data_5QGI
#
_model_server_result.job_id            bSE5cfDk0z0VwT-4EvP7dQ 
_model_server_result.datetime_utc      '2024-11-15 00:17:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5qgi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":304}' 
#
_entry.id    5QGI 
#
_exptl.entry_id    5QGI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5QGI 
_cell.length_a            126.501 
_cell.length_b            126.501 
_cell.length_c            41.716 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5QGI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        150 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 3 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ARG 87 A ARG 101 1_555 A N HYP 88 A HYP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale2 A C HYP 88 A HYP 102 1_555 A N HIS 89 A HIS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 A C VAL 94 A VAL 108 1_555 A N CSO 95 A CSO 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale4 A C CSO 95 A CSO 109 1_555 A N CYS 96 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 135 n n 
S C1 DMS sing 136 n n 
S C2 DMS sing 137 n n 
C1 H11 DMS sing 138 n n 
C1 H12 DMS sing 139 n n 
C1 H13 DMS sing 140 n n 
C2 H21 DMS sing 141 n n 
C2 H22 DMS sing 142 n n 
C2 H23 DMS sing 143 n n 
#
_atom_sites.entry_id                     5QGI 
_atom_sites.fract_transf_matrix[1][1]    0.007905 
_atom_sites.fract_transf_matrix[1][2]    0.004564 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009128 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023972 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 301 1 ACT ACT . 
C 2 ACT A 1 302 2 ACT ACT . 
D 3 DMS A 1 303 1 DMS DMS . 
E 3 DMS A 1 304 2 DMS DMS . 
F 4 B0V A 1 305 1 B0V LIG . 
G 5 HOH A 1 401 69 HOH HOH . 
G 5 HOH A 2 402 94 HOH HOH . 
G 5 HOH A 3 403 9 HOH HOH . 
G 5 HOH A 4 404 56 HOH HOH . 
G 5 HOH A 5 405 53 HOH HOH . 
G 5 HOH A 6 406 140 HOH HOH . 
G 5 HOH A 7 407 143 HOH HOH . 
G 5 HOH A 8 408 162 HOH HOH . 
G 5 HOH A 9 409 199 HOH HOH . 
G 5 HOH A 10 410 166 HOH HOH . 
G 5 HOH A 11 411 80 HOH HOH . 
G 5 HOH A 12 412 156 HOH HOH . 
G 5 HOH A 13 413 158 HOH HOH . 
G 5 HOH A 14 414 124 HOH HOH . 
G 5 HOH A 15 415 154 HOH HOH . 
G 5 HOH A 16 416 198 HOH HOH . 
G 5 HOH A 17 417 77 HOH HOH . 
G 5 HOH A 18 418 13 HOH HOH . 
G 5 HOH A 19 419 101 HOH HOH . 
G 5 HOH A 20 420 167 HOH HOH . 
G 5 HOH A 21 421 76 HOH HOH . 
G 5 HOH A 22 422 157 HOH HOH . 
G 5 HOH A 23 423 113 HOH HOH . 
G 5 HOH A 24 424 48 HOH HOH . 
G 5 HOH A 25 425 105 HOH HOH . 
G 5 HOH A 26 426 24 HOH HOH . 
G 5 HOH A 27 427 128 HOH HOH . 
G 5 HOH A 28 428 65 HOH HOH . 
G 5 HOH A 29 429 134 HOH HOH . 
G 5 HOH A 30 430 49 HOH HOH . 
G 5 HOH A 31 431 109 HOH HOH . 
G 5 HOH A 32 432 36 HOH HOH . 
G 5 HOH A 33 433 97 HOH HOH . 
G 5 HOH A 34 434 89 HOH HOH . 
G 5 HOH A 35 435 14 HOH HOH . 
G 5 HOH A 36 436 47 HOH HOH . 
G 5 HOH A 37 437 186 HOH HOH . 
G 5 HOH A 38 438 71 HOH HOH . 
G 5 HOH A 39 439 64 HOH HOH . 
G 5 HOH A 40 440 38 HOH HOH . 
G 5 HOH A 41 441 62 HOH HOH . 
G 5 HOH A 42 442 20 HOH HOH . 
G 5 HOH A 43 443 26 HOH HOH . 
G 5 HOH A 44 444 179 HOH HOH . 
G 5 HOH A 45 445 160 HOH HOH . 
G 5 HOH A 46 446 197 HOH HOH . 
G 5 HOH A 47 447 35 HOH HOH . 
G 5 HOH A 48 448 15 HOH HOH . 
G 5 HOH A 49 449 117 HOH HOH . 
G 5 HOH A 50 450 6 HOH HOH . 
G 5 HOH A 51 451 137 HOH HOH . 
G 5 HOH A 52 452 104 HOH HOH . 
G 5 HOH A 53 453 108 HOH HOH . 
G 5 HOH A 54 454 85 HOH HOH . 
G 5 HOH A 55 455 146 HOH HOH . 
G 5 HOH A 56 456 19 HOH HOH . 
G 5 HOH A 57 457 86 HOH HOH . 
G 5 HOH A 58 458 10 HOH HOH . 
G 5 HOH A 59 459 102 HOH HOH . 
G 5 HOH A 60 460 3 HOH HOH . 
G 5 HOH A 61 461 99 HOH HOH . 
G 5 HOH A 62 462 39 HOH HOH . 
G 5 HOH A 63 463 8 HOH HOH . 
G 5 HOH A 64 464 116 HOH HOH . 
G 5 HOH A 65 465 61 HOH HOH . 
G 5 HOH A 66 466 75 HOH HOH . 
G 5 HOH A 67 467 28 HOH HOH . 
G 5 HOH A 68 468 7 HOH HOH . 
G 5 HOH A 69 469 196 HOH HOH . 
G 5 HOH A 70 470 58 HOH HOH . 
G 5 HOH A 71 471 43 HOH HOH . 
G 5 HOH A 72 472 34 HOH HOH . 
G 5 HOH A 73 473 22 HOH HOH . 
G 5 HOH A 74 474 12 HOH HOH . 
G 5 HOH A 75 475 1 HOH HOH . 
G 5 HOH A 76 476 118 HOH HOH . 
G 5 HOH A 77 477 55 HOH HOH . 
G 5 HOH A 78 478 25 HOH HOH . 
G 5 HOH A 79 479 103 HOH HOH . 
G 5 HOH A 80 480 183 HOH HOH . 
G 5 HOH A 81 481 152 HOH HOH . 
G 5 HOH A 82 482 2 HOH HOH . 
G 5 HOH A 83 483 125 HOH HOH . 
G 5 HOH A 84 484 193 HOH HOH . 
G 5 HOH A 85 485 141 HOH HOH . 
G 5 HOH A 86 486 27 HOH HOH . 
G 5 HOH A 87 487 139 HOH HOH . 
G 5 HOH A 88 488 78 HOH HOH . 
G 5 HOH A 89 489 153 HOH HOH . 
G 5 HOH A 90 490 121 HOH HOH . 
G 5 HOH A 91 491 17 HOH HOH . 
G 5 HOH A 92 492 159 HOH HOH . 
G 5 HOH A 93 493 21 HOH HOH . 
G 5 HOH A 94 494 37 HOH HOH . 
G 5 HOH A 95 495 45 HOH HOH . 
G 5 HOH A 96 496 42 HOH HOH . 
G 5 HOH A 97 497 145 HOH HOH . 
G 5 HOH A 98 498 30 HOH HOH . 
G 5 HOH A 99 499 98 HOH HOH . 
G 5 HOH A 100 500 31 HOH HOH . 
G 5 HOH A 101 501 187 HOH HOH . 
G 5 HOH A 102 502 149 HOH HOH . 
G 5 HOH A 103 503 82 HOH HOH . 
G 5 HOH A 104 504 106 HOH HOH . 
G 5 HOH A 105 505 46 HOH HOH . 
G 5 HOH A 106 506 173 HOH HOH . 
G 5 HOH A 107 507 72 HOH HOH . 
G 5 HOH A 108 508 191 HOH HOH . 
G 5 HOH A 109 509 110 HOH HOH . 
G 5 HOH A 110 510 23 HOH HOH . 
G 5 HOH A 111 511 5 HOH HOH . 
G 5 HOH A 112 512 59 HOH HOH . 
G 5 HOH A 113 513 96 HOH HOH . 
G 5 HOH A 114 514 138 HOH HOH . 
G 5 HOH A 115 515 182 HOH HOH . 
G 5 HOH A 116 516 63 HOH HOH . 
G 5 HOH A 117 517 50 HOH HOH . 
G 5 HOH A 118 518 176 HOH HOH . 
G 5 HOH A 119 519 170 HOH HOH . 
G 5 HOH A 120 520 147 HOH HOH . 
G 5 HOH A 121 521 129 HOH HOH . 
G 5 HOH A 122 522 88 HOH HOH . 
G 5 HOH A 123 523 175 HOH HOH . 
G 5 HOH A 124 524 155 HOH HOH . 
G 5 HOH A 125 525 111 HOH HOH . 
G 5 HOH A 126 526 126 HOH HOH . 
G 5 HOH A 127 527 150 HOH HOH . 
G 5 HOH A 128 528 123 HOH HOH . 
G 5 HOH A 129 529 122 HOH HOH . 
G 5 HOH A 130 530 144 HOH HOH . 
G 5 HOH A 131 531 16 HOH HOH . 
G 5 HOH A 132 532 142 HOH HOH . 
G 5 HOH A 133 533 161 HOH HOH . 
G 5 HOH A 134 534 184 HOH HOH . 
G 5 HOH A 135 535 178 HOH HOH . 
G 5 HOH A 136 536 57 HOH HOH . 
G 5 HOH A 137 537 66 HOH HOH . 
G 5 HOH A 138 538 169 HOH HOH . 
G 5 HOH A 139 539 93 HOH HOH . 
G 5 HOH A 140 540 119 HOH HOH . 
G 5 HOH A 141 541 44 HOH HOH . 
G 5 HOH A 142 542 180 HOH HOH . 
G 5 HOH A 143 543 172 HOH HOH . 
G 5 HOH A 144 544 174 HOH HOH . 
G 5 HOH A 145 545 60 HOH HOH . 
G 5 HOH A 146 546 29 HOH HOH . 
G 5 HOH A 147 547 192 HOH HOH . 
G 5 HOH A 148 548 168 HOH HOH . 
G 5 HOH A 149 549 194 HOH HOH . 
G 5 HOH A 150 550 90 HOH HOH . 
G 5 HOH A 151 551 185 HOH HOH . 
G 5 HOH A 152 552 151 HOH HOH . 
G 5 HOH A 153 553 190 HOH HOH . 
G 5 HOH A 154 554 127 HOH HOH . 
G 5 HOH A 155 555 181 HOH HOH . 
G 5 HOH A 156 556 133 HOH HOH . 
G 5 HOH A 157 557 163 HOH HOH . 
G 5 HOH A 158 558 54 HOH HOH . 
G 5 HOH A 159 559 131 HOH HOH . 
G 5 HOH A 160 560 177 HOH HOH . 
G 5 HOH A 161 561 132 HOH HOH . 
G 5 HOH A 162 562 188 HOH HOH . 
G 5 HOH A 163 563 148 HOH HOH . 
G 5 HOH A 164 564 195 HOH HOH . 
G 5 HOH A 165 565 165 HOH HOH . 
G 5 HOH A 166 566 130 HOH HOH . 
G 5 HOH A 167 567 164 HOH HOH . 
G 5 HOH A 168 568 171 HOH HOH . 
G 5 HOH A 169 569 68 HOH HOH . 
G 5 HOH A 170 570 115 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . E 3 62.67 -52.077 83.85 1 82.03 ? S DMS 304 A 1 
HETATM 2 O O DMS . . . E 3 62.096 -50.768 84.337 1 49.37 ? O DMS 304 A 1 
HETATM 3 C C1 DMS . . . E 3 64.374 -52.123 83.94 1 70.91 ? C1 DMS 304 A 1 
HETATM 4 C C2 DMS . . . E 3 62.343 -53.364 84.938 1 80.7 ? C2 DMS 304 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#