS sing 381 n n 
O1 HO1 TRS sing 382 n n 
O2 HO2 TRS sing 383 n n 
O3 HO3 TRS sing 384 n n 
#
_atom_sites.entry_id                     5QE8 
_atom_sites.fract_transf_matrix[1][1]    0.011125 
_atom_sites.fract_transf_matrix[1][2]    0.006423 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012846 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009386 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 JHJ A 1 401 1 JHJ LIG . 
C 2 JHJ A 1 402 2 JHJ LIG . 
D 2 JHJ A 1 403 3 JHJ LIG . 
E 3 TRS A 1 404 500 TRS TRS . 
F 4 HOH A 1 501 38 HOH HOH . 
F 4 HOH A 2 502 166 HOH HOH . 
F 4 HOH A 3 503 186 HOH HOH . 
F 4 HOH A 4 504 150 HOH HOH . 
F 4 HOH A 5 505 198 HOH HOH . 
F 4 HOH A 6 506 139 HOH HOH . 
F 4 HOH A 7 507 109 HOH HOH . 
F 4 HOH A 8 508 119 HOH HOH . 
F 4 HOH A 9 509 128 HOH HOH . 
F 4 HOH A 10 510 110 HOH HOH . 
F 4 HOH A 11 511 67 HOH HOH . 
F 4 HOH A 12 512 144 HOH HOH . 
F 4 HOH A 13 513 194 HOH HOH . 
F 4 HOH A 14 514 72 HOH HOH . 
F 4 HOH A 15 515 195 HOH HOH . 
F 4 HOH A 16 516 188 HOH HOH . 
F 4 HOH A 17 517 157 HOH HOH . 
F 4 HOH A 18 518 57 HOH HOH . 
F 4 HOH A 19 519 25 HOH HOH . 
F 4 HOH A 20 520 54 HOH HOH . 
F 4 HOH A 21 521 132 HOH HOH . 
F 4 HOH A 22 522 208 HOH HOH . 
F 4 HOH A 23 523 55 HOH HOH . 
F 4 HOH A 24 524 19 HOH HOH . 
F 4 HOH A 25 525 124 HOH HOH . 
F 4 HOH A 26 526 138 HOH HOH . 
F 4 HOH A 27 527 76 HOH HOH . 
F 4 HOH A 28 528 77 HOH HOH . 
F 4 HOH A 29 529 21 HOH HOH . 
F 4 HOH A 30 530 215 HOH HOH . 
F 4 HOH A 31 531 83 HOH HOH . 
F 4 HOH A 32 532 97 HOH HOH . 
F 4 HOH A 33 533 73 HOH HOH . 
F 4 HOH A 34 534 173 HOH HOH . 
F 4 HOH A 35 535 92 HOH HOH . 
F 4 HOH A 36 536 35 HOH HOH . 
F 4 HOH A 37 537 201 HOH HOH . 
F 4 HOH A 38 538 141 HOH HOH . 
F 4 HOH A 39 539 156 HOH HOH . 
F 4 HOH A 40 540 121 HOH HOH . 
F 4 HOH A 41 541 17 HOH HOH . 
F 4 HOH A 42 542 42 HOH HOH . 
F 4 HOH A 43 543 6 HOH HOH . 
F 4 HOH A 44 544 4 HOH HOH . 
F 4 HOH A 45 545 189 HOH HOH . 
F 4 HOH A 46 546 11 HOH HOH . 
F 4 HOH A 47 547 3 HOH HOH . 
F 4 HOH A 48 548 23 HOH HOH . 
F 4 HOH A 49 549 40 HOH HOH . 
F 4 HOH A 50 550 118 HOH HOH . 
F 4 HOH A 51 551 13 HOH HOH . 
F 4 HOH A 52 552 108 HOH HOH . 
F 4 HOH A 53 553 44 HOH HOH . 
F 4 HOH A 54 554 133 HOH HOH . 
F 4 HOH A 55 555 5 HOH HOH . 
F 4 HOH A 56 556 24 HOH HOH . 
F 4 HOH A 57 557 29 HOH HOH . 
F 4 HOH A 58 558 66 HOH HOH . 
F 4 HOH A 59 559 59 HOH HOH . 
F 4 HOH A 60 560 36 HOH HOH . 
F 4 HOH A 61 561 100 HOH HOH . 
F 4 HOH A 62 562 51 HOH HOH . 
F 4 HOH A 63 563 91 HOH HOH . 
F 4 HOH A 64 564 112 HOH HOH . 
F 4 HOH A 65 565 7 HOH HOH . 
F 4 HOH A 66 566 151 HOH HOH . 
F 4 HOH A 67 567 185 HOH HOH . 
F 4 HOH A 68 568 117 HOH HOH . 
F 4 HOH A 69 569 8 HOH HOH . 
F 4 HOH A 70 570 114 HOH HOH . 
F 4 HOH A 71 571 79 HOH HOH . 
F 4 HOH A 72 572 131 HOH HOH . 
F 4 HOH A 73 573 30 HOH HOH . 
F 4 HOH A 74 574 101 HOH HOH . 
F 4 HOH A 75 575 81 HOH HOH . 
F 4 HOH A 76 576 137 HOH HOH . 
F 4 HOH A 77 577 50 HOH HOH . 
F 4 HOH A 78 578 26 HOH HOH . 
F 4 HOH A 79 579 45 HOH HOH . 
F 4 HOH A 80 580 171 HOH HOH . 
F 4 HOH A 81 581 86 HOH HOH . 
F 4 HOH A 82 582 116 HOH HOH . 
F 4 HOH A 83 583 56 HOH HOH . 
F 4 HOH A 84 584 87 HOH HOH . 
F 4 HOH A 85 585 1 HOH HOH . 
F 4 HOH A 86 586 74 HOH HOH . 
F 4 HOH A 87 587 12 HOH HOH . 
F 4 HOH A 88 588 10 HOH HOH . 
F 4 HOH A 89 589 41 HOH HOH . 
F 4 HOH A 90 590 167 HOH HOH . 
F 4 HOH A 91 591 129 HOH HOH . 
F 4 HOH A 92 592 103 HOH HOH . 
F 4 HOH A 93 593 65 HOH HOH . 
F 4 HOH A 94 594 105 HOH HOH . 
F 4 HOH A 95 595 43 HOH HOH . 
F 4 HOH A 96 596 126 HOH HOH . 
F 4 HOH A 97 597 143 HOH HOH . 
F 4 HOH A 98 598 90 HOH HOH . 
F 4 HOH A 99 599 9 HOH HOH . 
F 4 HOH A 100 600 122 HOH HOH . 
F 4 HOH A 101 601 88 HOH HOH . 
F 4 HOH A 102 602 32 HOH HOH . 
F 4 HOH A 103 603 31 HOH HOH . 
F 4 HOH A 104 604 69 HOH HOH . 
F 4 HOH A 105 605 205 HOH HOH . 
F 4 HOH A 106 606 39 HOH HOH . 
F 4 HOH A 107 607 207 HOH HOH . 
F 4 HOH A 108 608 148 HOH HOH . 
F 4 HOH A 109 609 14 HOH HOH . 
F 4 HOH A 110 610 2 HOH HOH . 
F 4 HOH A 111 611 135 HOH HOH . 
F 4 HOH A 112 612 18 HOH HOH . 
F 4 HOH A 113 613 20 HOH HOH . 
F 4 HOH A 114 614 49 HOH HOH . 
F 4 HOH A 115 615 113 HOH HOH . 
F 4 HOH A 116 616 145 HOH HOH . 
F 4 HOH A 117 617 93 HOH HOH . 
F 4 HOH A 118 618 211 HOH HOH . 
F 4 HOH A 119 619 16 HOH HOH . 
F 4 HOH A 120 620 33 HOH HOH . 
F 4 HOH A 121 621 170 HOH HOH . 
F 4 HOH A 122 622 89 HOH HOH . 
F 4 HOH A 123 623 214 HOH HOH . 
F 4 HOH A 124 624 85 HOH HOH . 
F 4 HOH A 125 625 147 HOH HOH . 
F 4 HOH A 126 626 22 HOH HOH . 
F 4 HOH A 127 627 134 HOH HOH . 
F 4 HOH A 128 628 64 HOH HOH . 
F 4 HOH A 129 629 96 HOH HOH . 
F 4 HOH A 130 630 58 HOH HOH . 
F 4 HOH A 131 631 78 HOH HOH . 
F 4 HOH A 132 632 75 HOH HOH . 
F 4 HOH A 133 633 15 HOH HOH . 
F 4 HOH A 134 634 53 HOH HOH . 
F 4 HOH A 135 635 179 HOH HOH . 
F 4 HOH A 136 636 47 HOH HOH . 
F 4 HOH A 137 637 169 HOH HOH . 
F 4 HOH A 138 638 99 HOH HOH . 
F 4 HOH A 139 639 184 HOH HOH . 
F 4 HOH A 140 640 34 HOH HOH . 
F 4 HOH A 141 641 187 HOH HOH . 
F 4 HOH A 142 642 161 HOH HOH . 
F 4 HOH A 143 643 216 HOH HOH . 
F 4 HOH A 144 644 84 HOH HOH . 
F 4 HOH A 145 645 102 HOH HOH . 
F 4 HOH A 146 646 127 HOH HOH . 
F 4 HOH A 147 647 210 HOH HOH . 
F 4 HOH A 148 648 106 HOH HOH . 
F 4 HOH A 149 649 98 HOH HOH . 
F 4 HOH A 150 650 192 HOH HOH . 
F 4 HOH A 151 651 37 HOH HOH . 
F 4 HOH A 152 652 191 HOH HOH . 
F 4 HOH A 153 653 120 HOH HOH . 
F 4 HOH A 154 654 46 HOH HOH . 
F 4 HOH A 155 655 217 HOH HOH . 
F 4 HOH A 156 656 62 HOH HOH . 
F 4 HOH A 157 657 107 HOH HOH . 
F 4 HOH A 158 658 27 HOH HOH . 
F 4 HOH A 159 659 48 HOH HOH . 
F 4 HOH A 160 660 146 HOH HOH . 
F 4 HOH A 161 661 154 HOH HOH . 
F 4 HOH A 162 662 104 HOH HOH . 
F 4 HOH A 163 663 163 HOH HOH . 
F 4 HOH A 164 664 160 HOH HOH . 
F 4 HOH A 165 665 200 HOH HOH . 
F 4 HOH A 166 666 162 HOH HOH . 
F 4 HOH A 167 667 197 HOH HOH . 
F 4 HOH A 168 668 130 HOH HOH . 
F 4 HOH A 169 669 196 HOH HOH . 
F 4 HOH A 170 670 182 HOH HOH . 
F 4 HOH A 171 671 190 HOH HOH . 
F 4 HOH A 172 672 80 HOH HOH . 
F 4 HOH A 173 673 63 HOH HOH . 
F 4 HOH A 174 674 115 HOH HOH . 
F 4 HOH A 175 675 202 HOH HOH . 
F 4 HOH A 176 676 159 HOH HOH . 
F 4 HOH A 177 677 193 HOH HOH . 
F 4 HOH A 178 678 136 HOH HOH . 
F 4 HOH A 179 679 71 HOH HOH . 
F 4 HOH A 180 680 176 HOH HOH . 
F 4 HOH A 181 681 227 HOH HOH . 
F 4 HOH A 182 682 221 HOH HOH . 
F 4 HOH A 183 683 52 HOH HOH . 
F 4 HOH A 184 684 140 HOH HOH . 
F 4 HOH A 185 685 204 HOH HOH . 
F 4 HOH A 186 686 226 HOH HOH . 
F 4 HOH A 187 687 199 HOH HOH . 
F 4 HOH A 188 688 177 HOH HOH . 
F 4 HOH A 189 689 219 HOH HOH . 
F 4 HOH A 190 690 28 HOH HOH . 
F 4 HOH A 191 691 158 HOH HOH . 
F 4 HOH A 192 692 94 HOH HOH . 
F 4 HOH A 193 693 172 HOH HOH . 
F 4 HOH A 194 694 218 HOH HOH . 
F 4 HOH A 195 695 68 HOH HOH . 
F 4 HOH A 196 696 175 HOH HOH . 
F 4 HOH A 197 697 142 HOH HOH . 
F 4 HOH A 198 698 70 HOH HOH . 
F 4 HOH A 199 699 223 HOH HOH . 
F 4 HOH A 200 700 225 HOH HOH . 
F 4 HOH A 201 701 222 HOH HOH . 
F 4 HOH A 202 702 203 HOH HOH . 
F 4 HOH A 203 703 95 HOH HOH . 
F 4 HOH A 204 704 168 HOH HOH . 
F 4 HOH A 205 705 206 HOH HOH . 
F 4 HOH A 206 706 82 HOH HOH . 
F 4 HOH A 207 707 178 HOH HOH . 
F 4 HOH A 208 708 60 HOH HOH . 
F 4 HOH A 209 709 123 HOH HOH . 
F 4 HOH A 210 710 149 HOH HOH . 
F 4 HOH A 211 711 220 HOH HOH . 
F 4 HOH A 212 712 228 HOH HOH . 
F 4 HOH A 213 713 212 HOH HOH . 
F 4 HOH A 214 714 111 HOH HOH . 
F 4 HOH A 215 715 155 HOH HOH . 
F 4 HOH A 216 716 153 HOH HOH . 
F 4 HOH A 217 717 224 HOH HOH . 
F 4 HOH A 218 718 164 HOH HOH . 
F 4 HOH A 219 719 180 HOH HOH . 
F 4 HOH A 220 720 165 HOH HOH . 
F 4 HOH A 221 721 61 HOH HOH . 
F 4 HOH A 222 722 183 HOH HOH . 
F 4 HOH A 223 723 209 HOH HOH . 
F 4 HOH A 224 724 125 HOH HOH . 
F 4 HOH A 225 725 152 HOH HOH . 
F 4 HOH A 226 726 213 HOH HOH . 
F 4 HOH A 227 727 181 HOH HOH . 
F 4 HOH A 228 728 174 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . E 3 21.387 -41.006 -22.631 1 26.81 ? C TRS 404 A 1 
HETATM 2 C C1 TRS . . . E 3 20.849 -39.927 -21.702 1 48.77 ? C1 TRS 404 A 1 
HETATM 3 C C2 TRS . . . E 3 20.761 -40.934 -23.986 1 93.74 ? C2 TRS 404 A 1 
HETATM 4 C C3 TRS . . . E 3 21.16 -42.365 -22.048 1 80.13 ? C3 TRS 404 A 1 
HETATM 5 N N TRS . . . E 3 22.856 -40.814 -22.759 1 77.32 ? N TRS 404 A 1 
HETATM 6 O O1 TRS . . . E 3 21.905 -39.068 -21.352 1 120.79 ? O1 TRS 404 A 1 
HETATM 7 O O2 TRS . . . E 3 20.961 -39.61 -24.448 1 57.68 ? O2 TRS 404 A 1 
HETATM 8 O O3 TRS . . . E 3 21.721 -42.292 -20.809 1 33.48 ? O3 TRS 404 A 1 
HETATM 9 H H11 TRS . . . E 3 20.464 -40.328 -20.907 1 58.52 ? H11 TRS 404 A 1 
HETATM 10 H H12 TRS . . . E 3 20.141 -39.429 -22.139 1 58.52 ? H12 TRS 404 A 1 
HETATM 11 H H21 TRS . . . E 3 19.815 -41.146 -23.942 1 112.49 ? H21 TRS 404 A 1 
HETATM 12 H H22 TRS . . . E 3 21.167 -41.576 -24.589 1 112.49 ? H22 TRS 404 A 1 
HETATM 13 H H31 TRS . . . E 3 21.577 -43.056 -22.586 1 96.16 ? H31 TRS 404 A 1 
HETATM 14 H H32 TRS . . . E 3 20.215 -42.576 -21.998 1 96.16 ? H32 TRS 404 A 1 
HETATM 15 H HN1 TRS . . . E 3 23.263 -41.519 -22.482 1 92.78 ? HN1 TRS 404 A 1 
HETATM 16 H HN2 TRS . . . E 3 23.099 -40.138 -22.286 1 92.78 ? HN2 TRS 404 A 1 
HETATM 17 H HN3 TRS . . . E 3 23.056 -40.673 -23.583 1 92.78 ? HN3 TRS 404 A 1 
HETATM 18 H HO1 TRS . . . E 3 21.772 -38.76 -20.582 1 144.95 ? HO1 TRS 404 A 1 
HETATM 19 H HO2 TRS . . . E 3 20.623 -39.526 -25.212 1 69.22 ? HO2 TRS 404 A 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           19 
#